RNA–Protein interactions for RNA: YLR176C

RFX1, Transcript of Major transcriptional repressor of DNA-damage-regulated genes, yeast

Gene RFX1, Length 2,436 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RFX1	YLR176C	PRO1	P32264	428 aa		2.7	□□□□□ -1.98
RFX1	YLR176C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	2.7	□□□□□ -1.98	not detected
RFX1	YLR176C	YSC84	P32793	468 aa		2.7	□□□□□ -1.98
RFX1	YLR176C	YGR053C	P53234	283 aa		2.7	□□□□□ -1.98
RFX1	YLR176C	SSY1	Q03770	852 aa		2.7	□□□□□ -1.98
RFX1	YLR176C	BRE4	Q07660	1125 aa		2.7	□□□□□ -1.98
RFX1	YLR176C	YPL260W	Q08977	551 aa		2.7	□□□□□ -1.98
RFX1	YLR176C	YER152C	P10356	443 aa		2.7	□□□□□ -1.98
RFX1	YLR176C	SAM35	P14693	329 aa		2.7	□□□□□ -1.98
RFX1	YLR176C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	2.7	□□□□□ -1.98	not detected
RFX1	YLR176C	PTC7	P38797	343 aa		2.7	□□□□□ -1.98
RFX1	YLR176C	MPH1	P40562	993 aa		2.7	□□□□□ -1.98
RFX1	YLR176C	GTS1	P40956	396 aa		2.7	□□□□□ -1.98
RFX1	YLR176C	YLR225C	Q05948	407 aa	Known RBP	2.7	□□□□□ -1.98
RFX1	YLR176C	ESC2	Q06340	456 aa		2.7	□□□□□ -1.98
RFX1	YLR176C	FAL1	Q12099	399 aa	Known RBP	2.7	□□□□□ -1.98
RFX1	YLR176C	INO1	P11986	533 aa		2.69	□□□□□ -1.98
RFX1	YLR176C	PRI2	P20457	528 aa		2.69	□□□□□ -1.98
RFX1	YLR176C	BAS1	P22035	811 aa		2.69	□□□□□ -1.98
RFX1	YLR176C	ADP1	P25371	1049 aa		2.69	□□□□□ -1.98
RFX1	YLR176C	HNT2	P49775	206 aa		2.69	□□□□□ -1.98
RFX1	YLR176C	HOS3	Q02959	697 aa	Known RBP	2.69	□□□□□ -1.98
RFX1	YLR176C	COQ4	O13525	335 aa		2.69	□□□□□ -1.98
RFX1	YLR176C	TNA1	P53322	534 aa		2.69	□□□□□ -1.98
RFX1	YLR176C	SPO20	Q04359	397 aa		2.69	□□□□□ -1.98
RFX1	YLR176C	RCL1	Q08096	367 aa	Predicted RBP	2.69	□□□□□ -1.98
RFX1	YLR176C	ABD1	P32783	436 aa	Predicted RBP	2.68	□□□□□ -1.98
RFX1	YLR176C	MDL2	P33311	773 aa		2.68	□□□□□ -1.98
RFX1	YLR176C	YFL054C	P43549	646 aa		2.68	□□□□□ -1.98
RFX1	YLR176C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	2.68	□□□□□ -1.98	not detected
RFX1	YLR176C	GNT1	Q12096	491 aa		2.68	□□□□□ -1.98
RFX1	YLR176C	YPL066W	Q12194	479 aa		2.68	□□□□□ -1.98
RFX1	YLR176C	SRO9	P25567	434 aa	Known RBP	2.68	□□□□□ -1.98
RFX1	YLR176C	AIM26	P32858	118 aa		2.68	□□□□□ -1.98
RFX1	YLR176C	RPN3	P40016	523 aa	Known RBP	2.68	□□□□□ -1.98
RFX1	YLR176C	RKM4	Q12504	494 aa		2.68	□□□□□ -1.98
RFX1	YLR176C	SNF5	P18480	905 aa		2.67	□□□□□ -1.98
RFX1	YLR176C	HSP78	P33416	811 aa		2.67	□□□□□ -1.98
RFX1	YLR176C	YKL107W	P34251	309 aa		2.67	□□□□□ -1.98
RFX1	YLR176C	YKL069W	P36088	180 aa		2.67	□□□□□ -1.98
RFX1	YLR176C	CCZ1	P38273	704 aa		2.67	□□□□□ -1.98
RFX1	YLR176C	YGL176C	P46945	554 aa		2.67	□□□□□ -1.98
RFX1	YLR176C	SPP382	Q06411	708 aa	Predicted RBP	2.67	□□□□□ -1.98
RFX1	YLR176C	RSC58	Q07979	502 aa		2.67	□□□□□ -1.98
RFX1	YLR176C	OPI10	Q08202	246 aa		2.67	□□□□□ -1.98
RFX1	YLR176C	MXR1	P40029	184 aa		2.67	□□□□□ -1.98
RFX1	YLR176C	NBA1	Q08229	501 aa	Known RBP	2.67	□□□□□ -1.98
RFX1	YLR176C	LPX1	Q12405	387 aa	Known RBP	2.67	□□□□□ -1.98
RFX1	YLR176C	BAP2	P38084	609 aa		2.66	□□□□□ -1.98
RFX1	YLR176C	POL12	P38121	705 aa	Predicted RBP	2.66	□□□□□ -1.98
RFX1	YLR176C	RSB1	Q08417	382 aa		2.66	□□□□□ -1.98
RFX1	YLR176C	SPS1	P08458	490 aa		2.66	□□□□□ -1.98
RFX1	YLR176C	RPL11A	P0C0W9	174 aa	Known RBP	2.66	□□□□□ -1.98
RFX1	YLR176C	DBP2	P24783	546 aa	Known RBP	2.66	□□□□□ -1.98
RFX1	YLR176C	LRG1	P35688	1017 aa		2.66	□□□□□ -1.98
RFX1	YLR176C	PIK1	P39104	1066 aa		2.66	□□□□□ -1.98
RFX1	YLR176C	WRS1	Q12109	432 aa	Known RBP	2.66	□□□□□ -1.98
RFX1	YLR176C	RPL11B	Q3E757	174 aa	Predicted RBP	2.66	□□□□□ -1.98
RFX1	YLR176C	AGP1	P25376	633 aa		2.65	□□□□□ -1.99
RFX1	YLR176C	SBA1	P28707	216 aa	Known RBP	2.65	□□□□□ -1.99
RFX1	YLR176C	VBA5	P36172	582 aa		2.65	□□□□□ -1.99
RFX1	YLR176C	PNT1	P38969	423 aa		2.65	□□□□□ -1.99
RFX1	YLR176C	MBP1	P39678	833 aa		2.65	□□□□□ -1.99
RFX1	YLR176C	SIP5	P40210	489 aa	Known RBP	2.65	□□□□□ -1.99
RFX1	YLR176C	KRI1	P42846	591 aa	Known RBP	2.65	□□□□□ -1.99
RFX1	YLR176C	TDA5	Q06417	326 aa	Known RBP	2.65	□□□□□ -1.99
RFX1	YLR176C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	2.64	□□□□□ -1.99	not detected
RFX1	YLR176C	UGA2	P38067	497 aa		2.64	□□□□□ -1.99
RFX1	YLR176C	FOL2	P51601	243 aa	Known RBP	2.64	□□□□□ -1.99
RFX1	YLR176C	ORC3	P54790	616 aa		2.64	□□□□□ -1.99
RFX1	YLR176C	SSF2	Q12153	453 aa	Predicted RBP	2.64	□□□□□ -1.99
RFX1	YLR176C	DFG16	Q99234	619 aa		2.64	□□□□□ -1.99
RFX1	YLR176C	ETP1	P38748	585 aa	Known RBP	2.64	□□□□□ -1.99
RFX1	YLR176C	SPF1	P39986	1215 aa	Known RBP	2.64	□□□□□ -1.99
RFX1	YLR176C	ACM1	Q08981	209 aa		2.64	□□□□□ -1.99
RFX1	YLR176C	SLA2	P33338	968 aa		2.63	□□□□□ -1.99
RFX1	YLR176C	SNF7	P39929	240 aa	Known RBP	2.63	□□□□□ -1.99
RFX1	YLR176C	GEM1	P39722	662 aa		2.63	□□□□□ -1.99
RFX1	YLR176C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	2.63	□□□□□ -1.99	not detected
RFX1	YLR176C	SHE9	Q04172	456 aa		2.63	□□□□□ -1.99
RFX1	YLR176C	YDL177C	Q12257	170 aa		2.63	□□□□□ -1.99
RFX1	YLR176C	BI4	P03879	638 aa		2.62	□□□□□ -1.99
RFX1	YLR176C	GRX1	P25373	110 aa	Known RBP	2.62	□□□□□ -1.99
RFX1	YLR176C	STE5	P32917	917 aa		2.62	□□□□□ -1.99
RFX1	YLR176C	SEG2	P34250	1132 aa		2.62	□□□□□ -1.99
RFX1	YLR176C	MRP8	P35719	219 aa		2.62	□□□□□ -1.99
RFX1	YLR176C	ABZ1	P37254	787 aa	Predicted RBP	2.62	□□□□□ -1.99
RFX1	YLR176C	SEC26	P41810	973 aa	Known RBP	2.62	□□□□□ -1.99
RFX1	YLR176C	AVT1	P47082	602 aa		2.62	□□□□□ -1.99
RFX1	YLR176C	ECL1	P48235	211 aa		2.62	□□□□□ -1.99
RFX1	YLR176C	SVS1	Q12254	260 aa		2.62	□□□□□ -1.99
RFX1	YLR176C	YBR184W	P38299	523 aa		2.62	□□□□□ -1.99
RFX1	YLR176C	TSA1	P34760	196 aa	Known RBP	2.61	□□□□□ -1.99
RFX1	YLR176C	RFC5	P38251	354 aa		2.61	□□□□□ -1.99
RFX1	YLR176C	NAN1	Q02931	896 aa	Known RBP	2.61	□□□□□ -1.99
RFX1	YLR176C	HRQ1	Q05549	1077 aa		2.61	□□□□□ -1.99
RFX1	YLR176C	THS1	P04801	734 aa	Known RBP	2.61	□□□□□ -1.99
RFX1	YLR176C	ACE2	P21192	770 aa		2.61	□□□□□ -1.99
RFX1	YLR176C	GAS1	P22146	559 aa	Known RBP	2.61	□□□□□ -1.99
RFX1	YLR176C	APL1	P27351	700 aa		2.61	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms