RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W TNA1P53322 534 aa4.49□□□□□ -1.69
CTK3YML112W RMD1Q03441 430 aa4.49□□□□□ -1.69
CTK3YML112W NBA1Q08229 501 aaKnown RBP4.49□□□□□ -1.69
CTK3YML112W YPL260WQ08977 551 aa4.49□□□□□ -1.69
CTK3YML112W SPO21Q12411 609 aa4.49□□□□□ -1.69
CTK3YML112W COQ4O13525 335 aa4.48□□□□□ -1.69
CTK3YML112W SYP1P25623 870 aaKnown RBP4.48□□□□□ -1.69
CTK3YML112W RAD27P26793 382 aa4.48□□□□□ -1.69
CTK3YML112W TSA1P34760 196 aaKnown RBP4.48□□□□□ -1.69
CTK3YML112W BAP2P38084 609 aa4.48□□□□□ -1.69
CTK3YML112W ETP1P38748 585 aaKnown RBP4.48□□□□□ -1.69
CTK3YML112W RTT10Q08924 1013 aa4.48□□□□□ -1.69
CTK3YML112W RER2P35196 286 aa4.47□□□□□ -1.69
CTK3YML112W CCZ1P38273 704 aa4.47□□□□□ -1.69
CTK3YML112W RPN3P40016 523 aaKnown RBP4.47□□□□□ -1.69
CTK3YML112W MRPL22P53881 309 aa4.47□□□□□ -1.69
CTK3YML112W CDA2Q06703 312 aa4.47□□□□□ -1.69
CTK3YML112W RSB1Q08417 382 aa4.47□□□□□ -1.69
CTK3YML112W YDL177CQ12257 170 aa4.47□□□□□ -1.69
CTK3YML112W SPS1P08458 490 aa4.46□□□□□ -1.7
CTK3YML112W PUF4P25339 888 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
CTK3YML112W MLS1P30952 554 aa4.46□□□□□ -1.7
CTK3YML112W RGD1P38339 666 aa4.46□□□□□ -1.7
CTK3YML112W CNN1P43618 361 aa4.46□□□□□ -1.7
CTK3YML112W YER152CP10356 443 aa4.45□□□□□ -1.7
CTK3YML112W SNF5P18480 905 aa4.45□□□□□ -1.7
CTK3YML112W DBP5P20449 482 aaKnown RBP4.45□□□□□ -1.7
CTK3YML112W PIK1P39104 1066 aa4.45□□□□□ -1.7
CTK3YML112W TMA46Q12000 345 aaKnown RBP4.45□□□□□ -1.7
CTK3YML112W SEC26P41810 973 aaKnown RBP4.44□□□□□ -1.7
CTK3YML112W PET112P33893 541 aa4.43□□□□□ -1.7
CTK3YML112W THI80P35202 319 aa4.43□□□□□ -1.7
CTK3YML112W MPH1P40562 993 aa4.43□□□□□ -1.7
CTK3YML112W YFL054CP43549 646 aa4.43□□□□□ -1.7
CTK3YML112W ENV11P53246 860 aa4.43□□□□□ -1.7
CTK3YML112W SNO2P53823 222 aa4.43□□□□□ -1.7
CTK3YML112W TIF35Q04067 274 aaKnown RBP4.43□□□□□ -1.7
CTK3YML112W CDC34P14682 295 aa4.42□□□□□ -1.7
CTK3YML112W DUT1P33317 147 aa4.42□□□□□ -1.7
CTK3YML112W MCM7P38132 845 aa4.42□□□□□ -1.7
CTK3YML112W AIM3P38266 947 aaKnown RBP4.42□□□□□ -1.7
CTK3YML112W PRP6P19735 899 aaPredicted RBP4.41□□□□□ -1.7
CTK3YML112W MNR2P35724 969 aa4.41□□□□□ -1.7
CTK3YML112W ABZ1P37254 787 aaPredicted RBP4.41□□□□□ -1.7
CTK3YML112W HNT2P49775 206 aa4.41□□□□□ -1.7
CTK3YML112W LYP1P32487 611 aa4.4□□□□□ -1.71
CTK3YML112W RFC5P38251 354 aa4.4□□□□□ -1.71
CTK3YML112W TYW3P53177 273 aa4.4□□□□□ -1.71
CTK3YML112W RIM8P53179 542 aa4.4□□□□□ -1.71
CTK3YML112W NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71not detected
CTK3YML112W YOR352WQ08816 343 aa4.4□□□□□ -1.71
CTK3YML112W YPL277CQ08989 487 aa4.4□□□□□ -1.71
CTK3YML112W CYC1P00044 109 aaPredicted RBP4.39□□□□□ -1.71
CTK3YML112W SOD2P00447 233 aa4.39□□□□□ -1.71
CTK3YML112W TRP2P00899 507 aaKnown RBP4.39□□□□□ -1.71
CTK3YML112W RPS13P05756 151 aaKnown RBP4.39□□□□□ -1.71
CTK3YML112W MET10P39692 1035 aa4.39□□□□□ -1.71
CTK3YML112W MXR1P40029 184 aa4.39□□□□□ -1.71
CTK3YML112W EEB1Q02891 456 aa4.39□□□□□ -1.71
CTK3YML112W RSM24Q03976 319 aa4.39□□□□□ -1.71
CTK3YML112W SGD1Q06132 899 aa4.39□□□□□ -1.71
CTK3YML112W GNT1Q12096 491 aa4.39□□□□□ -1.71
CTK3YML112W RPL11AP0C0W9 174 aaKnown RBP4.38□□□□□ -1.71
CTK3YML112W BAS1P22035 811 aa4.38□□□□□ -1.71
CTK3YML112W DBP2P24783 546 aaKnown RBP4.38□□□□□ -1.71
CTK3YML112W TOD6P34219 525 aa4.38□□□□□ -1.71
CTK3YML112W LAM1P38851 1228 aa4.38□□□□□ -1.71
CTK3YML112W SVS1Q12254 260 aa4.38□□□□□ -1.71
CTK3YML112W RPL11BQ3E757 174 aaPredicted RBP4.38□□□□□ -1.71
CTK3YML112W INO1P11986 533 aa4.37□□□□□ -1.71
CTK3YML112W MOT2P34909 587 aaKnown RBP4.37□□□□□ -1.71
CTK3YML112W MEF2P39677 819 aa4.37□□□□□ -1.71
CTK3YML112W GEM1P39722 662 aa4.37□□□□□ -1.71
CTK3YML112W YGR053CP53234 283 aa4.37□□□□□ -1.71
CTK3YML112W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
CTK3YML112W SPP382Q06411 708 aaPredicted RBP4.37□□□□□ -1.71
CTK3YML112W ACM1Q08981 209 aa4.37□□□□□ -1.71
CTK3YML112W KIN2P13186 1147 aaKnown RBP4.36□□□□□ -1.71
CTK3YML112W APL1P27351 700 aa4.36□□□□□ -1.71
CTK3YML112W UGA2P38067 497 aa4.36□□□□□ -1.71
CTK3YML112W PNT1P38969 423 aa4.36□□□□□ -1.71
CTK3YML112W PLB2Q03674 706 aa4.36□□□□□ -1.71
CTK3YML112W ROT1Q03691 256 aa4.36□□□□□ -1.71
CTK3YML112W YLR225CQ05948 407 aaKnown RBP4.36□□□□□ -1.71
CTK3YML112W ATG13Q06628 738 aa4.36□□□□□ -1.71
CTK3YML112W CMP2P14747 604 aa4.35□□□□□ -1.71
CTK3YML112W SRM1P21827 482 aa4.35□□□□□ -1.71
CTK3YML112W FLR1P38124 548 aa4.35□□□□□ -1.71
CTK3YML112W YGL176CP46945 554 aa4.35□□□□□ -1.71
CTK3YML112W GDE1Q02979 1223 aa4.35□□□□□ -1.71
CTK3YML112W SPO20Q04359 397 aa4.35□□□□□ -1.71
CTK3YML112W YPL066WQ12194 479 aa4.35□□□□□ -1.71
CTK3YML112W RKM4Q12504 494 aa4.35□□□□□ -1.71
CTK3YML112W BI4P03879 638 aa4.34□□□□□ -1.71
CTK3YML112W GAL10P04397 699 aa4.34□□□□□ -1.71
CTK3YML112W CLN2P20438 545 aa4.34□□□□□ -1.71
CTK3YML112W SLA2P33338 968 aa4.34□□□□□ -1.71
CTK3YML112W MAD1P40957 749 aa4.34□□□□□ -1.71
CTK3YML112W FAA4P47912 694 aaKnown RBP4.34□□□□□ -1.71
CTK3YML112W SPT20P50875 604 aa4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms