RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C GAS5Q08193 484 aa2.99□□□□□ -1.93
VPS35YJL154C RNH70P53331 553 aa2.99□□□□□ -1.93
VPS35YJL154C YMR187CQ03236 431 aa2.99□□□□□ -1.93
VPS35YJL154C ESC2Q06340 456 aa2.99□□□□□ -1.93
VPS35YJL154C GIC2Q06648 383 aa2.99□□□□□ -1.93
VPS35YJL154C GNT1Q12096 491 aa2.99□□□□□ -1.93
VPS35YJL154C TY1A-NL1Q12391 440 aaKnown RBP2.99□□□□□ -1.93
VPS35YJL154C PBP2P38151 413 aaKnown RBP RIP-Chip data2.98□□□□□ -1.93not detected
VPS35YJL154C SEA4P38164 1038 aa2.98□□□□□ -1.93
VPS35YJL154C GGA2P38817 585 aaKnown RBP2.98□□□□□ -1.93
VPS35YJL154C AKR1P39010 764 aa2.98□□□□□ -1.93
VPS35YJL154C ALR2P43553 858 aa2.98□□□□□ -1.93
VPS35YJL154C YDL124WQ07551 312 aaKnown RBP2.98□□□□□ -1.93
VPS35YJL154C FLC1Q08967 793 aa2.98□□□□□ -1.93
VPS35YJL154C COQ4O13525 335 aa2.98□□□□□ -1.93
VPS35YJL154C PPH3P32345 308 aa2.98□□□□□ -1.93
VPS35YJL154C CDC11P32458 415 aa2.98□□□□□ -1.93
VPS35YJL154C GPB2P39717 880 aa2.98□□□□□ -1.93
VPS35YJL154C MSH4P40965 878 aaPredicted RBP2.98□□□□□ -1.93
VPS35YJL154C RPS4AP0CX35 261 aaKnown RBP2.97□□□□□ -1.93
VPS35YJL154C RPS4BP0CX36 261 aaKnown RBP2.97□□□□□ -1.93
VPS35YJL154C SBP1P10080 294 aaKnown RBP2.97□□□□□ -1.93
VPS35YJL154C KIP1P28742 1111 aa2.97□□□□□ -1.93
VPS35YJL154C AAR2P32357 355 aaPredicted RBP2.97□□□□□ -1.93
VPS35YJL154C AFG2P32794 780 aa2.97□□□□□ -1.93
VPS35YJL154C RRP14P36080 434 aaKnown RBP2.97□□□□□ -1.93
VPS35YJL154C MCX1P38323 520 aaPredicted RBP2.97□□□□□ -1.93
VPS35YJL154C CHZ1P40019 153 aaPredicted RBP2.97□□□□□ -1.93
VPS35YJL154C BUD9P53226 547 aa2.97□□□□□ -1.93
VPS35YJL154C NCE103P53615 221 aa2.97□□□□□ -1.93
VPS35YJL154C UBP3Q01477 912 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
VPS35YJL154C RPN4Q03465 531 aa2.97□□□□□ -1.93
VPS35YJL154C YPR053CQ6Q5F3 151 aa2.97□□□□□ -1.93
VPS35YJL154C CIT1P00890 479 aa2.97□□□□□ -1.93
VPS35YJL154C NMD3P38861 518 aaKnown RBP2.97□□□□□ -1.93
VPS35YJL154C CCC2P38995 1004 aa2.97□□□□□ -1.93
VPS35YJL154C MBP1P39678 833 aa2.97□□□□□ -1.93
VPS35YJL154C PRY1P47032 299 aa2.97□□□□□ -1.93
VPS35YJL154C YPL062WQ02781 134 aa2.97□□□□□ -1.93
VPS35YJL154C YDR306CQ06640 478 aa2.97□□□□□ -1.93
VPS35YJL154C FMP25Q08023 583 aa2.97□□□□□ -1.93
VPS35YJL154C RSB1Q08417 382 aa2.97□□□□□ -1.93
VPS35YJL154C PHM7Q12252 991 aa2.97□□□□□ -1.93
VPS35YJL154C AI3P03877 415 aa2.97□□□□□ -1.93
VPS35YJL154C MET6P05694 767 aaKnown RBP2.97□□□□□ -1.93
VPS35YJL154C MPH1P40562 993 aa2.97□□□□□ -1.93
VPS35YJL154C YJL045WP47052 634 aa2.97□□□□□ -1.93
VPS35YJL154C TNA1P53322 534 aa2.97□□□□□ -1.93
VPS35YJL154C YLR125WQ12138 136 aa2.97□□□□□ -1.93
VPS35YJL154C RPL8BP29453 256 aaKnown RBP2.96□□□□□ -1.94
VPS35YJL154C CCZ1P38273 704 aa2.96□□□□□ -1.94
VPS35YJL154C NUP82P40368 713 aa2.96□□□□□ -1.94
VPS35YJL154C MMM1P41800 426 aa2.96□□□□□ -1.94
VPS35YJL154C SRP1Q02821 542 aaKnown RBP2.96□□□□□ -1.94
VPS35YJL154C DUS3Q06053 668 aaKnown RBP2.96□□□□□ -1.94
VPS35YJL154C UBX5Q06682 500 aa2.96□□□□□ -1.94
VPS35YJL154C NBA1Q08229 501 aaKnown RBP2.96□□□□□ -1.94
VPS35YJL154C PUS7Q08647 676 aaKnown RBP2.96□□□□□ -1.94
VPS35YJL154C THS1P04801 734 aaKnown RBP2.96□□□□□ -1.94
VPS35YJL154C PHO8P11491 566 aa2.96□□□□□ -1.94
VPS35YJL154C ARI1P53111 347 aaKnown RBP2.96□□□□□ -1.94
VPS35YJL154C PUS1Q12211 544 aaKnown RBP2.96□□□□□ -1.94
VPS35YJL154C CIT2P08679 460 aa2.95□□□□□ -1.94
VPS35YJL154C THI4P32318 326 aa2.95□□□□□ -1.94
VPS35YJL154C WHI3P34761 661 aaKnown RBP2.95□□□□□ -1.94
VPS35YJL154C MDJ1P35191 511 aa2.95□□□□□ -1.94
VPS35YJL154C FPR3P38911 411 aaKnown RBP2.95□□□□□ -1.94
VPS35YJL154C RSP5P39940 809 aaKnown RBP2.95□□□□□ -1.94
VPS35YJL154C SAH1P39954 449 aaKnown RBP2.95□□□□□ -1.94
VPS35YJL154C CIT3P43635 486 aa2.95□□□□□ -1.94
VPS35YJL154C HOS3Q02959 697 aaKnown RBP2.95□□□□□ -1.94
VPS35YJL154C POB3Q04636 552 aaKnown RBP2.95□□□□□ -1.94
VPS35YJL154C YOR059CQ08448 450 aaKnown RBP2.95□□□□□ -1.94
VPS35YJL154C TOM70P07213 617 aaKnown RBP2.95□□□□□ -1.94
VPS35YJL154C YER152CP10356 443 aa2.95□□□□□ -1.94
VPS35YJL154C TIM23P32897 222 aa2.95□□□□□ -1.94
VPS35YJL154C STE5P32917 917 aa2.95□□□□□ -1.94
VPS35YJL154C YHL012WP38709 493 aa2.95□□□□□ -1.94
VPS35YJL154C ALG12P53730 551 aa2.95□□□□□ -1.94
VPS35YJL154C ADE8P04161 214 aa2.94□□□□□ -1.94
VPS35YJL154C RPN3P40016 523 aaKnown RBP2.94□□□□□ -1.94
VPS35YJL154C ALT1P52893 592 aa2.94□□□□□ -1.94
VPS35YJL154C UTP8P53276 713 aaKnown RBP2.94□□□□□ -1.94
VPS35YJL154C MTC5Q03897 1148 aa2.94□□□□□ -1.94
VPS35YJL154C YPL066WQ12194 479 aa2.94□□□□□ -1.94
VPS35YJL154C CHS2P14180 963 aa2.94□□□□□ -1.94
VPS35YJL154C YSC84P32793 468 aa2.94□□□□□ -1.94
VPS35YJL154C RCM1P53972 490 aa2.94□□□□□ -1.94
VPS35YJL154C YDR215CQ12240 137 aa2.94□□□□□ -1.94
VPS35YJL154C NAM7P30771 971 aaKnown RBP2.93□□□□□ -1.94
VPS35YJL154C YRO2P38079 344 aa2.93□□□□□ -1.94
VPS35YJL154C TAT2P38967 592 aa2.93□□□□□ -1.94
VPS35YJL154C FOL2P51601 243 aaKnown RBP2.93□□□□□ -1.94
VPS35YJL154C ACM1Q08981 209 aa2.93□□□□□ -1.94
VPS35YJL154C CAN1P04817 590 aa2.93□□□□□ -1.94
VPS35YJL154C RPL11AP0C0W9 174 aaKnown RBP2.93□□□□□ -1.94
VPS35YJL154C DOM34P33309 386 aa2.93□□□□□ -1.94
VPS35YJL154C SAF1P38352 637 aa2.93□□□□□ -1.94
VPS35YJL154C GEM1P39722 662 aa2.93□□□□□ -1.94
VPS35YJL154C SLN1P39928 1220 aaPredicted RBP2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms