RNA–Protein interactions for RNA: YHR004C

NEM1, Transcript of Probable catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme, yeastyeast

Gene NEM1, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NEM1YHR004C RSM24Q03976 319 aa7.25□□□□□ -1.25
NEM1YHR004C PNS1Q12412 539 aa7.25□□□□□ -1.25
NEM1YHR004C DED1P06634 604 aaKnown RBP7.24□□□□□ -1.25
NEM1YHR004C HXK1P04806 485 aaKnown RBP7.23□□□□□ -1.25
NEM1YHR004C DOM34P33309 386 aa7.23□□□□□ -1.25
NEM1YHR004C ROT1Q03691 256 aa7.23□□□□□ -1.25
NEM1YHR004C TOS4Q06266 489 aa7.23□□□□□ -1.25
NEM1YHR004C SPO21Q12411 609 aa7.23□□□□□ -1.25
NEM1YHR004C RFC5P38251 354 aa7.22□□□□□ -1.25
NEM1YHR004C FAA3P39002 694 aa7.22□□□□□ -1.25
NEM1YHR004C SNF5P18480 905 aa7.21□□□□□ -1.26
NEM1YHR004C RPT1P33299 467 aaKnown RBP7.21□□□□□ -1.26
NEM1YHR004C MCD1Q12158 566 aa7.21□□□□□ -1.26
NEM1YHR004C SEC20P28791 383 aa7.2□□□□□ -1.26
NEM1YHR004C PIC2P40035 300 aa7.2□□□□□ -1.26
NEM1YHR004C PBP1P53297 722 aaKnown RBP7.2□□□□□ -1.26
NEM1YHR004C URN1Q06525 465 aaKnown RBP7.2□□□□□ -1.26
NEM1YHR004C RXT3Q07458 294 aa7.2□□□□□ -1.26
NEM1YHR004C MRPS18P42847 217 aa7.19□□□□□ -1.26
NEM1YHR004C ENT3P47160 408 aa7.19□□□□□ -1.26
NEM1YHR004C PRE9P23638 258 aaKnown RBP7.18□□□□□ -1.26
NEM1YHR004C TRM2P33753 639 aa7.18□□□□□ -1.26
NEM1YHR004C DUS4Q06063 367 aa7.18□□□□□ -1.26
NEM1YHR004C KIN2P13186 1147 aaKnown RBP7.17□□□□□ -1.26
NEM1YHR004C WHI5Q12416 295 aa7.17□□□□□ -1.26
NEM1YHR004C PLB2Q03674 706 aa7.16□□□□□ -1.26
NEM1YHR004C CMP2P14747 604 aa7.15□□□□□ -1.26
NEM1YHR004C SIW14P53965 281 aa7.15□□□□□ -1.26
NEM1YHR004C ACK1Q07622 623 aaPredicted RBP7.15□□□□□ -1.26
NEM1YHR004C GAL10P04397 699 aa7.14□□□□□ -1.27
NEM1YHR004C STE11P23561 717 aa7.14□□□□□ -1.27
NEM1YHR004C RGD1P38339 666 aa7.14□□□□□ -1.27
NEM1YHR004C YGR122WP53272 402 aa7.14□□□□□ -1.27
NEM1YHR004C MNN10P50108 393 aaKnown RBP7.13□□□□□ -1.27
NEM1YHR004C RAT1Q02792 1006 aaKnown RBP7.13□□□□□ -1.27
NEM1YHR004C ROD1Q02805 837 aa7.13□□□□□ -1.27
NEM1YHR004C GPB1Q08886 897 aa7.13□□□□□ -1.27
NEM1YHR004C CDC20P26309 610 aa7.12□□□□□ -1.27
NEM1YHR004C MKK2P32491 506 aa7.12□□□□□ -1.27
NEM1YHR004C PUS9Q12069 462 aa7.12□□□□□ -1.27
NEM1YHR004C SVS1Q12254 260 aa7.12□□□□□ -1.27
NEM1YHR004C HCM1P25364 564 aa7.11□□□□□ -1.27
NEM1YHR004C SEC8P32855 1065 aa7.11□□□□□ -1.27
NEM1YHR004C APL1P27351 700 aa7.1□□□□□ -1.27
NEM1YHR004C MSE1P48525 536 aa7.1□□□□□ -1.27
NEM1YHR004C MCM6P53091 1017 aaKnown RBP7.1□□□□□ -1.27
NEM1YHR004C TAD3Q9URQ3 322 aa7.1□□□□□ -1.27
NEM1YHR004C SYP1P25623 870 aaKnown RBP7.09□□□□□ -1.27
NEM1YHR004C SRM1P21827 482 aa7.08□□□□□ -1.28
NEM1YHR004C CNN1P43618 361 aa7.08□□□□□ -1.28
NEM1YHR004C VTS1Q08831 523 aaKnown RBP RIP-Chip data7.08□□□□□ -1.28not detected
NEM1YHR004C RAD2P07276 1031 aa7.07□□□□□ -1.28
NEM1YHR004C LST4P34239 828 aa7.07□□□□□ -1.28
NEM1YHR004C SLD2P34252 453 aa7.07□□□□□ -1.28
NEM1YHR004C MAP1Q01662 387 aaKnown RBP RIP-Chip data7.07□□□□□ -1.28not detected
NEM1YHR004C ATG13Q06628 738 aa7.07□□□□□ -1.28
NEM1YHR004C YER152CP10356 443 aa7.06□□□□□ -1.28
NEM1YHR004C MLS1P30952 554 aa7.06□□□□□ -1.28
NEM1YHR004C SIZ1Q04195 904 aa7.06□□□□□ -1.28
NEM1YHR004C TMA10Q06177 86 aa7.06□□□□□ -1.28
NEM1YHR004C MRL1Q06815 381 aa7.06□□□□□ -1.28
NEM1YHR004C PMI40P29952 429 aaKnown RBP7.04□□□□□ -1.28
NEM1YHR004C IPL1P38991 367 aa7.04□□□□□ -1.28
NEM1YHR004C YFL054CP43549 646 aa7.04□□□□□ -1.28
NEM1YHR004C NTO1Q12311 748 aa7.04□□□□□ -1.28
NEM1YHR004C CDC6P09119 513 aa7.03□□□□□ -1.28
NEM1YHR004C CYC8P14922 966 aa7.03□□□□□ -1.28
NEM1YHR004C DBP5P20449 482 aaKnown RBP7.03□□□□□ -1.28
NEM1YHR004C GTF1P53260 183 aaPredicted RBP7.03□□□□□ -1.28
NEM1YHR004C VPS62P53285 467 aa7.03□□□□□ -1.28
NEM1YHR004C RIB2Q12362 591 aaKnown RBP7.03□□□□□ -1.28
NEM1YHR004C MGE1P38523 228 aa7.02□□□□□ -1.28
NEM1YHR004C HXT13P39924 564 aa7.02□□□□□ -1.28
NEM1YHR004C HXT17P53631 564 aa7.02□□□□□ -1.28
NEM1YHR004C HXT15P54854 567 aa7.02□□□□□ -1.28
NEM1YHR004C BAS1P22035 811 aa7.01□□□□□ -1.29
NEM1YHR004C RPS26AP39938 119 aaKnown RBP7.01□□□□□ -1.29
NEM1YHR004C RPS26BP39939 119 aaKnown RBP7.01□□□□□ -1.29
NEM1YHR004C MSC2Q03455 724 aa7.01□□□□□ -1.29
NEM1YHR004C YAP6Q03935 383 aa7.01□□□□□ -1.29
NEM1YHR004C NOP12Q08208 459 aaKnown RBP7.01□□□□□ -1.29
NEM1YHR004C RAD27P26793 382 aa7.01□□□□□ -1.29
NEM1YHR004C AIM21P40563 679 aa7.01□□□□□ -1.29
NEM1YHR004C YLR224WQ05947 369 aa7.01□□□□□ -1.29
NEM1YHR004C THS1P04801 734 aaKnown RBP7□□□□□ -1.29
NEM1YHR004C RRT14P40470 206 aa7□□□□□ -1.29
NEM1YHR004C GNP1P48813 663 aa7□□□□□ -1.29
NEM1YHR004C SUN4P53616 420 aa7□□□□□ -1.29
NEM1YHR004C GCR1P07261 785 aa6.99□□□□□ -1.29
NEM1YHR004C ACE2P21192 770 aa6.99□□□□□ -1.29
NEM1YHR004C EMC1P25574 760 aa6.99□□□□□ -1.29
NEM1YHR004C MPH1P40562 993 aa6.99□□□□□ -1.29
NEM1YHR004C CTF4Q01454 927 aa6.99□□□□□ -1.29
NEM1YHR004C HMI1Q12039 706 aa6.99□□□□□ -1.29
NEM1YHR004C RPP2AP05319 106 aaKnown RBP6.98□□□□□ -1.29
NEM1YHR004C UGA2P38067 497 aa6.98□□□□□ -1.29
NEM1YHR004C GEM1P39722 662 aa6.98□□□□□ -1.29
NEM1YHR004C ACM1Q08981 209 aa6.98□□□□□ -1.29
NEM1YHR004C GNT1Q12096 491 aa6.98□□□□□ -1.29
NEM1YHR004C DCG1P32460 244 aa6.97□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 73.9 ms