RNA–Protein interactions for RNA: YIL167W

SDL1, Transcript of Open reading frame unlikely to produce a functional protein in S288C, yeast

Gene SDL1, Length 633 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDL1	YIL167W	NBA1	Q08229	501 aa	Known RBP	4.66	□□□□□ -1.66
SDL1	YIL167W	SPO21	Q12411	609 aa		4.66	□□□□□ -1.66
SDL1	YIL167W	DFG16	Q99234	619 aa		4.66	□□□□□ -1.66
SDL1	YIL167W	ELM1	P32801	640 aa		4.65	□□□□□ -1.67
SDL1	YIL167W	PIK1	P39104	1066 aa		4.65	□□□□□ -1.67
SDL1	YIL167W	MPH1	P40562	993 aa		4.65	□□□□□ -1.67
SDL1	YIL167W	GTS1	P40956	396 aa		4.65	□□□□□ -1.67
SDL1	YIL167W	TIF35	Q04067	274 aa	Known RBP	4.65	□□□□□ -1.67
SDL1	YIL167W	RSC58	Q07979	502 aa		4.65	□□□□□ -1.67
SDL1	YIL167W	SNF5	P18480	905 aa		4.64	□□□□□ -1.67
SDL1	YIL167W	LYP1	P32487	611 aa		4.64	□□□□□ -1.67
SDL1	YIL167W	POL12	P38121	705 aa	Predicted RBP	4.64	□□□□□ -1.67
SDL1	YIL167W	YGR053C	P53234	283 aa		4.64	□□□□□ -1.67
SDL1	YIL167W	AOS1	Q06624	347 aa		4.64	□□□□□ -1.67
SDL1	YIL167W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
SDL1	YIL167W	MLS1	P30952	554 aa		4.63	□□□□□ -1.67
SDL1	YIL167W	LRG1	P35688	1017 aa		4.63	□□□□□ -1.67
SDL1	YIL167W	GPB2	P39717	880 aa		4.63	□□□□□ -1.67
SDL1	YIL167W	NIT1	P40447	199 aa		4.63	□□□□□ -1.67
SDL1	YIL167W	KRI1	P42846	591 aa	Known RBP	4.63	□□□□□ -1.67
SDL1	YIL167W	FOL2	P51601	243 aa	Known RBP	4.63	□□□□□ -1.67
SDL1	YIL167W	EEB1	Q02891	456 aa		4.63	□□□□□ -1.67
SDL1	YIL167W	PIN2	Q12057	282 aa		4.63	□□□□□ -1.67
SDL1	YIL167W	GNT1	Q12096	491 aa		4.63	□□□□□ -1.67
SDL1	YIL167W	TRP2	P00899	507 aa	Known RBP	4.62	□□□□□ -1.67
SDL1	YIL167W	SNF7	P39929	240 aa	Known RBP	4.62	□□□□□ -1.67
SDL1	YIL167W	AVT1	P47082	602 aa		4.62	□□□□□ -1.67
SDL1	YIL167W	TYW3	P53177	273 aa		4.62	□□□□□ -1.67
SDL1	YIL167W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
SDL1	YIL167W	VPS16	Q03308	798 aa		4.62	□□□□□ -1.67
SDL1	YIL167W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
SDL1	YIL167W	RCL1	Q08096	367 aa	Predicted RBP	4.62	□□□□□ -1.67
SDL1	YIL167W	YER152C	P10356	443 aa		4.61	□□□□□ -1.67
SDL1	YIL167W	AIM26	P32858	118 aa		4.61	□□□□□ -1.67
SDL1	YIL167W	IRC24	P40580	263 aa		4.61	□□□□□ -1.67
SDL1	YIL167W	MAD1	P40957	749 aa		4.61	□□□□□ -1.67
SDL1	YIL167W	RKM4	Q12504	494 aa		4.61	□□□□□ -1.67
SDL1	YIL167W	SPS1	P08458	490 aa		4.6	□□□□□ -1.67
SDL1	YIL167W	SEG2	P34250	1132 aa		4.6	□□□□□ -1.67
SDL1	YIL167W	PAM1	P37304	830 aa	Known RBP	4.6	□□□□□ -1.67
SDL1	YIL167W	MCM7	P38132	845 aa		4.6	□□□□□ -1.67
SDL1	YIL167W	SEC26	P41810	973 aa	Known RBP	4.6	□□□□□ -1.67
SDL1	YIL167W	SPO20	Q04359	397 aa		4.6	□□□□□ -1.67
SDL1	YIL167W	RSB1	Q08417	382 aa		4.6	□□□□□ -1.67
SDL1	YIL167W	GEM1	P39722	662 aa		4.59	□□□□□ -1.67
SDL1	YIL167W	PRP43	P53131	767 aa	Known RBP	4.59	□□□□□ -1.67
SDL1	YIL167W	JIP5	Q06214	492 aa	Predicted RBP	4.59	□□□□□ -1.67
SDL1	YIL167W	ATG13	Q06628	738 aa		4.59	□□□□□ -1.67
SDL1	YIL167W	THS1	P04801	734 aa	Known RBP	4.58	□□□□□ -1.68
SDL1	YIL167W	INO1	P11986	533 aa		4.58	□□□□□ -1.68
SDL1	YIL167W	TSA1	P34760	196 aa	Known RBP	4.58	□□□□□ -1.68
SDL1	YIL167W	PNT1	P38969	423 aa		4.58	□□□□□ -1.68
SDL1	YIL167W	FAA4	P47912	694 aa	Known RBP	4.58	□□□□□ -1.68
SDL1	YIL167W	GDE1	Q02979	1223 aa		4.58	□□□□□ -1.68
SDL1	YIL167W	ACM1	Q08981	209 aa		4.58	□□□□□ -1.68
SDL1	YIL167W	RPL11A	P0C0W9	174 aa	Known RBP	4.57	□□□□□ -1.68
SDL1	YIL167W	BAS1	P22035	811 aa		4.57	□□□□□ -1.68
SDL1	YIL167W	AGP1	P25376	633 aa		4.57	□□□□□ -1.68
SDL1	YIL167W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
SDL1	YIL167W	YKL107W	P34251	309 aa		4.57	□□□□□ -1.68
SDL1	YIL167W	SNO2	P53823	222 aa		4.57	□□□□□ -1.68
SDL1	YIL167W	SPP382	Q06411	708 aa	Predicted RBP	4.57	□□□□□ -1.68
SDL1	YIL167W	CDA2	Q06703	312 aa		4.57	□□□□□ -1.68
SDL1	YIL167W	YDL177C	Q12257	170 aa		4.57	□□□□□ -1.68
SDL1	YIL167W	RPL11B	Q3E757	174 aa	Predicted RBP	4.57	□□□□□ -1.68
SDL1	YIL167W	GAS1	P22146	559 aa	Known RBP	4.56	□□□□□ -1.68
SDL1	YIL167W	RRT14	P40470	206 aa		4.56	□□□□□ -1.68
SDL1	YIL167W	CWC24	P53769	259 aa		4.56	□□□□□ -1.68
SDL1	YIL167W	MRPL22	P53881	309 aa		4.56	□□□□□ -1.68
SDL1	YIL167W	YPL066W	Q12194	479 aa		4.56	□□□□□ -1.68
SDL1	YIL167W	SBA1	P28707	216 aa	Known RBP	4.55	□□□□□ -1.68
SDL1	YIL167W	SLA2	P33338	968 aa		4.55	□□□□□ -1.68
SDL1	YIL167W	RFC5	P38251	354 aa		4.55	□□□□□ -1.68
SDL1	YIL167W	ETP1	P38748	585 aa	Known RBP	4.55	□□□□□ -1.68
SDL1	YIL167W	MXR1	P40029	184 aa		4.55	□□□□□ -1.68
SDL1	YIL167W	YGL176C	P46945	554 aa		4.55	□□□□□ -1.68
SDL1	YIL167W	PRP6	P19735	899 aa	Predicted RBP	4.54	□□□□□ -1.68
SDL1	YIL167W	DBP2	P24783	546 aa	Known RBP	4.54	□□□□□ -1.68
SDL1	YIL167W	RNQ1	P25367	405 aa		4.54	□□□□□ -1.68
SDL1	YIL167W	MOT2	P34909	587 aa	Known RBP	4.54	□□□□□ -1.68
SDL1	YIL167W	ABZ1	P37254	787 aa	Predicted RBP	4.54	□□□□□ -1.68
SDL1	YIL167W	UGA2	P38067	497 aa		4.54	□□□□□ -1.68
SDL1	YIL167W	UBP5	P39944	805 aa		4.54	□□□□□ -1.68
SDL1	YIL167W	SIP5	P40210	489 aa	Known RBP	4.54	□□□□□ -1.68
SDL1	YIL167W	YFL054C	P43549	646 aa		4.54	□□□□□ -1.68
SDL1	YIL167W	NOP7	P53261	605 aa	Known RBP	4.54	□□□□□ -1.68
SDL1	YIL167W	RSM24	Q03976	319 aa		4.54	□□□□□ -1.68
SDL1	YIL167W	SHE9	Q04172	456 aa		4.54	□□□□□ -1.68
SDL1	YIL167W	YLR225C	Q05948	407 aa	Known RBP	4.54	□□□□□ -1.68
SDL1	YIL167W	OPI10	Q08202	246 aa		4.54	□□□□□ -1.68
SDL1	YIL167W	FAL1	Q12099	399 aa	Known RBP	4.54	□□□□□ -1.68
SDL1	YIL167W	YLL058W	Q12198	575 aa		4.54	□□□□□ -1.68
SDL1	YIL167W	SVS1	Q12254	260 aa		4.54	□□□□□ -1.68
SDL1	YIL167W	SOD2	P00447	233 aa		4.53	□□□□□ -1.68
SDL1	YIL167W	KIN2	P13186	1147 aa	Known RBP	4.53	□□□□□ -1.68
SDL1	YIL167W	RIM8	P53179	542 aa		4.53	□□□□□ -1.68
SDL1	YIL167W	SIZ1	Q04195	904 aa		4.53	□□□□□ -1.68
SDL1	YIL167W	ACE2	P21192	770 aa		4.52	□□□□□ -1.69
SDL1	YIL167W	SGD1	Q06132	899 aa		4.52	□□□□□ -1.69
SDL1	YIL167W	YOR352W	Q08816	343 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms