RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W VMA2P16140 517 aaKnown RBP7.47□□□□□ -1.21
PRE3YJL001W GCD7P32502 381 aaPredicted RBP7.47□□□□□ -1.21
PRE3YJL001W ERP5P38819 212 aa7.47□□□□□ -1.21
PRE3YJL001W GPB2P39717 880 aa7.47□□□□□ -1.21
PRE3YJL001W BDP1P46678 594 aa7.47□□□□□ -1.21
PRE3YJL001W YJR107WP47145 328 aa7.47□□□□□ -1.21
PRE3YJL001W SYH1Q02875 849 aaKnown RBP7.47□□□□□ -1.21
PRE3YJL001W PNP1Q05788 311 aa7.47□□□□□ -1.21
PRE3YJL001W PRE8P23639 250 aa7.46□□□□□ -1.22
PRE3YJL001W RGT1P32862 1170 aa7.46□□□□□ -1.22
PRE3YJL001W KSP1P38691 1029 aaKnown RBP7.46□□□□□ -1.22
PRE3YJL001W VPS27P40343 622 aaKnown RBP7.46□□□□□ -1.22
PRE3YJL001W DUS4Q06063 367 aa7.46□□□□□ -1.22
PRE3YJL001W TRS33Q99394 268 aa7.46□□□□□ -1.22
PRE3YJL001W HIP1P06775 603 aa7.45□□□□□ -1.22
PRE3YJL001W SRM1P21827 482 aa7.45□□□□□ -1.22
PRE3YJL001W KTR3P38130 404 aaPredicted RBP7.45□□□□□ -1.22
PRE3YJL001W EMW1P42842 904 aaKnown RBP7.45□□□□□ -1.22
PRE3YJL001W SEC20P28791 383 aa7.44□□□□□ -1.22
PRE3YJL001W FUN12P39730 1002 aaKnown RBP7.44□□□□□ -1.22
PRE3YJL001W SPO1P53541 631 aa7.44□□□□□ -1.22
PRE3YJL001W YPL260WQ08977 551 aa7.44□□□□□ -1.22
PRE3YJL001W KTR2P33550 425 aa7.43□□□□□ -1.22
PRE3YJL001W YNG2P38806 282 aaKnown RBP7.43□□□□□ -1.22
PRE3YJL001W YIL092WP40497 633 aa7.43□□□□□ -1.22
PRE3YJL001W SKG3Q06315 1026 aa7.43□□□□□ -1.22
PRE3YJL001W TOR2P32600 2474 aaKnown RBP7.43□□□□□ -1.22
PRE3YJL001W FUR4P05316 633 aaKnown RBP7.42□□□□□ -1.22
PRE3YJL001W TRL1P09880 827 aaKnown RBP7.42□□□□□ -1.22
PRE3YJL001W DAL5P15365 543 aa7.42□□□□□ -1.22
PRE3YJL001W GRS1P38088 690 aaKnown RBP7.42□□□□□ -1.22
PRE3YJL001W MSC7P38694 644 aa7.42□□□□□ -1.22
PRE3YJL001W YAF9P53930 226 aa7.42□□□□□ -1.22
PRE3YJL001W UBR2Q07963 1872 aa7.42□□□□□ -1.22
PRE3YJL001W CYT1P07143 309 aa7.41□□□□□ -1.22
PRE3YJL001W RPS6AP0CX37 236 aaKnown RBP7.41□□□□□ -1.22
PRE3YJL001W RPS6BP0CX38 236 aaPredicted RBP7.41□□□□□ -1.22
PRE3YJL001W UTR2P32623 467 aa7.41□□□□□ -1.22
PRE3YJL001W UTR4P32626 227 aa7.41□□□□□ -1.22
PRE3YJL001W MKS1P34072 584 aa7.41□□□□□ -1.22
PRE3YJL001W BOL3P39724 118 aa7.41□□□□□ -1.22
PRE3YJL001W YGL242CP53066 181 aa7.41□□□□□ -1.22
PRE3YJL001W YGR125WP53273 1036 aa7.41□□□□□ -1.22
PRE3YJL001W ALD6P54115 500 aaKnown RBP7.41□□□□□ -1.22
PRE3YJL001W ISU1Q03020 165 aa7.41□□□□□ -1.22
PRE3YJL001W NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.41□□□□□ -1.22not detected
PRE3YJL001W BUL2Q03758 920 aaKnown RBP7.41□□□□□ -1.22
PRE3YJL001W MSC6Q08818 692 aaKnown RBP7.41□□□□□ -1.22
PRE3YJL001W CDC19P00549 500 aaKnown RBP7.4□□□□□ -1.22
PRE3YJL001W SPT2P06843 333 aaPredicted RBP7.4□□□□□ -1.22
PRE3YJL001W SRP40P32583 406 aaPredicted RBP7.4□□□□□ -1.22
PRE3YJL001W FBP26P32604 452 aa7.4□□□□□ -1.22
PRE3YJL001W NOC2P39744 710 aaKnown RBP7.4□□□□□ -1.22
PRE3YJL001W YMR147WP40218 223 aaKnown RBP7.4□□□□□ -1.22
PRE3YJL001W IOC3P43596 787 aa7.4□□□□□ -1.22
PRE3YJL001W PTK2P47116 818 aaKnown RBP7.4□□□□□ -1.22
PRE3YJL001W CDC45Q08032 650 aa7.4□□□□□ -1.22
PRE3YJL001W RVB2Q12464 471 aaKnown RBP7.4□□□□□ -1.22
PRE3YJL001W NCB2Q92317 146 aa7.4□□□□□ -1.22
PRE3YJL001W CHS3P29465 1165 aa7.39□□□□□ -1.23
PRE3YJL001W TBS1P38114 1094 aa7.39□□□□□ -1.23
PRE3YJL001W YHL050CP38721 697 aa7.39□□□□□ -1.23
PRE3YJL001W TOM71P38825 639 aaKnown RBP7.39□□□□□ -1.23
PRE3YJL001W YHR219WP38900 624 aa7.39□□□□□ -1.23
PRE3YJL001W AIR1P40507 360 aaKnown RBP7.39□□□□□ -1.23
PRE3YJL001W MDJ2P42834 146 aa7.39□□□□□ -1.23
PRE3YJL001W IRC8P47046 822 aa7.39□□□□□ -1.23
PRE3YJL001W SWI5P08153 709 aa7.38□□□□□ -1.23
PRE3YJL001W RAD18P10862 487 aa7.38□□□□□ -1.23
PRE3YJL001W DAT1P13483 248 aaKnown RBP7.38□□□□□ -1.23
PRE3YJL001W RRN6P32786 894 aa7.38□□□□□ -1.23
PRE3YJL001W YKR018CP36114 725 aa7.38□□□□□ -1.23
PRE3YJL001W SKP2P42843 763 aa7.38□□□□□ -1.23
PRE3YJL001W SCS3P53012 380 aa7.38□□□□□ -1.23
PRE3YJL001W SOL4P53315 255 aa7.38□□□□□ -1.23
PRE3YJL001W ALO1P54783 526 aaKnown RBP7.38□□□□□ -1.23
PRE3YJL001W NOT3P06102 836 aaKnown RBP7.37□□□□□ -1.23
PRE3YJL001W CDC4P07834 779 aa7.37□□□□□ -1.23
PRE3YJL001W SAM2P19358 384 aaKnown RBP7.37□□□□□ -1.23
PRE3YJL001W YUR1P26725 428 aa7.37□□□□□ -1.23
PRE3YJL001W SUV3P32580 737 aa7.37□□□□□ -1.23
PRE3YJL001W PHO88P38264 188 aaPredicted RBP7.37□□□□□ -1.23
PRE3YJL001W YHR131CP38835 850 aa7.37□□□□□ -1.23
PRE3YJL001W BRE2P43132 505 aa7.37□□□□□ -1.23
PRE3YJL001W YDR524C-BQ3E6R4 66 aa7.37□□□□□ -1.23
PRE3YJL001W RPP2BP02400 110 aaKnown RBP7.36□□□□□ -1.23
PRE3YJL001W HEM1P09950 548 aaPredicted RBP7.36□□□□□ -1.23
PRE3YJL001W ASF1P32447 279 aa7.36□□□□□ -1.23
PRE3YJL001W MRT4P33201 236 aaKnown RBP7.36□□□□□ -1.23
PRE3YJL001W TGL1P34163 548 aa7.36□□□□□ -1.23
PRE3YJL001W RTS1P38903 757 aa7.36□□□□□ -1.23
PRE3YJL001W VID27P40157 782 aa7.36□□□□□ -1.23
PRE3YJL001W QDR1P40475 563 aa7.36□□□□□ -1.23
PRE3YJL001W YRB30P53107 440 aaPredicted RBP7.36□□□□□ -1.23
PRE3YJL001W GCR2Q01722 534 aa7.36□□□□□ -1.23
PRE3YJL001W RMD1Q03441 430 aa7.36□□□□□ -1.23
PRE3YJL001W HED1Q03937 162 aa7.36□□□□□ -1.23
PRE3YJL001W RAD61Q99359 647 aa7.36□□□□□ -1.23
PRE3YJL001W TOR1P35169 2470 aa7.36□□□□□ -1.23
PRE3YJL001W MOT1P32333 1867 aa7.35□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 69.4 ms