RNA–Protein interactions for RNA: YGR247W

CPD1, Transcript of Cyclic nucleotide phosphodiesterase, yeastyeast

Gene CPD1, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPD1YGR247W SYN8P31377 255 aa10.37□□□□□ -0.75
CPD1YGR247W PSP2P50109 593 aaKnown RBP10.37□□□□□ -0.75
CPD1YGR247W INP52P50942 1183 aa10.37□□□□□ -0.75
CPD1YGR247W VID30P53076 958 aa10.37□□□□□ -0.75
CPD1YGR247W MDR1P53258 950 aa10.37□□□□□ -0.75
CPD1YGR247W YNL034WP53963 612 aa10.37□□□□□ -0.75
CPD1YGR247W YNL018CP53976 612 aa10.37□□□□□ -0.75
CPD1YGR247W EST2Q06163 884 aa10.37□□□□□ -0.75
CPD1YGR247W YOR111WQ99210 232 aa10.37□□□□□ -0.75
CPD1YGR247W MSD1P15179 658 aaKnown RBP10.36□□□□□ -0.75
CPD1YGR247W MSS51P32335 436 aa10.36□□□□□ -0.75
CPD1YGR247W ASE1P50275 885 aa10.36□□□□□ -0.75
CPD1YGR247W ARP6Q12509 438 aa10.36□□□□□ -0.75
CPD1YGR247W RAD50P12753 1312 aa10.35□□□□□ -0.75
CPD1YGR247W RNR3P21672 869 aaKnown RBP10.35□□□□□ -0.75
CPD1YGR247W PEP3P27801 918 aa10.35□□□□□ -0.75
CPD1YGR247W SUL1P38359 859 aa10.35□□□□□ -0.75
CPD1YGR247W YEL025CP39991 1188 aa10.35□□□□□ -0.75
CPD1YGR247W MAG2Q06436 670 aaKnown RBP10.35□□□□□ -0.75
CPD1YGR247W GPI13Q07830 1017 aa10.35□□□□□ -0.75
CPD1YGR247W UBC1P21734 215 aaKnown RBP10.34□□□□□ -0.75
CPD1YGR247W OPT1P40897 799 aa10.34□□□□□ -0.75
CPD1YGR247W MMR1Q06324 491 aa10.34□□□□□ -0.75
CPD1YGR247W WHI4Q07655 649 aaKnown RBP10.34□□□□□ -0.75
CPD1YGR247W OXR1Q08952 273 aa10.34□□□□□ -0.75
CPD1YGR247W CIC1P38779 376 aaKnown RBP10.33□□□□□ -0.76
CPD1YGR247W CIT1P00890 479 aa10.32□□□□□ -0.76
CPD1YGR247W ISW1P38144 1129 aa10.32□□□□□ -0.76
CPD1YGR247W SPO71Q03868 1245 aa10.32□□□□□ -0.76
CPD1YGR247W SVF1Q05515 481 aa10.32□□□□□ -0.76
CPD1YGR247W RAD59Q12223 238 aa10.32□□□□□ -0.76
CPD1YGR247W RIF1P29539 1916 aa10.32□□□□□ -0.76
CPD1YGR247W DRE2P36152 348 aa10.31□□□□□ -0.76
CPD1YGR247W SLX1P38324 304 aa10.31□□□□□ -0.76
CPD1YGR247W STB5P38699 743 aa10.31□□□□□ -0.76
CPD1YGR247W CCT3P39077 534 aaKnown RBP10.31□□□□□ -0.76
CPD1YGR247W OYE2Q03558 400 aaKnown RBP10.31□□□□□ -0.76
CPD1YGR247W YDR341CQ05506 607 aaKnown RBP10.31□□□□□ -0.76
CPD1YGR247W PGA3Q12746 312 aaKnown RBP10.31□□□□□ -0.76
CPD1YGR247W UBP11P36026 717 aa10.3□□□□□ -0.76
CPD1YGR247W ZPR1P53303 486 aaKnown RBP10.3□□□□□ -0.76
CPD1YGR247W ORC4P54791 529 aa10.3□□□□□ -0.76
CPD1YGR247W PNG1Q02890 363 aa10.3□□□□□ -0.76
CPD1YGR247W FKS1P38631 1876 aaKnown RBP10.3□□□□□ -0.76
CPD1YGR247W SUV3P32580 737 aa10.29□□□□□ -0.76
CPD1YGR247W BUD2P33314 1104 aa10.29□□□□□ -0.76
CPD1YGR247W DID4P36108 232 aa10.29□□□□□ -0.76
CPD1YGR247W APN2P38207 520 aa10.29□□□□□ -0.76
CPD1YGR247W MUK1Q02866 612 aa10.29□□□□□ -0.76
CPD1YGR247W GDE1Q02979 1223 aa10.29□□□□□ -0.76
CPD1YGR247W PHM6Q05637 104 aa10.29□□□□□ -0.76
CPD1YGR247W YLR455WQ06188 304 aa10.29□□□□□ -0.76
CPD1YGR247W CRD1Q07560 283 aa10.29□□□□□ -0.76
CPD1YGR247W TOR2P32600 2474 aaKnown RBP10.29□□□□□ -0.76
CPD1YGR247W PGK1P00560 416 aaKnown RBP10.28□□□□□ -0.76
CPD1YGR247W PRC1P00729 532 aa10.28□□□□□ -0.76
CPD1YGR247W TIF1P10081 395 aaKnown RBP10.28□□□□□ -0.76
CPD1YGR247W BUD16P39988 312 aa10.28□□□□□ -0.76
CPD1YGR247W SAD1P43589 448 aa10.28□□□□□ -0.76
CPD1YGR247W LCD1Q04377 747 aa10.28□□□□□ -0.76
CPD1YGR247W MET6P05694 767 aaKnown RBP10.27□□□□□ -0.77
CPD1YGR247W STI1P15705 589 aaKnown RBP RIP-Chip data10.27□□□□□ -0.77not detected
CPD1YGR247W SIS2P36024 562 aa10.27□□□□□ -0.77
CPD1YGR247W FAF1P40546 346 aaPredicted RBP10.27□□□□□ -0.77
CPD1YGR247W GCV2P49095 1034 aa10.27□□□□□ -0.77
CPD1YGR247W CNM67P53865 581 aaKnown RBP10.27□□□□□ -0.77
CPD1YGR247W ESS1P22696 170 aa10.26□□□□□ -0.77
CPD1YGR247W SRO9P25567 434 aaKnown RBP10.26□□□□□ -0.77
CPD1YGR247W DSF2P38213 736 aa10.26□□□□□ -0.77
CPD1YGR247W ART5P53244 586 aaKnown RBP10.26□□□□□ -0.77
CPD1YGR247W MAK11P20484 414 aaKnown RBP10.25□□□□□ -0.77
CPD1YGR247W AKR1P39010 764 aa10.25□□□□□ -0.77
CPD1YGR247W CDC48P25694 835 aaKnown RBP10.24□□□□□ -0.77
CPD1YGR247W EFT1P32324 842 aaKnown RBP10.24□□□□□ -0.77
CPD1YGR247W HUL4P40985 892 aa10.24□□□□□ -0.77
CPD1YGR247W ACF4P47129 309 aa10.24□□□□□ -0.77
CPD1YGR247W YGR273CP53329 174 aa10.24□□□□□ -0.77
CPD1YGR247W BNI5P53890 448 aaKnown RBP10.24□□□□□ -0.77
CPD1YGR247W MBR1P23493 339 aa10.23□□□□□ -0.77
CPD1YGR247W PGM1P33401 570 aaKnown RBP10.23□□□□□ -0.77
CPD1YGR247W SAS3P34218 831 aa10.23□□□□□ -0.77
CPD1YGR247W MRPL7P36519 292 aa10.23□□□□□ -0.77
CPD1YGR247W GPD2P41911 440 aaKnown RBP10.23□□□□□ -0.77
CPD1YGR247W HIF1Q12373 385 aa10.23□□□□□ -0.77
CPD1YGR247W BRN1P38170 754 aa10.22□□□□□ -0.77
CPD1YGR247W MMF1P40185 145 aaKnown RBP10.22□□□□□ -0.77
CPD1YGR247W ESL1P40456 1118 aa10.22□□□□□ -0.77
CPD1YGR247W YFL052WP43551 465 aa10.22□□□□□ -0.77
CPD1YGR247W YNL134CP53912 376 aaKnown RBP10.22□□□□□ -0.77
CPD1YGR247W PIG1Q06216 648 aa10.22□□□□□ -0.77
CPD1YGR247W SMD2Q06217 110 aaKnown RBP10.22□□□□□ -0.77
CPD1YGR247W HFI1Q12060 488 aa10.22□□□□□ -0.77
CPD1YGR247W ADK2P26364 225 aa10.21□□□□□ -0.77
CPD1YGR247W RFS1P38234 210 aaKnown RBP10.21□□□□□ -0.77
CPD1YGR247W RXT2P38255 430 aa10.21□□□□□ -0.77
CPD1YGR247W JJJ3P47138 172 aa10.21□□□□□ -0.77
CPD1YGR247W ALT2P52892 507 aa10.21□□□□□ -0.77
CPD1YGR247W ECM23Q02710 187 aa10.21□□□□□ -0.77
CPD1YGR247W AIM33Q04516 312 aa10.21□□□□□ -0.77
CPD1YGR247W CSM3Q04659 317 aa10.21□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 50 ms