RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W YNR063WP53749 607 aa7.13□□□□□ -1.27
SPC42YKL042W CAN1P04817 590 aa7.12□□□□□ -1.27
SPC42YKL042W ERR1P0CX10 437 aa7.12□□□□□ -1.27
SPC42YKL042W ERR2P0CX11 437 aa7.12□□□□□ -1.27
SPC42YKL042W PRP9P19736 530 aaKnown RBP7.12□□□□□ -1.27
SPC42YKL042W PUF4P25339 888 aaKnown RBP RIP-Chip data7.12□□□□□ -1.27not detected
SPC42YKL042W THI4P32318 326 aa7.12□□□□□ -1.27
SPC42YKL042W TED1P40533 473 aa7.12□□□□□ -1.27
SPC42YKL042W SPO74P45819 413 aa7.12□□□□□ -1.27
SPC42YKL042W GIS4Q04233 774 aa7.12□□□□□ -1.27
SPC42YKL042W AFG2P32794 780 aa7.11□□□□□ -1.27
SPC42YKL042W ALG3P38179 458 aa7.11□□□□□ -1.27
SPC42YKL042W POL5P39985 1022 aaKnown RBP7.11□□□□□ -1.27
SPC42YKL042W HUL4P40985 892 aa7.11□□□□□ -1.27
SPC42YKL042W HNT2P49775 206 aa7.11□□□□□ -1.27
SPC42YKL042W UTP8P53276 713 aaKnown RBP7.11□□□□□ -1.27
SPC42YKL042W YMR074CQ04773 145 aa7.11□□□□□ -1.27
SPC42YKL042W YPL066WQ12194 479 aa7.11□□□□□ -1.27
SPC42YKL042W YLL054CQ12244 843 aa7.11□□□□□ -1.27
SPC42YKL042W YGR161W-CQ3E744 92 aa7.11□□□□□ -1.27
SPC42YKL042W SAC7P17121 654 aa7.1□□□□□ -1.27
SPC42YKL042W MPH1P40562 993 aa7.1□□□□□ -1.27
SPC42YKL042W ALR2P43553 858 aa7.1□□□□□ -1.27
SPC42YKL042W UTP14Q04500 899 aaKnown RBP7.1□□□□□ -1.27
SPC42YKL042W UBX5Q06682 500 aa7.1□□□□□ -1.27
SPC42YKL042W LAP2Q10740 671 aa7.1□□□□□ -1.27
SPC42YKL042W RGD1P38339 666 aa7.09□□□□□ -1.27
SPC42YKL042W YAR028WP39548 234 aa7.09□□□□□ -1.27
SPC42YKL042W MBP1P39678 833 aa7.09□□□□□ -1.27
SPC42YKL042W GAS5Q08193 484 aa7.09□□□□□ -1.27
SPC42YKL042W AVO1Q08236 1176 aa7.09□□□□□ -1.27
SPC42YKL042W ELG1Q12050 791 aa7.09□□□□□ -1.27
SPC42YKL042W PTC5Q12511 572 aa7.09□□□□□ -1.27
SPC42YKL042W AI3P03877 415 aa7.08□□□□□ -1.28
SPC42YKL042W MLS1P30952 554 aa7.08□□□□□ -1.28
SPC42YKL042W TAF8Q03750 510 aa7.08□□□□□ -1.28
SPC42YKL042W ALG6Q12001 544 aaKnown RBP7.08□□□□□ -1.28
SPC42YKL042W TSR4P25040 408 aa7.07□□□□□ -1.28
SPC42YKL042W OMA1P36163 345 aa7.07□□□□□ -1.28
SPC42YKL042W HSE1P38753 452 aa7.07□□□□□ -1.28
SPC42YKL042W YJR142WP47173 342 aa7.07□□□□□ -1.28
SPC42YKL042W INP52P50942 1183 aa7.07□□□□□ -1.28
SPC42YKL042W YDL124WQ07551 312 aaKnown RBP7.07□□□□□ -1.28
SPC42YKL042W GNT1Q12096 491 aa7.07□□□□□ -1.28
SPC42YKL042W ERS1P17261 260 aa7.06□□□□□ -1.28
SPC42YKL042W MAE1P36013 669 aaKnown RBP7.06□□□□□ -1.28
SPC42YKL042W RRM3P38766 723 aa7.06□□□□□ -1.28
SPC42YKL042W MSH4P40965 878 aaPredicted RBP7.06□□□□□ -1.28
SPC42YKL042W VPS53P47061 822 aa7.06□□□□□ -1.28
SPC42YKL042W TY4B-PA0A0B7P3V8 1104 aa7.05□□□□□ -1.28
SPC42YKL042W RTA1P53047 317 aa7.05□□□□□ -1.28
SPC42YKL042W TY4A-HQ6Q5P6 413 aa7.05□□□□□ -1.28
SPC42YKL042W NFS1P25374 497 aa7.04□□□□□ -1.28
SPC42YKL042W CCC2P38995 1004 aa7.04□□□□□ -1.28
SPC42YKL042W YGR045CP53229 120 aa7.04□□□□□ -1.28
SPC42YKL042W SPP382Q06411 708 aaPredicted RBP7.04□□□□□ -1.28
SPC42YKL042W PGM1P33401 570 aaKnown RBP7.03□□□□□ -1.28
SPC42YKL042W SIP5P40210 489 aaKnown RBP7.03□□□□□ -1.28
SPC42YKL042W YGL081WP53156 320 aa7.03□□□□□ -1.28
SPC42YKL042W TPO2P53283 614 aa7.03□□□□□ -1.28
SPC42YKL042W DSE4P53753 1117 aa7.03□□□□□ -1.28
SPC42YKL042W ELA1P53861 379 aaPredicted RBP7.03□□□□□ -1.28
SPC42YKL042W CDC11P32458 415 aa7.02□□□□□ -1.29
SPC42YKL042W BET3P36149 193 aa7.02□□□□□ -1.29
SPC42YKL042W QNS1P38795 714 aaKnown RBP7.02□□□□□ -1.29
SPC42YKL042W ARI1P53111 347 aaKnown RBP7.02□□□□□ -1.29
SPC42YKL042W RSA3Q05942 220 aaKnown RBP7.02□□□□□ -1.29
SPC42YKL042W YPL260WQ08977 551 aa7.02□□□□□ -1.29
SPC42YKL042W YOR223WQ12015 292 aa7.02□□□□□ -1.29
SPC42YKL042W NOP14Q99207 810 aaKnown RBP7.02□□□□□ -1.29
SPC42YKL042W MSH2P25847 964 aa7.01□□□□□ -1.29
SPC42YKL042W HBS1P32769 611 aaKnown RBP7.01□□□□□ -1.29
SPC42YKL042W SCT1P32784 759 aa7.01□□□□□ -1.29
SPC42YKL042W KIP3P53086 805 aaKnown RBP7.01□□□□□ -1.29
SPC42YKL042W NPL3Q01560 414 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29not detected
SPC42YKL042W DOT1Q04089 582 aaKnown RBP7.01□□□□□ -1.29
SPC42YKL042W YDR306CQ06640 478 aa7.01□□□□□ -1.29
SPC42YKL042W SRM1P21827 482 aa7□□□□□ -1.29
SPC42YKL042W SFA1P32771 386 aa7□□□□□ -1.29
SPC42YKL042W HSV2P50079 448 aaPredicted RBP7□□□□□ -1.29
SPC42YKL042W NTG2Q08214 380 aa7□□□□□ -1.29
SPC42YKL042W HBN1Q96VH4 193 aa7□□□□□ -1.29
SPC42YKL042W RET1P22276 1149 aaKnown RBP6.99□□□□□ -1.29
SPC42YKL042W AAR2P32357 355 aaPredicted RBP6.99□□□□□ -1.29
SPC42YKL042W GUS1P46655 708 aaKnown RBP RIP-Chip data6.99□□□□□ -1.29not detected
SPC42YKL042W SPO21Q12411 609 aa6.99□□□□□ -1.29
SPC42YKL042W TOM70P07213 617 aaKnown RBP6.98□□□□□ -1.29
SPC42YKL042W YER152CP10356 443 aa6.98□□□□□ -1.29
SPC42YKL042W KIP1P28742 1111 aa6.98□□□□□ -1.29
SPC42YKL042W GRX4P32642 244 aa6.98□□□□□ -1.29
SPC42YKL042W NNK1P36003 928 aa6.98□□□□□ -1.29
SPC42YKL042W DNM1P54861 757 aa6.98□□□□□ -1.29
SPC42YKL042W YLR257WQ06146 321 aaKnown RBP6.98□□□□□ -1.29
SPC42YKL042W SSB1P11484 613 aaKnown RBP6.97□□□□□ -1.29
SPC42YKL042W PPH3P32345 308 aa6.97□□□□□ -1.29
SPC42YKL042W YBR284WP38150 797 aa6.97□□□□□ -1.29
SPC42YKL042W CRP1P38845 465 aaKnown RBP6.97□□□□□ -1.29
SPC42YKL042W PNT1P38969 423 aa6.97□□□□□ -1.29
SPC42YKL042W SSB2P40150 613 aaKnown RBP6.97□□□□□ -1.29
SPC42YKL042W UGO1Q03327 502 aa6.97□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 58.4 ms