RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeastyeast

Gene CCC1, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCC1YLR220W BUL2Q03758 920 aaKnown RBP17.48■□□□□ 0.39
CCC1YLR220W AIM33Q04516 312 aa17.48■□□□□ 0.39
CCC1YLR220W MMR1Q06324 491 aa17.48■□□□□ 0.39
CCC1YLR220W SRP40P32583 406 aaPredicted RBP17.47■□□□□ 0.39
CCC1YLR220W SEC8P32855 1065 aa17.47■□□□□ 0.39
CCC1YLR220W ISW1P38144 1129 aa17.47■□□□□ 0.39
CCC1YLR220W SES1P07284 462 aaKnown RBP17.46■□□□□ 0.39
CCC1YLR220W DBP7P36120 742 aaKnown RBP17.46■□□□□ 0.39
CCC1YLR220W CTR1P49573 406 aa17.46■□□□□ 0.39
CCC1YLR220W MFM1Q02783 413 aa17.46■□□□□ 0.39
CCC1YLR220W RGT1P32862 1170 aa17.45■□□□□ 0.38
CCC1YLR220W ORC6P38826 435 aa17.45■□□□□ 0.38
CCC1YLR220W COG8Q04632 607 aa17.45■□□□□ 0.38
CCC1YLR220W UBP11P36026 717 aa17.44■□□□□ 0.38
CCC1YLR220W THI6P41835 540 aa17.44■□□□□ 0.38
CCC1YLR220W SLD5Q03406 294 aa17.44■□□□□ 0.38
CCC1YLR220W RKM4Q12504 494 aa17.44■□□□□ 0.38
CCC1YLR220W PRE10P21242 288 aaKnown RBP RIP-Chip data17.43■□□□□ 0.38not detected
CCC1YLR220W MCM4P30665 933 aaKnown RBP17.43■□□□□ 0.38
CCC1YLR220W REG2P38232 338 aa17.43■□□□□ 0.38
CCC1YLR220W KRE33P53914 1056 aaKnown RBP17.43■□□□□ 0.38
CCC1YLR220W RPL22AP05749 121 aaKnown RBP17.42■□□□□ 0.38
CCC1YLR220W BMH1P29311 267 aaKnown RBP17.42■□□□□ 0.38
CCC1YLR220W EAF7P53911 425 aaKnown RBP17.42■□□□□ 0.38
CCC1YLR220W PHM6Q05637 104 aa17.42■□□□□ 0.38
CCC1YLR220W APC11Q12157 165 aa17.42■□□□□ 0.38
CCC1YLR220W FOB1O13329 566 aa17.41■□□□□ 0.38
CCC1YLR220W ESS1P22696 170 aa17.41■□□□□ 0.38
CCC1YLR220W ROX1P25042 368 aa17.41■□□□□ 0.38
CCC1YLR220W TFC4P33339 1025 aa17.41■□□□□ 0.38
CCC1YLR220W GPD2P41911 440 aaKnown RBP17.41■□□□□ 0.38
CCC1YLR220W SDA1P53313 767 aaKnown RBP17.41■□□□□ 0.38
CCC1YLR220W YMR321CQ04898 105 aa17.41■□□□□ 0.38
CCC1YLR220W FUS2Q05670 677 aa17.41■□□□□ 0.38
CCC1YLR220W ETT1Q08421 412 aaKnown RBP17.41■□□□□ 0.38
CCC1YLR220W ILV1P00927 576 aaKnown RBP17.4■□□□□ 0.38
CCC1YLR220W GSY1P23337 708 aa17.4■□□□□ 0.38
CCC1YLR220W CLB5P30283 435 aa17.4■□□□□ 0.38
CCC1YLR220W RSM25P40496 264 aa17.4■□□□□ 0.38
CCC1YLR220W ROG3P43602 733 aa17.4■□□□□ 0.38
CCC1YLR220W YPT11P48559 417 aa17.4■□□□□ 0.38
CCC1YLR220W CNM67P53865 581 aaKnown RBP17.4■□□□□ 0.38
CCC1YLR220W MET7Q08645 548 aa17.4■□□□□ 0.38
CCC1YLR220W TUF1P02992 437 aaKnown RBP17.39■□□□□ 0.37
CCC1YLR220W CKA2P19454 339 aa17.39■□□□□ 0.37
CCC1YLR220W YUR1P26725 428 aa17.39■□□□□ 0.37
CCC1YLR220W PGM1P33401 570 aaKnown RBP17.39■□□□□ 0.37
CCC1YLR220W MSC6Q08818 692 aaKnown RBP17.39■□□□□ 0.37
CCC1YLR220W ICL2Q12031 575 aa17.39■□□□□ 0.37
CCC1YLR220W SMC6Q12749 1114 aa17.39■□□□□ 0.37
CCC1YLR220W PGK1P00560 416 aaKnown RBP17.38■□□□□ 0.37
CCC1YLR220W SNF7P39929 240 aaKnown RBP17.38■□□□□ 0.37
CCC1YLR220W BRE2P43132 505 aa17.38■□□□□ 0.37
CCC1YLR220W YGL039WP53183 348 aaKnown RBP17.38■□□□□ 0.37
CCC1YLR220W HIS4P00815 799 aaKnown RBP17.37■□□□□ 0.37
CCC1YLR220W RVS167P39743 482 aaKnown RBP17.37■□□□□ 0.37
CCC1YLR220W CBK1P53894 756 aa17.37■□□□□ 0.37
CCC1YLR220W FKS1P38631 1876 aaKnown RBP17.37■□□□□ 0.37
CCC1YLR220W SUV3P32580 737 aa17.36■□□□□ 0.37
CCC1YLR220W YKT6P36015 200 aaKnown RBP17.36■□□□□ 0.37
CCC1YLR220W HMF1P40037 129 aaKnown RBP17.36■□□□□ 0.37
CCC1YLR220W UBA2P52488 636 aa17.36■□□□□ 0.37
CCC1YLR220W TRM11Q12463 433 aa17.36■□□□□ 0.37
CCC1YLR220W GPA1P08539 472 aa17.35■□□□□ 0.37
CCC1YLR220W YEL076C-AP0CX16 216 aa17.35■□□□□ 0.37
CCC1YLR220W YLR464WP0CX17 216 aa17.35■□□□□ 0.37
CCC1YLR220W HIR1P32479 840 aa17.35■□□□□ 0.37
CCC1YLR220W RPN12P32496 274 aa17.35■□□□□ 0.37
CCC1YLR220W TIM23P32897 222 aa17.35■□□□□ 0.37
CCC1YLR220W YEL076CP39971 216 aa17.35■□□□□ 0.37
CCC1YLR220W PSF2P40359 213 aa17.35■□□□□ 0.37
CCC1YLR220W ADY4Q05955 493 aa17.35■□□□□ 0.37
CCC1YLR220W ARL1P38116 183 aaKnown RBP17.34■□□□□ 0.37
CCC1YLR220W VPS53P47061 822 aa17.34■□□□□ 0.37
CCC1YLR220W UBP15P50101 1230 aa17.34■□□□□ 0.37
CCC1YLR220W ISY1P21374 235 aaPredicted RBP17.33■□□□□ 0.36
CCC1YLR220W PRP22P24384 1145 aaKnown RBP17.33■□□□□ 0.36
CCC1YLR220W PET10P36139 283 aa17.33■□□□□ 0.36
CCC1YLR220W TVP38P36164 337 aa17.33■□□□□ 0.36
CCC1YLR220W YER130CP39959 443 aa17.33■□□□□ 0.36
CCC1YLR220W VTC2P43585 828 aa17.33■□□□□ 0.36
CCC1YLR220W PRY3P47033 881 aa17.33■□□□□ 0.36
CCC1YLR220W SCS3P53012 380 aa17.33■□□□□ 0.36
CCC1YLR220W DIP5P53388 608 aa17.33■□□□□ 0.36
CCC1YLR220W CLN3P13365 580 aa17.32■□□□□ 0.36
CCC1YLR220W DID4P36108 232 aa17.32■□□□□ 0.36
CCC1YLR220W NUP82P40368 713 aa17.32■□□□□ 0.36
CCC1YLR220W ZPR1P53303 486 aaKnown RBP17.32■□□□□ 0.36
CCC1YLR220W SUP45P12385 437 aaKnown RBP17.31■□□□□ 0.36
CCC1YLR220W AIM21P40563 679 aa17.31■□□□□ 0.36
CCC1YLR220W HUL5P53119 910 aa17.31■□□□□ 0.36
CCC1YLR220W YLH47Q06493 454 aa17.31■□□□□ 0.36
CCC1YLR220W CRD1Q07560 283 aa17.31■□□□□ 0.36
CCC1YLR220W FIS1P40515 155 aa17.3■□□□□ 0.36
CCC1YLR220W PGA2P53903 129 aa17.3■□□□□ 0.36
CCC1YLR220W POX1P13711 748 aa17.29■□□□□ 0.36
CCC1YLR220W ULP1Q02724 621 aa17.29■□□□□ 0.36
CCC1YLR220W YDR461C-AQ2V2P7 80 aa17.29■□□□□ 0.36
CCC1YLR220W SRD1P09007 221 aa17.28■□□□□ 0.36
CCC1YLR220W MIP1P15801 1254 aa17.28■□□□□ 0.36
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms