RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W SPT20P50875 604 aa4.4□□□□□ -1.71
HIT1YJR055W RSB1Q08417 382 aa4.4□□□□□ -1.71
HIT1YJR055W RPN3P40016 523 aaKnown RBP4.39□□□□□ -1.71
HIT1YJR055W ROD1Q02805 837 aa4.39□□□□□ -1.71
HIT1YJR055W YPL260WQ08977 551 aa4.39□□□□□ -1.71
HIT1YJR055W TAT2P38967 592 aa4.38□□□□□ -1.71
HIT1YJR055W RAT1Q02792 1006 aaKnown RBP4.38□□□□□ -1.71
HIT1YJR055W PLB2Q03674 706 aa4.38□□□□□ -1.71
HIT1YJR055W ROT1Q03691 256 aa4.38□□□□□ -1.71
HIT1YJR055W DUS4Q06063 367 aa4.38□□□□□ -1.71
HIT1YJR055W PRE9P23638 258 aaKnown RBP4.37□□□□□ -1.71
HIT1YJR055W SEC20P28791 383 aa4.37□□□□□ -1.71
HIT1YJR055W IPL1P38991 367 aa4.37□□□□□ -1.71
HIT1YJR055W MPT5P39016 859 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
HIT1YJR055W YFL054CP43549 646 aa4.37□□□□□ -1.71
HIT1YJR055W YGR122WP53272 402 aa4.37□□□□□ -1.71
HIT1YJR055W MCD1Q12158 566 aa4.37□□□□□ -1.71
HIT1YJR055W PUF4P25339 888 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
HIT1YJR055W MKK2P32491 506 aa4.36□□□□□ -1.71
HIT1YJR055W MRPS18P42847 217 aa4.36□□□□□ -1.71
HIT1YJR055W SIW14P53965 281 aa4.36□□□□□ -1.71
HIT1YJR055W TUB2P02557 457 aaKnown RBP4.35□□□□□ -1.71
HIT1YJR055W GAL10P04397 699 aa4.35□□□□□ -1.71
HIT1YJR055W SRM1P21827 482 aa4.35□□□□□ -1.71
HIT1YJR055W DOM34P33309 386 aa4.35□□□□□ -1.71
HIT1YJR055W HXT13P39924 564 aa4.35□□□□□ -1.71
HIT1YJR055W HXT17P53631 564 aa4.35□□□□□ -1.71
HIT1YJR055W HXT15P54854 567 aa4.35□□□□□ -1.71
HIT1YJR055W RSM24Q03976 319 aa4.35□□□□□ -1.71
HIT1YJR055W RAD2P07276 1031 aa4.34□□□□□ -1.71
HIT1YJR055W CMP2P14747 604 aa4.34□□□□□ -1.71
HIT1YJR055W SEC8P32855 1065 aa4.34□□□□□ -1.71
HIT1YJR055W RFC5P38251 354 aa4.34□□□□□ -1.71
HIT1YJR055W ENT3P47160 408 aa4.34□□□□□ -1.71
HIT1YJR055W GNP1P48813 663 aa4.34□□□□□ -1.71
HIT1YJR055W RIB2Q12362 591 aaKnown RBP4.34□□□□□ -1.71
HIT1YJR055W YER152CP10356 443 aa4.33□□□□□ -1.72
HIT1YJR055W CDC20P26309 610 aa4.33□□□□□ -1.72
HIT1YJR055W RGD1P38339 666 aa4.33□□□□□ -1.72
HIT1YJR055W SEN54Q02825 467 aaPredicted RBP4.33□□□□□ -1.72
HIT1YJR055W CYC8P14922 966 aa4.32□□□□□ -1.72
HIT1YJR055W SYP1P25623 870 aaKnown RBP4.32□□□□□ -1.72
HIT1YJR055W MLS1P30952 554 aa4.32□□□□□ -1.72
HIT1YJR055W RPS26AP39938 119 aaKnown RBP4.32□□□□□ -1.72
HIT1YJR055W RPS26BP39939 119 aaKnown RBP4.32□□□□□ -1.72
HIT1YJR055W SVS1Q12254 260 aa4.32□□□□□ -1.72
HIT1YJR055W CDC6P09119 513 aa4.31□□□□□ -1.72
HIT1YJR055W CNN1P43618 361 aa4.31□□□□□ -1.72
HIT1YJR055W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
HIT1YJR055W GIS1Q03833 894 aa4.31□□□□□ -1.72
HIT1YJR055W MRL1Q06815 381 aa4.31□□□□□ -1.72
HIT1YJR055W RXT3Q07458 294 aa4.31□□□□□ -1.72
HIT1YJR055W ACK1Q07622 623 aaPredicted RBP4.31□□□□□ -1.72
HIT1YJR055W GPB1Q08886 897 aa4.31□□□□□ -1.72
HIT1YJR055W PNS1Q12412 539 aa4.31□□□□□ -1.72
HIT1YJR055W GCR1P07261 785 aa4.3□□□□□ -1.72
HIT1YJR055W KIN2P13186 1147 aaKnown RBP4.3□□□□□ -1.72
HIT1YJR055W DBP5P20449 482 aaKnown RBP4.3□□□□□ -1.72
HIT1YJR055W TRM2P33753 639 aa4.3□□□□□ -1.72
HIT1YJR055W LST4P34239 828 aa4.3□□□□□ -1.72
HIT1YJR055W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
HIT1YJR055W APL1P27351 700 aa4.29□□□□□ -1.72
HIT1YJR055W MCM2P29469 868 aa4.29□□□□□ -1.72
HIT1YJR055W MPH1P40562 993 aa4.29□□□□□ -1.72
HIT1YJR055W PBP1P53297 722 aaKnown RBP4.29□□□□□ -1.72
HIT1YJR055W SIZ1Q04195 904 aa4.29□□□□□ -1.72
HIT1YJR055W TMA10Q06177 86 aa4.29□□□□□ -1.72
HIT1YJR055W ATG13Q06628 738 aa4.29□□□□□ -1.72
HIT1YJR055W PUS9Q12069 462 aa4.29□□□□□ -1.72
HIT1YJR055W STE11P23561 717 aa4.28□□□□□ -1.72
HIT1YJR055W HCM1P25364 564 aa4.28□□□□□ -1.72
HIT1YJR055W MNN10P50108 393 aaKnown RBP4.28□□□□□ -1.72
HIT1YJR055W MCM6P53091 1017 aaKnown RBP4.28□□□□□ -1.72
HIT1YJR055W VPS62P53285 467 aa4.28□□□□□ -1.72
HIT1YJR055W BAS1P22035 811 aa4.27□□□□□ -1.73
HIT1YJR055W GTF1P53260 183 aaPredicted RBP4.27□□□□□ -1.73
HIT1YJR055W EMC1P25574 760 aa4.26□□□□□ -1.73
HIT1YJR055W RER2P35196 286 aa4.26□□□□□ -1.73
HIT1YJR055W MXR1P40029 184 aa4.26□□□□□ -1.73
HIT1YJR055W MSE1P48525 536 aa4.26□□□□□ -1.73
HIT1YJR055W SLI1P53304 468 aa4.26□□□□□ -1.73
HIT1YJR055W MSC2Q03455 724 aa4.26□□□□□ -1.73
HIT1YJR055W YAP6Q03935 383 aa4.26□□□□□ -1.73
HIT1YJR055W SPR28Q04921 423 aa4.26□□□□□ -1.73
HIT1YJR055W YLR224WQ05947 369 aa4.26□□□□□ -1.73
HIT1YJR055W NTO1Q12311 748 aa4.26□□□□□ -1.73
HIT1YJR055W TAD3Q9URQ3 322 aa4.26□□□□□ -1.73
HIT1YJR055W ATE1P16639 503 aa4.25□□□□□ -1.73
HIT1YJR055W ACE2P21192 770 aa4.25□□□□□ -1.73
HIT1YJR055W SLD2P34252 453 aa4.25□□□□□ -1.73
HIT1YJR055W UGA2P38067 497 aa4.25□□□□□ -1.73
HIT1YJR055W MGE1P38523 228 aa4.25□□□□□ -1.73
HIT1YJR055W POL32P47110 350 aa4.25□□□□□ -1.73
HIT1YJR055W GCV2P49095 1034 aa4.25□□□□□ -1.73
HIT1YJR055W SUN4P53616 420 aa4.25□□□□□ -1.73
HIT1YJR055W TIF35Q04067 274 aaKnown RBP4.25□□□□□ -1.73
HIT1YJR055W HMI1Q12039 706 aa4.25□□□□□ -1.73
HIT1YJR055W RPL11AP0C0W9 174 aaKnown RBP4.24□□□□□ -1.73
HIT1YJR055W FYV10P40492 516 aa4.24□□□□□ -1.73
HIT1YJR055W YJR107WP47145 328 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 60.8 ms