RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W PIN4P34217 668 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
SOF1YLL011W YBR284WP38150 797 aa5.26□□□□□ -1.57
SOF1YLL011W RIM11P38615 370 aa5.26□□□□□ -1.57
SOF1YLL011W XDJ1P39102 459 aa5.26□□□□□ -1.57
SOF1YLL011W YIL165CP40446 119 aa5.26□□□□□ -1.57
SOF1YLL011W PIP2P52960 996 aa5.26□□□□□ -1.57
SOF1YLL011W TIF35Q04067 274 aaKnown RBP5.26□□□□□ -1.57
SOF1YLL011W HFD1Q04458 532 aa5.26□□□□□ -1.57
SOF1YLL011W YPL066WQ12194 479 aa5.26□□□□□ -1.57
SOF1YLL011W GSY1P23337 708 aa5.26□□□□□ -1.57
SOF1YLL011W MRS6P32864 603 aaKnown RBP5.26□□□□□ -1.57
SOF1YLL011W RPT2P40327 437 aaKnown RBP5.26□□□□□ -1.57
SOF1YLL011W ESF2P53743 316 aaKnown RBP5.26□□□□□ -1.57
SOF1YLL011W MET14Q02196 202 aa5.26□□□□□ -1.57
SOF1YLL011W CUS1Q02554 436 aaPredicted RBP5.26□□□□□ -1.57
SOF1YLL011W SAS4Q04003 481 aa5.26□□□□□ -1.57
SOF1YLL011W RKM4Q12504 494 aa5.26□□□□□ -1.57
SOF1YLL011W RDH54P38086 958 aa5.25□□□□□ -1.57
SOF1YLL011W MGS1P40151 587 aa5.25□□□□□ -1.57
SOF1YLL011W ENT3P47160 408 aa5.25□□□□□ -1.57
SOF1YLL011W MTQ2Q03920 221 aaPredicted RBP5.25□□□□□ -1.57
SOF1YLL011W GAL1P04385 528 aa5.24□□□□□ -1.57
SOF1YLL011W MPH2P0CD99 609 aa5.24□□□□□ -1.57
SOF1YLL011W RAD53P22216 821 aa5.24□□□□□ -1.57
SOF1YLL011W TRZ1P36159 838 aaPredicted RBP5.24□□□□□ -1.57
SOF1YLL011W IES1P43579 692 aa5.24□□□□□ -1.57
SOF1YLL011W UBP6P43593 499 aaKnown RBP5.24□□□□□ -1.57
SOF1YLL011W AOS1Q06624 347 aa5.24□□□□□ -1.57
SOF1YLL011W SSN2P38931 1420 aa5.24□□□□□ -1.57
SOF1YLL011W SYP1P25623 870 aaKnown RBP5.23□□□□□ -1.57
SOF1YLL011W IRE1P32361 1115 aa5.23□□□□□ -1.57
SOF1YLL011W MCM7P38132 845 aa5.23□□□□□ -1.57
SOF1YLL011W SHU2P38957 223 aa5.23□□□□□ -1.57
SOF1YLL011W RAT1Q02792 1006 aaKnown RBP5.23□□□□□ -1.57
SOF1YLL011W UFD4P33202 1483 aa5.22□□□□□ -1.57
SOF1YLL011W RAD18P10862 487 aa5.22□□□□□ -1.57
SOF1YLL011W MSD1P15179 658 aaKnown RBP5.22□□□□□ -1.57
SOF1YLL011W DOM34P33309 386 aa5.22□□□□□ -1.57
SOF1YLL011W HSP78P33416 811 aa5.22□□□□□ -1.57
SOF1YLL011W AHP1P38013 176 aaKnown RBP5.22□□□□□ -1.57
SOF1YLL011W EXO84P38261 753 aa5.22□□□□□ -1.57
SOF1YLL011W YAP1801P38856 637 aa5.22□□□□□ -1.57
SOF1YLL011W SAH1P39954 449 aaKnown RBP5.22□□□□□ -1.57
SOF1YLL011W MSN5P52918 1224 aa5.22□□□□□ -1.57
SOF1YLL011W MET13P53128 600 aa5.22□□□□□ -1.57
SOF1YLL011W ERP4Q12450 207 aa5.22□□□□□ -1.57
SOF1YLL011W CDC9P04819 755 aa5.21□□□□□ -1.58
SOF1YLL011W PHR1P05066 565 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58not detected
SOF1YLL011W SRD1P09007 221 aa5.21□□□□□ -1.58
SOF1YLL011W HVG1P0CE11 249 aa5.21□□□□□ -1.58
SOF1YLL011W PDC6P26263 563 aaKnown RBP5.21□□□□□ -1.58
SOF1YLL011W MRF1P30775 413 aaPredicted RBP5.21□□□□□ -1.58
SOF1YLL011W SSH4P32343 579 aa5.21□□□□□ -1.58
SOF1YLL011W BCK2P33306 851 aa5.21□□□□□ -1.58
SOF1YLL011W NIC96P34077 839 aa5.21□□□□□ -1.58
SOF1YLL011W EXO5P38289 585 aa5.21□□□□□ -1.58
SOF1YLL011W MDM1Q01846 1127 aa5.21□□□□□ -1.58
SOF1YLL011W EST2Q06163 884 aa5.21□□□□□ -1.58
SOF1YLL011W YDR306CQ06640 478 aa5.21□□□□□ -1.58
SOF1YLL011W PSH1Q12161 406 aa5.21□□□□□ -1.58
SOF1YLL011W YPR071WQ12346 211 aa5.21□□□□□ -1.58
SOF1YLL011W TY1A-DR3Q12441 440 aa5.21□□□□□ -1.58
SOF1YLL011W APA1P16550 321 aaKnown RBP5.2□□□□□ -1.58
SOF1YLL011W DBP5P20449 482 aaKnown RBP5.2□□□□□ -1.58
SOF1YLL011W PTP2P29461 750 aa5.2□□□□□ -1.58
SOF1YLL011W PRP19P32523 503 aaKnown RBP5.2□□□□□ -1.58
SOF1YLL011W CNN1P43618 361 aa5.2□□□□□ -1.58
SOF1YLL011W YNR040WP53736 256 aa5.2□□□□□ -1.58
SOF1YLL011W LCB5Q06147 687 aaKnown RBP5.2□□□□□ -1.58
SOF1YLL011W MET5P47169 1442 aa5.2□□□□□ -1.58
SOF1YLL011W LEU1P07264 779 aaKnown RBP5.2□□□□□ -1.58
SOF1YLL011W AAR2P32357 355 aaPredicted RBP5.2□□□□□ -1.58
SOF1YLL011W NFU1P32860 256 aa5.2□□□□□ -1.58
SOF1YLL011W PTH2P34222 208 aa5.2□□□□□ -1.58
SOF1YLL011W PET10P36139 283 aa5.2□□□□□ -1.58
SOF1YLL011W RIM4P38741 713 aa5.2□□□□□ -1.58
SOF1YLL011W HOS4P40480 1083 aa5.2□□□□□ -1.58
SOF1YLL011W ALG2P43636 503 aa5.2□□□□□ -1.58
SOF1YLL011W YJR096WP47137 282 aa5.2□□□□□ -1.58
SOF1YLL011W SKP1P52286 194 aa5.2□□□□□ -1.58
SOF1YLL011W PPT1P53043 513 aa5.2□□□□□ -1.58
SOF1YLL011W RRP6Q12149 733 aaKnown RBP5.2□□□□□ -1.58
SOF1YLL011W RRI2Q12348 645 aa5.2□□□□□ -1.58
SOF1YLL011W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58 RIP-Chip
SOF1YLL011W SFL1P20134 766 aa5.19□□□□□ -1.58
SOF1YLL011W SDH2P21801 266 aa5.19□□□□□ -1.58
SOF1YLL011W PCL2P25693 308 aa5.19□□□□□ -1.58
SOF1YLL011W MNN4P36044 1178 aa5.19□□□□□ -1.58
SOF1YLL011W YKL077WP36081 392 aa5.19□□□□□ -1.58
SOF1YLL011W SIP5P40210 489 aaKnown RBP5.19□□□□□ -1.58
SOF1YLL011W GLO4Q12320 285 aa5.19□□□□□ -1.58
SOF1YLL011W LTE1P07866 1435 aa5.18□□□□□ -1.58
SOF1YLL011W INH1P01097 85 aa5.18□□□□□ -1.58
SOF1YLL011W TY1A-LR4P0C2I8 440 aaKnown RBP5.18□□□□□ -1.58
SOF1YLL011W TY1A-DR6P0CX70 440 aa5.18□□□□□ -1.58
SOF1YLL011W TY1A-ER1P0CX71 440 aa5.18□□□□□ -1.58
SOF1YLL011W TY1A-LR2P0CX72 440 aa5.18□□□□□ -1.58
SOF1YLL011W TY1A-PLP0CX73 440 aa5.18□□□□□ -1.58
SOF1YLL011W TY1A-JR1P0CX74 440 aa5.18□□□□□ -1.58
SOF1YLL011W TY1A-LR3P0CX75 440 aa5.18□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms