RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PWP1	YLR196W	SSB2	P40150	613 aa	Known RBP	5.68	□□□□□ -1.5
PWP1	YLR196W	CAF130	P53280	1122 aa	Predicted RBP	5.68	□□□□□ -1.5
PWP1	YLR196W	RNH70	P53331	553 aa		5.68	□□□□□ -1.5
PWP1	YLR196W	CWC21	Q03375	135 aa	Known RBP	5.68	□□□□□ -1.5
PWP1	YLR196W	YML108W	Q03759	105 aa		5.68	□□□□□ -1.5
PWP1	YLR196W	SWA2	Q06677	668 aa		5.68	□□□□□ -1.5
PWP1	YLR196W	GRC3	Q07845	632 aa		5.68	□□□□□ -1.5
PWP1	YLR196W	CHS5	Q12114	671 aa	Known RBP	5.68	□□□□□ -1.5
PWP1	YLR196W	CDC37	P06101	506 aa	Known RBP	5.68	□□□□□ -1.5
PWP1	YLR196W	KIN1	P13185	1064 aa		5.68	□□□□□ -1.5
PWP1	YLR196W	TRM1	P15565	570 aa	Known RBP	5.68	□□□□□ -1.5
PWP1	YLR196W	TPM1	P17536	199 aa	Known RBP	5.68	□□□□□ -1.5
PWP1	YLR196W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	not detected
PWP1	YLR196W	ECM32	P32644	1121 aa	Known RBP	5.68	□□□□□ -1.5
PWP1	YLR196W	SMY2	P32909	740 aa	Known RBP	5.68	□□□□□ -1.5
PWP1	YLR196W	BMH2	P34730	273 aa	Known RBP	5.68	□□□□□ -1.5
PWP1	YLR196W	MIA40	P36046	403 aa		5.68	□□□□□ -1.5
PWP1	YLR196W	CST6	P40535	587 aa		5.68	□□□□□ -1.5
PWP1	YLR196W	CEG1	Q01159	459 aa	Predicted RBP	5.68	□□□□□ -1.5
PWP1	YLR196W	MTC5	Q03897	1148 aa		5.68	□□□□□ -1.5
PWP1	YLR196W	NKP2	Q06162	153 aa		5.68	□□□□□ -1.5
PWP1	YLR196W	AOS1	Q06624	347 aa		5.68	□□□□□ -1.5
PWP1	YLR196W	BRX1	Q08235	291 aa	Known RBP	5.68	□□□□□ -1.5
PWP1	YLR196W	SFI1	Q12369	946 aa		5.68	□□□□□ -1.5
PWP1	YLR196W	DPH6	Q12429	685 aa		5.68	□□□□□ -1.5
PWP1	YLR196W	RPS3	P05750	240 aa	Known RBP	5.67	□□□□□ -1.5
PWP1	YLR196W	MRM1	P25270	412 aa		5.67	□□□□□ -1.5
PWP1	YLR196W	OCA4	P25366	362 aa		5.67	□□□□□ -1.5
PWP1	YLR196W	KRR1	P25586	316 aa	Predicted RBP	5.67	□□□□□ -1.5
PWP1	YLR196W	ITR1	P30605	584 aa		5.67	□□□□□ -1.5
PWP1	YLR196W	PXA2	P34230	853 aa		5.67	□□□□□ -1.5
PWP1	YLR196W	SLD2	P34252	453 aa		5.67	□□□□□ -1.5
PWP1	YLR196W	MRP8	P35719	219 aa		5.67	□□□□□ -1.5
PWP1	YLR196W	SRL3	P36167	246 aa		5.67	□□□□□ -1.5
PWP1	YLR196W	GRX7	P38068	203 aa		5.67	□□□□□ -1.5
PWP1	YLR196W	PSY4	P38193	441 aa		5.67	□□□□□ -1.5
PWP1	YLR196W	UBP14	P38237	781 aa	Known RBP	5.67	□□□□□ -1.5
PWP1	YLR196W	SAK1	P38990	1142 aa		5.67	□□□□□ -1.5
PWP1	YLR196W	DOT6	P40059	670 aa	Known RBP	5.67	□□□□□ -1.5
PWP1	YLR196W	RIM21	P48565	533 aa		5.67	□□□□□ -1.5
PWP1	YLR196W	LSG1	P53145	640 aa	Known RBP	5.67	□□□□□ -1.5
PWP1	YLR196W	COP1	P53622	1201 aa	Known RBP	5.67	□□□□□ -1.5
PWP1	YLR196W	ARP5	P53946	755 aa		5.67	□□□□□ -1.5
PWP1	YLR196W	RAD33	Q04231	177 aa		5.67	□□□□□ -1.5
PWP1	YLR196W	TAF3	Q12297	353 aa		5.67	□□□□□ -1.5
PWP1	YLR196W	LSO2	Q3E772	92 aa	Known RBP	5.67	□□□□□ -1.5
PWP1	YLR196W	PDR18	P53756	1333 aa		5.67	□□□□□ -1.5
PWP1	YLR196W	RPO41	P13433	1351 aa	Known RBP	5.67	□□□□□ -1.5
PWP1	YLR196W	TRX2	P22803	104 aa	Known RBP	5.66	□□□□□ -1.5
PWP1	YLR196W	AAD3	P25612	363 aa		5.66	□□□□□ -1.5
PWP1	YLR196W	SET3	P36124	751 aa		5.66	□□□□□ -1.5
PWP1	YLR196W	FUI1	P38196	639 aa		5.66	□□□□□ -1.5
PWP1	YLR196W	GDT1	P38301	280 aa	Predicted RBP	5.66	□□□□□ -1.5
PWP1	YLR196W	RFC1	P38630	861 aa	Known RBP	5.66	□□□□□ -1.5
PWP1	YLR196W	ESL1	P40456	1118 aa		5.66	□□□□□ -1.5
PWP1	YLR196W	RSM25	P40496	264 aa		5.66	□□□□□ -1.5
PWP1	YLR196W	PHB1	P40961	287 aa		5.66	□□□□□ -1.5
PWP1	YLR196W	CEP3	P40969	608 aa		5.66	□□□□□ -1.5
PWP1	YLR196W	ASI1	P54074	624 aa		5.66	□□□□□ -1.5
PWP1	YLR196W	ADA2	Q02336	434 aa		5.66	□□□□□ -1.5
PWP1	YLR196W	ULP1	Q02724	621 aa		5.66	□□□□□ -1.5
PWP1	YLR196W	IOC2	Q12072	812 aa		5.66	□□□□□ -1.5
PWP1	YLR196W	MAM3	Q12296	706 aa		5.66	□□□□□ -1.5
PWP1	YLR196W	DIT1	P21623	536 aa		5.65	□□□□□ -1.5
PWP1	YLR196W	CDC60	P26637	1090 aa	Known RBP	5.65	□□□□□ -1.5
PWP1	YLR196W	GRX4	P32642	244 aa		5.65	□□□□□ -1.5
PWP1	YLR196W	SEC66	P33754	206 aa		5.65	□□□□□ -1.5
PWP1	YLR196W	STE13	P33894	931 aa		5.65	□□□□□ -1.5
PWP1	YLR196W	SET1	P38827	1080 aa	Known RBP	5.65	□□□□□ -1.5
PWP1	YLR196W	GTT3	P39996	337 aa		5.65	□□□□□ -1.5
PWP1	YLR196W	YRF1-2	P40105	1681 aa		5.65	□□□□□ -1.5
PWP1	YLR196W	GCD10	P41814	478 aa		5.65	□□□□□ -1.5
PWP1	YLR196W	STU2	P46675	888 aa		5.65	□□□□□ -1.5
PWP1	YLR196W	NPA3	P47122	385 aa		5.65	□□□□□ -1.5
PWP1	YLR196W	ROM2	P51862	1356 aa	Known RBP	5.65	□□□□□ -1.5
PWP1	YLR196W	YGL242C	P53066	181 aa		5.65	□□□□□ -1.5
PWP1	YLR196W	DSD1	P53095	428 aa		5.65	□□□□□ -1.5
PWP1	YLR196W	DIP5	P53388	608 aa		5.65	□□□□□ -1.5
PWP1	YLR196W	ZDS2	P54786	942 aa		5.65	□□□□□ -1.5
PWP1	YLR196W	YMR018W	Q04364	514 aa		5.65	□□□□□ -1.5
PWP1	YLR196W	SPN1	Q06505	410 aa	Predicted RBP	5.65	□□□□□ -1.5
PWP1	YLR196W	RSC3	Q06639	885 aa		5.65	□□□□□ -1.5
PWP1	YLR196W	TSR1	Q07381	788 aa	Known RBP	5.65	□□□□□ -1.5
PWP1	YLR196W	GAS4	Q08271	471 aa		5.65	□□□□□ -1.5
PWP1	YLR196W	NOB1	Q08444	459 aa	Known RBP	5.65	□□□□□ -1.5
PWP1	YLR196W	NOT5	Q12514	560 aa	Predicted RBP	5.65	□□□□□ -1.5
PWP1	YLR196W	FOB1	O13329	566 aa		5.65	□□□□□ -1.51
PWP1	YLR196W	LEU2	P04173	364 aa	Predicted RBP	5.65	□□□□□ -1.51
PWP1	YLR196W	HIS3	P06633	220 aa		5.65	□□□□□ -1.51
PWP1	YLR196W	SSC1	P0CS90	654 aa	Known RBP	5.65	□□□□□ -1.51
PWP1	YLR196W	ADH4	P10127	382 aa		5.65	□□□□□ -1.51
PWP1	YLR196W	MCM2	P29469	868 aa		5.65	□□□□□ -1.51
PWP1	YLR196W	XRS2	P33301	854 aa		5.65	□□□□□ -1.51
PWP1	YLR196W	BUD2	P33314	1104 aa		5.65	□□□□□ -1.51
PWP1	YLR196W	TIF5	P38431	405 aa	Known RBP	5.65	□□□□□ -1.51
PWP1	YLR196W	APE4	P38821	490 aa		5.65	□□□□□ -1.51
PWP1	YLR196W	VID28	P40547	921 aa		5.65	□□□□□ -1.51
PWP1	YLR196W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.65	□□□□□ -1.51	not detected
PWP1	YLR196W	ACF4	P47129	309 aa		5.65	□□□□□ -1.51
PWP1	YLR196W	SPO1	P53541	631 aa		5.65	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 89.3 ms