RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W CDC20P26309 610 aa4.66□□□□□ -1.66
DDR48YMR173W SEC20P28791 383 aa4.66□□□□□ -1.66
DDR48YMR173W MET4P32389 672 aa4.66□□□□□ -1.66
DDR48YMR173W LST4P34239 828 aa4.66□□□□□ -1.66
DDR48YMR173W SUN4P53616 420 aa4.66□□□□□ -1.66
DDR48YMR173W EST2Q06163 884 aa4.66□□□□□ -1.66
DDR48YMR173W GAL10P04397 699 aa4.65□□□□□ -1.67
DDR48YMR173W MNN10P50108 393 aaKnown RBP4.65□□□□□ -1.67
DDR48YMR173W MCM6P53091 1017 aaKnown RBP4.65□□□□□ -1.67
DDR48YMR173W TOS4Q06266 489 aa4.65□□□□□ -1.67
DDR48YMR173W ACK1Q07622 623 aaPredicted RBP4.65□□□□□ -1.67
DDR48YMR173W OXR1Q08952 273 aa4.65□□□□□ -1.67
DDR48YMR173W NTO1Q12311 748 aa4.65□□□□□ -1.67
DDR48YMR173W PTC5Q12511 572 aa4.65□□□□□ -1.67
DDR48YMR173W CDC6P09119 513 aa4.64□□□□□ -1.67
DDR48YMR173W CMP2P14747 604 aa4.64□□□□□ -1.67
DDR48YMR173W SEC23P15303 768 aaKnown RBP4.64□□□□□ -1.67
DDR48YMR173W STE11P23561 717 aa4.64□□□□□ -1.67
DDR48YMR173W RSM24Q03976 319 aa4.64□□□□□ -1.67
DDR48YMR173W TMA10Q06177 86 aa4.64□□□□□ -1.67
DDR48YMR173W RXT3Q07458 294 aa4.64□□□□□ -1.67
DDR48YMR173W WHI5Q12416 295 aa4.64□□□□□ -1.67
DDR48YMR173W RPN3P40016 523 aaKnown RBP4.63□□□□□ -1.67
DDR48YMR173W THI12P42883 340 aa4.63□□□□□ -1.67
DDR48YMR173W THI5P43534 340 aa4.63□□□□□ -1.67
DDR48YMR173W THI11P47183 340 aa4.63□□□□□ -1.67
DDR48YMR173W SEN54Q02825 467 aaPredicted RBP4.63□□□□□ -1.67
DDR48YMR173W ADI1Q03677 179 aa4.63□□□□□ -1.67
DDR48YMR173W THI13Q07748 340 aa4.63□□□□□ -1.67
DDR48YMR173W GPB1Q08886 897 aa4.63□□□□□ -1.67
DDR48YMR173W PMI40P29952 429 aaKnown RBP4.62□□□□□ -1.67
DDR48YMR173W ALG3P38179 458 aa4.62□□□□□ -1.67
DDR48YMR173W DAK2P43550 591 aa4.62□□□□□ -1.67
DDR48YMR173W CTF4Q01454 927 aa4.62□□□□□ -1.67
DDR48YMR173W YPL109CQ02981 657 aa4.62□□□□□ -1.67
DDR48YMR173W RFC5P38251 354 aa4.61□□□□□ -1.67
DDR48YMR173W PHO23P50947 330 aa4.61□□□□□ -1.67
DDR48YMR173W RIB2Q12362 591 aaKnown RBP4.61□□□□□ -1.67
DDR48YMR173W HXK1P04806 485 aaKnown RBP4.6□□□□□ -1.67
DDR48YMR173W CHS7P38843 316 aa4.6□□□□□ -1.67
DDR48YMR173W AIM21P40563 679 aa4.6□□□□□ -1.67
DDR48YMR173W YFL054CP43549 646 aa4.6□□□□□ -1.67
DDR48YMR173W YPL260WQ08977 551 aa4.6□□□□□ -1.67
DDR48YMR173W DED1P06634 604 aaKnown RBP4.59□□□□□ -1.67
DDR48YMR173W TAF13P11747 167 aa4.59□□□□□ -1.67
DDR48YMR173W VPS62P53285 467 aa4.59□□□□□ -1.67
DDR48YMR173W PBP1P53297 722 aaKnown RBP4.59□□□□□ -1.67
DDR48YMR173W RAD53P22216 821 aa4.58□□□□□ -1.68
DDR48YMR173W PIC2P40035 300 aa4.58□□□□□ -1.68
DDR48YMR173W YML122CQ03207 126 aa4.58□□□□□ -1.68
DDR48YMR173W YAP6Q03935 383 aa4.58□□□□□ -1.68
DDR48YMR173W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.58□□□□□ -1.68not detected
DDR48YMR173W PMA1P05030 918 aaKnown RBP4.57□□□□□ -1.68
DDR48YMR173W RPT1P33299 467 aaKnown RBP4.57□□□□□ -1.68
DDR48YMR173W SLD2P34252 453 aa4.57□□□□□ -1.68
DDR48YMR173W IPL1P38991 367 aa4.57□□□□□ -1.68
DDR48YMR173W FAA3P39002 694 aa4.57□□□□□ -1.68
DDR48YMR173W YLR224WQ05947 369 aa4.57□□□□□ -1.68
DDR48YMR173W URN1Q06525 465 aaKnown RBP4.57□□□□□ -1.68
DDR48YMR173W NOP8Q08287 484 aaPredicted RBP4.57□□□□□ -1.68
DDR48YMR173W YGR122WP53272 402 aa4.56□□□□□ -1.68
DDR48YMR173W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.56□□□□□ -1.68not detected
DDR48YMR173W RAT1Q02792 1006 aaKnown RBP4.56□□□□□ -1.68
DDR48YMR173W SVS1Q12254 260 aa4.56□□□□□ -1.68
DDR48YMR173W KIN2P13186 1147 aaKnown RBP4.55□□□□□ -1.68
DDR48YMR173W DCG1P32460 244 aa4.55□□□□□ -1.68
DDR48YMR173W ENT3P47160 408 aa4.55□□□□□ -1.68
DDR48YMR173W GTF1P53260 183 aaPredicted RBP4.55□□□□□ -1.68
DDR48YMR173W KIN4Q01919 800 aa4.55□□□□□ -1.68
DDR48YMR173W SIZ1Q04195 904 aa4.55□□□□□ -1.68
DDR48YMR173W HMI1Q12039 706 aa4.55□□□□□ -1.68
DDR48YMR173W EMC1P25574 760 aa4.54□□□□□ -1.68
DDR48YMR173W APL1P27351 700 aa4.54□□□□□ -1.68
DDR48YMR173W DEF1P35732 738 aaKnown RBP4.54□□□□□ -1.68
DDR48YMR173W GCV2P49095 1034 aa4.54□□□□□ -1.68
DDR48YMR173W MCD1Q12158 566 aa4.54□□□□□ -1.68
DDR48YMR173W MSS4P38994 779 aa4.53□□□□□ -1.68
DDR48YMR173W ROD1Q02805 837 aa4.53□□□□□ -1.68
DDR48YMR173W RRP15Q06511 250 aaPredicted RBP4.53□□□□□ -1.68
DDR48YMR173W YER152CP10356 443 aa4.52□□□□□ -1.69
DDR48YMR173W PRE9P23638 258 aaKnown RBP4.52□□□□□ -1.69
DDR48YMR173W YJR107WP47145 328 aa4.52□□□□□ -1.69
DDR48YMR173W NOP12Q08208 459 aaKnown RBP4.52□□□□□ -1.69
DDR48YMR173W MKK2P32491 506 aa4.51□□□□□ -1.69
DDR48YMR173W SIP5P40210 489 aaKnown RBP4.51□□□□□ -1.69
DDR48YMR173W MRPS18P42847 217 aa4.51□□□□□ -1.69
DDR48YMR173W MSC2Q03455 724 aa4.51□□□□□ -1.69
DDR48YMR173W YML020WQ03722 664 aa4.51□□□□□ -1.69
DDR48YMR173W ATG13Q06628 738 aa4.51□□□□□ -1.69
DDR48YMR173W RAD2P07276 1031 aa4.5□□□□□ -1.69
DDR48YMR173W CYC8P14922 966 aa4.5□□□□□ -1.69
DDR48YMR173W HEM3P28789 327 aa4.5□□□□□ -1.69
DDR48YMR173W RGD1P38339 666 aa4.5□□□□□ -1.69
DDR48YMR173W GNP1P48813 663 aa4.5□□□□□ -1.69
DDR48YMR173W SIW14P53965 281 aa4.5□□□□□ -1.69
DDR48YMR173W MGE1P38523 228 aa4.49□□□□□ -1.69
DDR48YMR173W PLB1P39105 664 aa4.49□□□□□ -1.69
DDR48YMR173W MLS1P30952 554 aa4.48□□□□□ -1.69
DDR48YMR173W HXT13P39924 564 aa4.48□□□□□ -1.69
DDR48YMR173W POL32P47110 350 aa4.48□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms