RNA–Protein interactions for RNA: YGL021W

ALK1, Transcript of Protein kinase, yeast

Gene ALK1, Length 2,283 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ALK1	YGL021W	NBA1	Q08229	501 aa	Known RBP	2.27	□□□□□ -2.05
ALK1	YGL021W	SPO21	Q12411	609 aa		2.27	□□□□□ -2.05
ALK1	YGL021W	DBP5	P20449	482 aa	Known RBP	2.26	□□□□□ -2.05
ALK1	YGL021W	PET112	P33893	541 aa		2.26	□□□□□ -2.05
ALK1	YGL021W	RER2	P35196	286 aa		2.26	□□□□□ -2.05
ALK1	YGL021W	CCZ1	P38273	704 aa		2.26	□□□□□ -2.05
ALK1	YGL021W	RCL1	Q08096	367 aa	Predicted RBP	2.26	□□□□□ -2.05
ALK1	YGL021W	CDC34	P14682	295 aa		2.26	□□□□□ -2.05
ALK1	YGL021W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	2.26	□□□□□ -2.05	not detected
ALK1	YGL021W	RNQ1	P25367	405 aa		2.26	□□□□□ -2.05
ALK1	YGL021W	MLS1	P30952	554 aa		2.26	□□□□□ -2.05
ALK1	YGL021W	MNR2	P35724	969 aa		2.26	□□□□□ -2.05
ALK1	YGL021W	BAP2	P38084	609 aa		2.26	□□□□□ -2.05
ALK1	YGL021W	NIT1	P40447	199 aa		2.26	□□□□□ -2.05
ALK1	YGL021W	RSB1	Q08417	382 aa		2.26	□□□□□ -2.05
ALK1	YGL021W	SPS1	P08458	490 aa		2.25	□□□□□ -2.05
ALK1	YGL021W	YER152C	P10356	443 aa		2.25	□□□□□ -2.05
ALK1	YGL021W	SNF5	P18480	905 aa		2.25	□□□□□ -2.05
ALK1	YGL021W	GAS1	P22146	559 aa	Known RBP	2.25	□□□□□ -2.05
ALK1	YGL021W	PIK1	P39104	1066 aa		2.25	□□□□□ -2.05
ALK1	YGL021W	NOP7	P53261	605 aa	Known RBP	2.25	□□□□□ -2.05
ALK1	YGL021W	TIF35	Q04067	274 aa	Known RBP	2.25	□□□□□ -2.05
ALK1	YGL021W	DUT1	P33317	147 aa		2.25	□□□□□ -2.05
ALK1	YGL021W	ETP1	P38748	585 aa	Known RBP	2.25	□□□□□ -2.05
ALK1	YGL021W	UBP5	P39944	805 aa		2.25	□□□□□ -2.05
ALK1	YGL021W	MPH1	P40562	993 aa		2.25	□□□□□ -2.05
ALK1	YGL021W	HNT2	P49775	206 aa		2.25	□□□□□ -2.05
ALK1	YGL021W	PRP43	P53131	767 aa	Known RBP	2.25	□□□□□ -2.05
ALK1	YGL021W	ENV11	P53246	860 aa		2.25	□□□□□ -2.05
ALK1	YGL021W	NAP1	P25293	417 aa	Known RBP	2.24	□□□□□ -2.05
ALK1	YGL021W	LYP1	P32487	611 aa		2.24	□□□□□ -2.05
ALK1	YGL021W	MCM7	P38132	845 aa		2.24	□□□□□ -2.05
ALK1	YGL021W	TYW3	P53177	273 aa		2.24	□□□□□ -2.05
ALK1	YGL021W	MRPL22	P53881	309 aa		2.24	□□□□□ -2.05
ALK1	YGL021W	YDL177C	Q12257	170 aa		2.24	□□□□□ -2.05
ALK1	YGL021W	TRP2	P00899	507 aa	Known RBP	2.24	□□□□□ -2.05
ALK1	YGL021W	TSA1	P34760	196 aa	Known RBP	2.24	□□□□□ -2.05
ALK1	YGL021W	MET10	P39692	1035 aa		2.24	□□□□□ -2.05
ALK1	YGL021W	SEC26	P41810	973 aa	Known RBP	2.24	□□□□□ -2.05
ALK1	YGL021W	SNO2	P53823	222 aa		2.24	□□□□□ -2.05
ALK1	YGL021W	EEB1	Q02891	456 aa		2.24	□□□□□ -2.05
ALK1	YGL021W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	2.24	□□□□□ -2.05	not detected
ALK1	YGL021W	SVF1	Q05515	481 aa		2.24	□□□□□ -2.05
ALK1	YGL021W	CDA2	Q06703	312 aa		2.24	□□□□□ -2.05
ALK1	YGL021W	GNT1	Q12096	491 aa		2.24	□□□□□ -2.05
ALK1	YGL021W	MAD1	P40957	749 aa		2.23	□□□□□ -2.05
ALK1	YGL021W	YFL054C	P43549	646 aa		2.23	□□□□□ -2.05
ALK1	YGL021W	SNU71	P53207	620 aa	Known RBP	2.23	□□□□□ -2.05
ALK1	YGL021W	CLN2	P20438	545 aa		2.22	□□□□□ -2.05
ALK1	YGL021W	BAS1	P22035	811 aa		2.22	□□□□□ -2.05
ALK1	YGL021W	RFC5	P38251	354 aa		2.22	□□□□□ -2.05
ALK1	YGL021W	MXR1	P40029	184 aa		2.22	□□□□□ -2.05
ALK1	YGL021W	YGR053C	P53234	283 aa		2.22	□□□□□ -2.05
ALK1	YGL021W	SPO20	Q04359	397 aa		2.22	□□□□□ -2.05
ALK1	YGL021W	SPP382	Q06411	708 aa	Predicted RBP	2.22	□□□□□ -2.05
ALK1	YGL021W	YOR352W	Q08816	343 aa		2.22	□□□□□ -2.05
ALK1	YGL021W	RPL11A	P0C0W9	174 aa	Known RBP	2.22	□□□□□ -2.05
ALK1	YGL021W	INO1	P11986	533 aa		2.22	□□□□□ -2.05
ALK1	YGL021W	MOT2	P34909	587 aa	Known RBP	2.22	□□□□□ -2.05
ALK1	YGL021W	ABZ1	P37254	787 aa	Predicted RBP	2.22	□□□□□ -2.05
ALK1	YGL021W	AIM3	P38266	947 aa	Known RBP	2.22	□□□□□ -2.05
ALK1	YGL021W	GEM1	P39722	662 aa		2.22	□□□□□ -2.05
ALK1	YGL021W	FAA4	P47912	694 aa	Known RBP	2.22	□□□□□ -2.05
ALK1	YGL021W	CWC24	P53769	259 aa		2.22	□□□□□ -2.05
ALK1	YGL021W	GDE1	Q02979	1223 aa		2.22	□□□□□ -2.05
ALK1	YGL021W	RSM24	Q03976	319 aa		2.22	□□□□□ -2.05
ALK1	YGL021W	YLR225C	Q05948	407 aa	Known RBP	2.22	□□□□□ -2.05
ALK1	YGL021W	JIP5	Q06214	492 aa	Predicted RBP	2.22	□□□□□ -2.05
ALK1	YGL021W	RKM4	Q12504	494 aa		2.22	□□□□□ -2.05
ALK1	YGL021W	RPL11B	Q3E757	174 aa	Predicted RBP	2.22	□□□□□ -2.05
ALK1	YGL021W	PRP6	P19735	899 aa	Predicted RBP	2.21	□□□□□ -2.06
ALK1	YGL021W	DBP2	P24783	546 aa	Known RBP	2.21	□□□□□ -2.06
ALK1	YGL021W	UGA2	P38067	497 aa		2.21	□□□□□ -2.06
ALK1	YGL021W	PNT1	P38969	423 aa		2.21	□□□□□ -2.06
ALK1	YGL021W	YGL176C	P46945	554 aa		2.21	□□□□□ -2.06
ALK1	YGL021W	VPS16	Q03308	798 aa		2.21	□□□□□ -2.06
ALK1	YGL021W	ACM1	Q08981	209 aa		2.21	□□□□□ -2.06
ALK1	YGL021W	PIN2	Q12057	282 aa		2.21	□□□□□ -2.06
ALK1	YGL021W	SVS1	Q12254	260 aa		2.21	□□□□□ -2.06
ALK1	YGL021W	CYC1	P00044	109 aa	Predicted RBP	2.21	□□□□□ -2.06
ALK1	YGL021W	RPS13	P05756	151 aa	Known RBP	2.21	□□□□□ -2.06
ALK1	YGL021W	YKL107W	P34251	309 aa		2.21	□□□□□ -2.06
ALK1	YGL021W	THI80	P35202	319 aa		2.21	□□□□□ -2.06
ALK1	YGL021W	LAM1	P38851	1228 aa		2.21	□□□□□ -2.06
ALK1	YGL021W	SNF7	P39929	240 aa	Known RBP	2.21	□□□□□ -2.06
ALK1	YGL021W	RIM8	P53179	542 aa		2.21	□□□□□ -2.06
ALK1	YGL021W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	2.21	□□□□□ -2.06	not detected
ALK1	YGL021W	SGD1	Q06132	899 aa		2.21	□□□□□ -2.06
ALK1	YGL021W	ATG13	Q06628	738 aa		2.21	□□□□□ -2.06
ALK1	YGL021W	YPL277C	Q08989	487 aa		2.21	□□□□□ -2.06
ALK1	YGL021W	YPL066W	Q12194	479 aa		2.21	□□□□□ -2.06
ALK1	YGL021W	SOD2	P00447	233 aa		2.2	□□□□□ -2.06
ALK1	YGL021W	THS1	P04801	734 aa	Known RBP	2.2	□□□□□ -2.06
ALK1	YGL021W	KIN2	P13186	1147 aa	Known RBP	2.2	□□□□□ -2.06
ALK1	YGL021W	APL1	P27351	700 aa		2.2	□□□□□ -2.06
ALK1	YGL021W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	2.2	□□□□□ -2.06	not detected
ALK1	YGL021W	KRI1	P42846	591 aa	Known RBP	2.2	□□□□□ -2.06
ALK1	YGL021W	BI4	P03879	638 aa		2.2	□□□□□ -2.06
ALK1	YGL021W	CMP2	P14747	604 aa		2.2	□□□□□ -2.06
ALK1	YGL021W	ACE2	P21192	770 aa		2.2	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 55.3 ms