RNA–Protein interactions for RNA: YMR048W

CSM3, Transcript of Replication fork associated factor, yeastyeast

Gene CSM3, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM3YMR048W SPO21Q12411 609 aa6.36□□□□□ -1.39
CSM3YMR048W ATE1P16639 503 aa6.35□□□□□ -1.39
CSM3YMR048W RGD1P38339 666 aa6.35□□□□□ -1.39
CSM3YMR048W GPB2P39717 880 aa6.35□□□□□ -1.39
CSM3YMR048W GNP1P48813 663 aa6.35□□□□□ -1.39
CSM3YMR048W RSB1Q08417 382 aa6.35□□□□□ -1.39
CSM3YMR048W SNF5P18480 905 aa6.34□□□□□ -1.39
CSM3YMR048W PUF4P25339 888 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
CSM3YMR048W YKL222CP35995 705 aa6.34□□□□□ -1.39
CSM3YMR048W HXT13P39924 564 aa6.34□□□□□ -1.39
CSM3YMR048W SEC26P41810 973 aaKnown RBP6.34□□□□□ -1.39
CSM3YMR048W HNT2P49775 206 aa6.34□□□□□ -1.39
CSM3YMR048W HXT17P53631 564 aa6.34□□□□□ -1.39
CSM3YMR048W HXT15P54854 567 aa6.34□□□□□ -1.39
CSM3YMR048W RAT1Q02792 1006 aaKnown RBP6.34□□□□□ -1.39
CSM3YMR048W RRP15Q06511 250 aaPredicted RBP6.34□□□□□ -1.39
CSM3YMR048W MRL1Q06815 381 aa6.34□□□□□ -1.39
CSM3YMR048W SYP1P25623 870 aaKnown RBP6.33□□□□□ -1.4
CSM3YMR048W MCM2P29469 868 aa6.33□□□□□ -1.4
CSM3YMR048W ESF1Q06344 628 aaKnown RBP6.33□□□□□ -1.4
CSM3YMR048W RPS13P05756 151 aaKnown RBP6.32□□□□□ -1.4
CSM3YMR048W GCR1P07261 785 aa6.32□□□□□ -1.4
CSM3YMR048W ASF1P32447 279 aa6.32□□□□□ -1.4
CSM3YMR048W CNN1P43618 361 aa6.32□□□□□ -1.4
CSM3YMR048W YOR352WQ08816 343 aa6.32□□□□□ -1.4
CSM3YMR048W YPL277CQ08989 487 aa6.32□□□□□ -1.4
CSM3YMR048W FLR1P38124 548 aa6.31□□□□□ -1.4
CSM3YMR048W GIP4P39732 760 aa6.31□□□□□ -1.4
CSM3YMR048W RMD1Q03441 430 aa6.31□□□□□ -1.4
CSM3YMR048W DBP5P20449 482 aaKnown RBP6.3□□□□□ -1.4
CSM3YMR048W FYV10P40492 516 aa6.3□□□□□ -1.4
CSM3YMR048W TAF1P46677 1066 aa6.3□□□□□ -1.4
CSM3YMR048W SPR28Q04921 423 aa6.3□□□□□ -1.4
CSM3YMR048W SGD1Q06132 899 aa6.3□□□□□ -1.4
CSM3YMR048W RAD27P26793 382 aa6.29□□□□□ -1.4
CSM3YMR048W TOD6P34219 525 aa6.29□□□□□ -1.4
CSM3YMR048W RTT10Q08924 1013 aa6.28□□□□□ -1.4
CSM3YMR048W YER152CP10356 443 aa6.27□□□□□ -1.41
CSM3YMR048W MLS1P30952 554 aa6.27□□□□□ -1.41
CSM3YMR048W LAM1P38851 1228 aa6.27□□□□□ -1.41
CSM3YMR048W TMA46Q12000 345 aaKnown RBP6.27□□□□□ -1.41
CSM3YMR048W YLR358CO13565 187 aa6.26□□□□□ -1.41
CSM3YMR048W CYC1P00044 109 aaPredicted RBP6.26□□□□□ -1.41
CSM3YMR048W PEP7P32609 515 aa6.26□□□□□ -1.41
CSM3YMR048W ABZ1P37254 787 aaPredicted RBP6.26□□□□□ -1.41
CSM3YMR048W MPH1P40562 993 aa6.26□□□□□ -1.41
CSM3YMR048W YDR132CQ03900 495 aa6.26□□□□□ -1.41
CSM3YMR048W RSM24Q03976 319 aa6.26□□□□□ -1.41
CSM3YMR048W PRE10P21242 288 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41not detected
CSM3YMR048W RER2P35196 286 aa6.25□□□□□ -1.41
CSM3YMR048W RFC5P38251 354 aa6.25□□□□□ -1.41
CSM3YMR048W MEF2P39677 819 aa6.25□□□□□ -1.41
CSM3YMR048W GCN5Q03330 439 aa6.24□□□□□ -1.41
CSM3YMR048W ATG13Q06628 738 aa6.24□□□□□ -1.41
CSM3YMR048W GNT1Q12096 491 aa6.24□□□□□ -1.41
CSM3YMR048W CLU1Q03690 1277 aaKnown RBP6.23□□□□□ -1.41
CSM3YMR048W TIF35Q04067 274 aaKnown RBP6.23□□□□□ -1.41
CSM3YMR048W KIN2P13186 1147 aaKnown RBP6.22□□□□□ -1.41
CSM3YMR048W DOM34P33309 386 aa6.22□□□□□ -1.41
CSM3YMR048W YFL054CP43549 646 aa6.22□□□□□ -1.41
CSM3YMR048W SPT20P50875 604 aa6.22□□□□□ -1.41
CSM3YMR048W SVS1Q12254 260 aa6.22□□□□□ -1.41
CSM3YMR048W BAS1P22035 811 aa6.21□□□□□ -1.42
CSM3YMR048W MCM7P38132 845 aa6.21□□□□□ -1.42
CSM3YMR048W OYE2Q03558 400 aaKnown RBP6.21□□□□□ -1.42
CSM3YMR048W GAL10P04397 699 aa6.19□□□□□ -1.42
CSM3YMR048W LYP1P32487 611 aa6.19□□□□□ -1.42
CSM3YMR048W GEM1P39722 662 aa6.19□□□□□ -1.42
CSM3YMR048W PBP1P53297 722 aaKnown RBP6.19□□□□□ -1.42
CSM3YMR048W PLB2Q03674 706 aa6.19□□□□□ -1.42
CSM3YMR048W ROT1Q03691 256 aa6.19□□□□□ -1.42
CSM3YMR048W DUS4Q06063 367 aa6.19□□□□□ -1.42
CSM3YMR048W ACM1Q08981 209 aa6.19□□□□□ -1.42
CSM3YMR048W THS1P04801 734 aaKnown RBP6.18□□□□□ -1.42
CSM3YMR048W RPL11AP0C0W9 174 aaKnown RBP6.18□□□□□ -1.42
CSM3YMR048W CDC34P14682 295 aa6.18□□□□□ -1.42
CSM3YMR048W CMP2P14747 604 aa6.18□□□□□ -1.42
CSM3YMR048W SRM1P21827 482 aa6.18□□□□□ -1.42
CSM3YMR048W APL1P27351 700 aa6.18□□□□□ -1.42
CSM3YMR048W DUT1P33317 147 aa6.18□□□□□ -1.42
CSM3YMR048W PET112P33893 541 aa6.18□□□□□ -1.42
CSM3YMR048W MNR2P35724 969 aa6.18□□□□□ -1.42
CSM3YMR048W TAT2P38967 592 aa6.18□□□□□ -1.42
CSM3YMR048W SIZ1Q04195 904 aa6.18□□□□□ -1.42
CSM3YMR048W RPL11BQ3E757 174 aaPredicted RBP6.18□□□□□ -1.42
CSM3YMR048W UGA2P38067 497 aa6.17□□□□□ -1.42
CSM3YMR048W RRT14P40470 206 aa6.17□□□□□ -1.42
CSM3YMR048W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
CSM3YMR048W GSF2Q04697 403 aaKnown RBP6.17□□□□□ -1.42
CSM3YMR048W RIB2Q12362 591 aaKnown RBP6.17□□□□□ -1.42
CSM3YMR048W TRP2P00899 507 aaKnown RBP6.16□□□□□ -1.42
CSM3YMR048W ACE2P21192 770 aa6.16□□□□□ -1.42
CSM3YMR048W PNT1P38969 423 aa6.16□□□□□ -1.42
CSM3YMR048W MPT5P39016 859 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
CSM3YMR048W MXR1P40029 184 aa6.16□□□□□ -1.42
CSM3YMR048W SPP382Q06411 708 aaPredicted RBP6.16□□□□□ -1.42
CSM3YMR048W RXT3Q07458 294 aa6.16□□□□□ -1.42
CSM3YMR048W CTS1P29029 562 aa6.15□□□□□ -1.42
CSM3YMR048W SHM2P37291 469 aaKnown RBP6.15□□□□□ -1.42
CSM3YMR048W MET10P39692 1035 aa6.15□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 53.6 ms