RNA–Protein interactions for RNA: YML001W

YPT7, Transcript of Rab family GTPase, yeast

Gene YPT7, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT7	YML001W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
YPT7	YML001W	LRG1	P35688	1017 aa		4.98	□□□□□ -1.61
YPT7	YML001W	IRC24	P40580	263 aa		4.98	□□□□□ -1.61
YPT7	YML001W	PUS7	Q08647	676 aa	Known RBP	4.98	□□□□□ -1.61
YPT7	YML001W	YBT1	P32386	1661 aa		4.97	□□□□□ -1.61
YPT7	YML001W	VPS15	P22219	1454 aa		4.97	□□□□□ -1.61
YPT7	YML001W	PIC2	P40035	300 aa		4.97	□□□□□ -1.61
YPT7	YML001W	YGR122W	P53272	402 aa		4.97	□□□□□ -1.61
YPT7	YML001W	ORC3	P54790	616 aa		4.97	□□□□□ -1.61
YPT7	YML001W	YML020W	Q03722	664 aa		4.97	□□□□□ -1.61
YPT7	YML001W	RKM2	Q03942	479 aa		4.97	□□□□□ -1.61
YPT7	YML001W	RSA3	Q05942	220 aa	Known RBP	4.97	□□□□□ -1.61
YPT7	YML001W	YLR257W	Q06146	321 aa	Known RBP	4.97	□□□□□ -1.61
YPT7	YML001W	TRE1	Q08919	783 aa		4.97	□□□□□ -1.61
YPT7	YML001W	NUP170	P38181	1502 aa		4.97	□□□□□ -1.61
YPT7	YML001W	HSP78	P33416	811 aa		4.96	□□□□□ -1.62
YPT7	YML001W	TPP1	Q03796	238 aa		4.96	□□□□□ -1.62
YPT7	YML001W	LPX1	Q12405	387 aa	Known RBP	4.96	□□□□□ -1.62
YPT7	YML001W	DFG16	Q99234	619 aa		4.96	□□□□□ -1.62
YPT7	YML001W	RPA190	P10964	1664 aa	Known RBP	4.96	□□□□□ -1.62
YPT7	YML001W	DNF1	P32660	1571 aa		4.95	□□□□□ -1.62
YPT7	YML001W	GEA2	P39993	1459 aa	Known RBP	4.95	□□□□□ -1.62
YPT7	YML001W	RPO21	P04050	1733 aa	Known RBP	4.95	□□□□□ -1.62
YPT7	YML001W	RET1	P22276	1149 aa	Known RBP	4.95	□□□□□ -1.62
YPT7	YML001W	ADP1	P25371	1049 aa		4.95	□□□□□ -1.62
YPT7	YML001W	SLD2	P34252	453 aa		4.95	□□□□□ -1.62
YPT7	YML001W	POL12	P38121	705 aa	Predicted RBP	4.95	□□□□□ -1.62
YPT7	YML001W	ECL1	P48235	211 aa		4.95	□□□□□ -1.62
YPT7	YML001W	RRP15	Q06511	250 aa	Predicted RBP	4.95	□□□□□ -1.62
YPT7	YML001W	SAM35	P14693	329 aa		4.94	□□□□□ -1.62
YPT7	YML001W	SEG2	P34250	1132 aa		4.94	□□□□□ -1.62
YPT7	YML001W	ADD66	P36040	267 aa		4.94	□□□□□ -1.62
YPT7	YML001W	HSE1	P38753	452 aa		4.94	□□□□□ -1.62
YPT7	YML001W	SSY1	Q03770	852 aa		4.94	□□□□□ -1.62
YPT7	YML001W	HRK1	Q08732	759 aa	Known RBP	4.94	□□□□□ -1.62
YPT7	YML001W	LAP2	Q10740	671 aa		4.94	□□□□□ -1.62
YPT7	YML001W	MCD1	Q12158	566 aa		4.94	□□□□□ -1.62
YPT7	YML001W	SNT2	P53127	1403 aa		4.94	□□□□□ -1.62
YPT7	YML001W	TAF13	P11747	167 aa		4.93	□□□□□ -1.62
YPT7	YML001W	ATE1	P16639	503 aa		4.93	□□□□□ -1.62
YPT7	YML001W	PRE9	P23638	258 aa	Known RBP	4.93	□□□□□ -1.62
YPT7	YML001W	PRO1	P32264	428 aa		4.93	□□□□□ -1.62
YPT7	YML001W	AFG2	P32794	780 aa		4.93	□□□□□ -1.62
YPT7	YML001W	NMD3	P38861	518 aa	Known RBP	4.93	□□□□□ -1.62
YPT7	YML001W	YJR107W	P47145	328 aa		4.93	□□□□□ -1.62
YPT7	YML001W	ORC1	P54784	914 aa	Predicted RBP	4.93	□□□□□ -1.62
YPT7	YML001W	NUP159	P40477	1460 aa		4.93	□□□□□ -1.62
YPT7	YML001W	GDB1	Q06625	1536 aa		4.92	□□□□□ -1.62
YPT7	YML001W	CYC8	P14922	966 aa		4.92	□□□□□ -1.62
YPT7	YML001W	QNS1	P38795	714 aa	Known RBP	4.92	□□□□□ -1.62
YPT7	YML001W	NIT1	P40447	199 aa		4.92	□□□□□ -1.62
YPT7	YML001W	YJL045W	P47052	634 aa		4.92	□□□□□ -1.62
YPT7	YML001W	VPS53	P47061	822 aa		4.92	□□□□□ -1.62
YPT7	YML001W	POL32	P47110	350 aa		4.92	□□□□□ -1.62
YPT7	YML001W	BUD3	P25558	1636 aa		4.92	□□□□□ -1.62
YPT7	YML001W	CAT8	P39113	1433 aa		4.91	□□□□□ -1.62
YPT7	YML001W	RAD2	P07276	1031 aa		4.91	□□□□□ -1.62
YPT7	YML001W	TSA1	P34760	196 aa	Known RBP	4.91	□□□□□ -1.62
YPT7	YML001W	YHL012W	P38709	493 aa		4.91	□□□□□ -1.62
YPT7	YML001W	PTC7	P38797	343 aa		4.91	□□□□□ -1.62
YPT7	YML001W	GNP1	P48813	663 aa		4.91	□□□□□ -1.62
YPT7	YML001W	NOP7	P53261	605 aa	Known RBP	4.91	□□□□□ -1.62
YPT7	YML001W	YNR063W	P53749	607 aa		4.91	□□□□□ -1.62
YPT7	YML001W	EST2	Q06163	884 aa		4.91	□□□□□ -1.62
YPT7	YML001W	BUD21	Q08492	214 aa	Predicted RBP	4.91	□□□□□ -1.62
YPT7	YML001W	ARO1	P08566	1588 aa	Known RBP	4.91	□□□□□ -1.62
YPT7	YML001W	IRC20	Q06554	1556 aa		4.91	□□□□□ -1.62
YPT7	YML001W	RNQ1	P25367	405 aa		4.9	□□□□□ -1.63
YPT7	YML001W	ATG14	P38270	344 aa		4.9	□□□□□ -1.63
YPT7	YML001W	RPS26A	P39938	119 aa	Known RBP	4.9	□□□□□ -1.63
YPT7	YML001W	RPS26B	P39939	119 aa	Known RBP	4.9	□□□□□ -1.63
YPT7	YML001W	MRPS18	P42847	217 aa		4.9	□□□□□ -1.63
YPT7	YML001W	ENT3	P47160	408 aa		4.9	□□□□□ -1.63
YPT7	YML001W	HDA2	Q06629	674 aa		4.9	□□□□□ -1.63
YPT7	YML001W	CDA2	Q06703	312 aa		4.9	□□□□□ -1.63
YPT7	YML001W	NUP157	P40064	1391 aa	Known RBP	4.9	□□□□□ -1.63
YPT7	YML001W	SRB8	P25648	1427 aa		4.89	□□□□□ -1.63
YPT7	YML001W	SRO9	P25567	434 aa	Known RBP	4.89	□□□□□ -1.63
YPT7	YML001W	MDL2	P33311	773 aa		4.89	□□□□□ -1.63
YPT7	YML001W	MGE1	P38523	228 aa		4.89	□□□□□ -1.63
YPT7	YML001W	HXT13	P39924	564 aa		4.89	□□□□□ -1.63
YPT7	YML001W	FYV10	P40492	516 aa		4.89	□□□□□ -1.63
YPT7	YML001W	GTS1	P40956	396 aa		4.89	□□□□□ -1.63
YPT7	YML001W	HXT17	P53631	564 aa		4.89	□□□□□ -1.63
YPT7	YML001W	HXT15	P54854	567 aa		4.89	□□□□□ -1.63
YPT7	YML001W	SPO14	P36126	1683 aa		4.89	□□□□□ -1.63
YPT7	YML001W	MCM2	P29469	868 aa		4.88	□□□□□ -1.63
YPT7	YML001W	YSC84	P32793	468 aa		4.88	□□□□□ -1.63
YPT7	YML001W	ALG3	P38179	458 aa		4.88	□□□□□ -1.63
YPT7	YML001W	MET10	P39692	1035 aa		4.88	□□□□□ -1.63
YPT7	YML001W	SIW14	P53965	281 aa		4.88	□□□□□ -1.63
YPT7	YML001W	YDL177C	Q12257	170 aa		4.88	□□□□□ -1.63
YPT7	YML001W	PDR10	P51533	1564 aa		4.87	□□□□□ -1.63
YPT7	YML001W	GAS1	P22146	559 aa	Known RBP	4.87	□□□□□ -1.63
YPT7	YML001W	HEM3	P28789	327 aa		4.87	□□□□□ -1.63
YPT7	YML001W	NOP2	P40991	618 aa	Known RBP	4.87	□□□□□ -1.63
YPT7	YML001W	PRP43	P53131	767 aa	Known RBP	4.87	□□□□□ -1.63
YPT7	YML001W	ROD1	Q02805	837 aa		4.87	□□□□□ -1.63
YPT7	YML001W	SPR28	Q04921	423 aa		4.87	□□□□□ -1.63
YPT7	YML001W	PTC5	Q12511	572 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 167.1 ms