RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W YGR273CP53329 174 aa11.57□□□□□ -0.56
UBA4YHR111W MIP1P15801 1254 aa11.56□□□□□ -0.56
UBA4YHR111W ISW1P38144 1129 aa11.56□□□□□ -0.56
UBA4YHR111W BUD6P41697 788 aa11.56□□□□□ -0.56
UBA4YHR111W ENT3P47160 408 aa11.56□□□□□ -0.56
UBA4YHR111W NAF1P53919 492 aaKnown RBP11.56□□□□□ -0.56
UBA4YHR111W PSK2Q08217 1101 aa11.56□□□□□ -0.56
UBA4YHR111W YLL058WQ12198 575 aa11.56□□□□□ -0.56
UBA4YHR111W CEX1Q12453 761 aa11.56□□□□□ -0.56
UBA4YHR111W CDC6P09119 513 aa11.55□□□□□ -0.56
UBA4YHR111W HEM1P09950 548 aaPredicted RBP11.55□□□□□ -0.56
UBA4YHR111W SNA3P14359 133 aa11.55□□□□□ -0.56
UBA4YHR111W VPS1P21576 704 aaKnown RBP11.55□□□□□ -0.56
UBA4YHR111W UBP11P36026 717 aa11.55□□□□□ -0.56
UBA4YHR111W HMF1P40037 129 aaKnown RBP11.55□□□□□ -0.56
UBA4YHR111W CIT3P43635 486 aa11.55□□□□□ -0.56
UBA4YHR111W RET3P53600 189 aa11.55□□□□□ -0.56
UBA4YHR111W DSE4P53753 1117 aa11.55□□□□□ -0.56
UBA4YHR111W AIM33Q04516 312 aa11.55□□□□□ -0.56
UBA4YHR111W CSM3Q04659 317 aa11.55□□□□□ -0.56
UBA4YHR111W YDR524C-BQ3E6R4 66 aa11.55□□□□□ -0.56
UBA4YHR111W MSC2Q03455 724 aa11.54□□□□□ -0.56
UBA4YHR111W TVP38P36164 337 aa11.53□□□□□ -0.56
UBA4YHR111W VPS72Q03388 795 aa11.53□□□□□ -0.56
UBA4YHR111W LDB19Q12502 818 aa11.53□□□□□ -0.56
UBA4YHR111W ATG11Q12527 1178 aa11.53□□□□□ -0.56
UBA4YHR111W HSP82P02829 709 aaKnown RBP11.52□□□□□ -0.57
UBA4YHR111W RPL19AP0CX82 189 aaKnown RBP11.52□□□□□ -0.57
UBA4YHR111W RPL19BP0CX83 189 aaPredicted RBP11.52□□□□□ -0.57
UBA4YHR111W THR4P16120 514 aaKnown RBP11.52□□□□□ -0.57
UBA4YHR111W ESS1P22696 170 aa11.52□□□□□ -0.57
UBA4YHR111W ASF1P32447 279 aa11.52□□□□□ -0.57
UBA4YHR111W ORC6P38826 435 aa11.52□□□□□ -0.57
UBA4YHR111W GAA1P39012 614 aa11.52□□□□□ -0.57
UBA4YHR111W PHM6Q05637 104 aa11.52□□□□□ -0.57
UBA4YHR111W RLF2Q12495 606 aa11.52□□□□□ -0.57
UBA4YHR111W PGK1P00560 416 aaKnown RBP11.51□□□□□ -0.57
UBA4YHR111W ILV1P00927 576 aaKnown RBP11.51□□□□□ -0.57
UBA4YHR111W KIN82P25341 720 aa11.51□□□□□ -0.57
UBA4YHR111W CNM67P53865 581 aaKnown RBP11.51□□□□□ -0.57
UBA4YHR111W MFM1Q02783 413 aa11.51□□□□□ -0.57
UBA4YHR111W TRS120Q04183 1289 aa11.51□□□□□ -0.57
UBA4YHR111W SVF1Q05515 481 aa11.51□□□□□ -0.57
UBA4YHR111W CRD1Q07560 283 aa11.51□□□□□ -0.57
UBA4YHR111W ELG1Q12050 791 aa11.51□□□□□ -0.57
UBA4YHR111W DUR3P33413 735 aa11.5□□□□□ -0.57
UBA4YHR111W YEL025CP39991 1188 aa11.5□□□□□ -0.57
UBA4YHR111W GPD2P41911 440 aaKnown RBP11.5□□□□□ -0.57
UBA4YHR111W ZPR1P53303 486 aaKnown RBP11.5□□□□□ -0.57
UBA4YHR111W EAR1Q03212 550 aa11.5□□□□□ -0.57
UBA4YHR111W YML020WQ03722 664 aa11.5□□□□□ -0.57
UBA4YHR111W GPI13Q07830 1017 aa11.5□□□□□ -0.57
UBA4YHR111W GET3Q12154 354 aaKnown RBP11.5□□□□□ -0.57
UBA4YHR111W PGM1P33401 570 aaKnown RBP11.49□□□□□ -0.57
UBA4YHR111W GRS1P38088 690 aaKnown RBP11.49□□□□□ -0.57
UBA4YHR111W STT3P39007 718 aaKnown RBP11.49□□□□□ -0.57
UBA4YHR111W AZR1P50080 613 aa11.49□□□□□ -0.57
UBA4YHR111W SLK19Q08581 821 aaKnown RBP11.49□□□□□ -0.57
UBA4YHR111W DCS2Q12123 353 aa11.49□□□□□ -0.57
UBA4YHR111W TIP41Q12199 356 aa11.49□□□□□ -0.57
UBA4YHR111W FKS1P38631 1876 aaKnown RBP11.48□□□□□ -0.57
UBA4YHR111W AFT1P22149 690 aa11.48□□□□□ -0.57
UBA4YHR111W GSY1P23337 708 aa11.48□□□□□ -0.57
UBA4YHR111W TTI1P36097 1038 aa11.48□□□□□ -0.57
UBA4YHR111W RFC5P38251 354 aa11.48□□□□□ -0.57
UBA4YHR111W ATG32P40458 529 aa11.48□□□□□ -0.57
UBA4YHR111W PSP2P50109 593 aaKnown RBP11.48□□□□□ -0.57
UBA4YHR111W VPS20Q04272 221 aa11.48□□□□□ -0.57
UBA4YHR111W MOT1P32333 1867 aa11.48□□□□□ -0.57
UBA4YHR111W CPA2P03965 1118 aaKnown RBP11.47□□□□□ -0.57
UBA4YHR111W POT1P27796 417 aaKnown RBP RIP-Chip data11.47□□□□□ -0.57not detected
UBA4YHR111W SUV3P32580 737 aa11.47□□□□□ -0.57
UBA4YHR111W MDR1P53258 950 aa11.47□□□□□ -0.57
UBA4YHR111W YPL150WQ12152 901 aa11.47□□□□□ -0.57
UBA4YHR111W NBL1Q3E7Y6 73 aa11.47□□□□□ -0.57
UBA4YHR111W HIP1P06775 603 aa11.46□□□□□ -0.57
UBA4YHR111W RME1P32338 300 aaKnown RBP11.46□□□□□ -0.57
UBA4YHR111W BRE2P43132 505 aa11.46□□□□□ -0.57
UBA4YHR111W SGM1P47166 707 aa11.46□□□□□ -0.57
UBA4YHR111W DIP5P53388 608 aa11.46□□□□□ -0.57
UBA4YHR111W YOR296WQ08748 1289 aa11.46□□□□□ -0.57
UBA4YHR111W SUP45P12385 437 aaKnown RBP11.45□□□□□ -0.58
UBA4YHR111W CLN3P13365 580 aa11.45□□□□□ -0.58
UBA4YHR111W CDC48P25694 835 aaKnown RBP11.45□□□□□ -0.58
UBA4YHR111W YKR023WP36119 530 aaKnown RBP11.45□□□□□ -0.58
UBA4YHR111W ALD5P40047 520 aaKnown RBP11.45□□□□□ -0.58
UBA4YHR111W YVH1Q02256 364 aaKnown RBP11.45□□□□□ -0.58
UBA4YHR111W UBC1P21734 215 aaKnown RBP11.44□□□□□ -0.58
UBA4YHR111W IRE1P32361 1115 aa11.44□□□□□ -0.58
UBA4YHR111W SMY2P32909 740 aaKnown RBP11.44□□□□□ -0.58
UBA4YHR111W MSC7P38694 644 aa11.44□□□□□ -0.58
UBA4YHR111W INP51P40559 946 aaKnown RBP11.44□□□□□ -0.58
UBA4YHR111W YIR014WP40570 242 aa11.44□□□□□ -0.58
UBA4YHR111W FOL2P51601 243 aaKnown RBP11.44□□□□□ -0.58
UBA4YHR111W PIL1P53252 339 aaKnown RBP11.44□□□□□ -0.58
UBA4YHR111W YNL115CP53925 644 aa11.44□□□□□ -0.58
UBA4YHR111W EIS1Q05050 843 aaKnown RBP11.44□□□□□ -0.58
UBA4YHR111W YPR117WQ06116 2489 aa11.44□□□□□ -0.58
UBA4YHR111W TVP23P38962 199 aa11.43□□□□□ -0.58
UBA4YHR111W FIS1P40515 155 aa11.43□□□□□ -0.58
Retrieved 100 of 5,963 RNA–protein pairs in 129.3 ms