RNA–Protein interactions for RNA: YGL003C

CDH1, Transcript of Activator of anaphase-promoting complex/cyclosome (APC/C), yeastyeast

Gene CDH1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDH1YGL003C TAF1P46677 1066 aa3.63□□□□□ -1.83
CDH1YGL003C UTP22P53254 1237 aaPredicted RBP3.63□□□□□ -1.83
CDH1YGL003C RCF1Q03713 159 aa3.63□□□□□ -1.83
CDH1YGL003C YSH1Q06224 779 aaPredicted RBP3.63□□□□□ -1.83
CDH1YGL003C APL5Q08951 932 aaKnown RBP3.63□□□□□ -1.83
CDH1YGL003C YIG1Q08956 461 aa3.63□□□□□ -1.83
CDH1YGL003C HSP42Q12329 375 aa3.63□□□□□ -1.83
CDH1YGL003C SSM4P40318 1319 aa3.63□□□□□ -1.83
CDH1YGL003C GPM1P00950 247 aaKnown RBP3.62□□□□□ -1.83
CDH1YGL003C STI1P15705 589 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
CDH1YGL003C SOK2P53438 785 aaPredicted RBP3.62□□□□□ -1.83
CDH1YGL003C EEB1Q02891 456 aa3.62□□□□□ -1.83
CDH1YGL003C SVL3Q03088 825 aaKnown RBP3.62□□□□□ -1.83
CDH1YGL003C SPO71Q03868 1245 aa3.62□□□□□ -1.83
CDH1YGL003C HDA2Q06629 674 aa3.62□□□□□ -1.83
CDH1YGL003C OPI10Q08202 246 aa3.62□□□□□ -1.83
CDH1YGL003C YLR419WQ06698 1435 aaKnown RBP3.62□□□□□ -1.83
CDH1YGL003C SCP160P06105 1222 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
CDH1YGL003C TY1A-LR4P0C2I8 440 aaKnown RBP3.61□□□□□ -1.83
CDH1YGL003C TY1A-DR6P0CX70 440 aa3.61□□□□□ -1.83
CDH1YGL003C TY1A-ER1P0CX71 440 aa3.61□□□□□ -1.83
CDH1YGL003C TY1A-LR2P0CX72 440 aa3.61□□□□□ -1.83
CDH1YGL003C TY1A-PLP0CX73 440 aa3.61□□□□□ -1.83
CDH1YGL003C TY1A-JR1P0CX74 440 aa3.61□□□□□ -1.83
CDH1YGL003C TY1A-LR3P0CX75 440 aa3.61□□□□□ -1.83
CDH1YGL003C TY1A-ML2P0CX76 440 aa3.61□□□□□ -1.83
CDH1YGL003C ROX1P25042 368 aa3.61□□□□□ -1.83
CDH1YGL003C BRF1P29056 596 aa3.61□□□□□ -1.83
CDH1YGL003C PBP2P38151 413 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
CDH1YGL003C TAT2P38967 592 aa3.61□□□□□ -1.83
CDH1YGL003C GIP2P40036 548 aa3.61□□□□□ -1.83
CDH1YGL003C MTR4P47047 1073 aaKnown RBP3.61□□□□□ -1.83
CDH1YGL003C JJJ3P47138 172 aa3.61□□□□□ -1.83
CDH1YGL003C GRX3Q03835 250 aa3.61□□□□□ -1.83
CDH1YGL003C GIS4Q04233 774 aa3.61□□□□□ -1.83
CDH1YGL003C TDA5Q06417 326 aaKnown RBP3.61□□□□□ -1.83
CDH1YGL003C TY1A-GR1Q12085 440 aa3.61□□□□□ -1.83
CDH1YGL003C FAL1Q12099 399 aaKnown RBP3.61□□□□□ -1.83
CDH1YGL003C CFT2Q12102 859 aaPredicted RBP3.61□□□□□ -1.83
CDH1YGL003C TY1A-PR3Q6Q5H1 440 aaKnown RBP3.61□□□□□ -1.83
CDH1YGL003C VPS5Q92331 675 aa3.61□□□□□ -1.83
CDH1YGL003C TY1A-OLQ92392 440 aaKnown RBP3.61□□□□□ -1.83
CDH1YGL003C STU1P38198 1513 aa3.61□□□□□ -1.83
CDH1YGL003C HEM13P11353 328 aaKnown RBP3.61□□□□□ -1.83
CDH1YGL003C LYP1P32487 611 aa3.61□□□□□ -1.83
CDH1YGL003C SAS3P34218 831 aa3.61□□□□□ -1.83
CDH1YGL003C HXT13P39924 564 aa3.61□□□□□ -1.83
CDH1YGL003C GCV1P48015 400 aa3.61□□□□□ -1.83
CDH1YGL003C HXT17P53631 564 aa3.61□□□□□ -1.83
CDH1YGL003C HXT15P54854 567 aa3.61□□□□□ -1.83
CDH1YGL003C CTF4Q01454 927 aa3.61□□□□□ -1.83
CDH1YGL003C MEC3Q02574 474 aa3.61□□□□□ -1.83
CDH1YGL003C NAN1Q02931 896 aaKnown RBP3.61□□□□□ -1.83
CDH1YGL003C SXM1Q04175 944 aaKnown RBP3.61□□□□□ -1.83
CDH1YGL003C EST2Q06163 884 aa3.61□□□□□ -1.83
CDH1YGL003C BDF2Q07442 638 aa3.61□□□□□ -1.83
CDH1YGL003C CDC53Q12018 815 aaKnown RBP3.61□□□□□ -1.83
CDH1YGL003C DPH6Q12429 685 aa3.61□□□□□ -1.83
CDH1YGL003C SMC4Q12267 1418 aa3.6□□□□□ -1.83
CDH1YGL003C IRC20Q06554 1556 aa3.6□□□□□ -1.83
CDH1YGL003C NAR1P23503 491 aaKnown RBP3.6□□□□□ -1.83
CDH1YGL003C GRX1P25373 110 aaKnown RBP3.6□□□□□ -1.83
CDH1YGL003C MRC1P25588 1096 aa3.6□□□□□ -1.83
CDH1YGL003C JNM1P36224 373 aa3.6□□□□□ -1.83
CDH1YGL003C NEM1P38757 446 aa3.6□□□□□ -1.83
CDH1YGL003C PAN5P38787 379 aa3.6□□□□□ -1.83
CDH1YGL003C SLN1P39928 1220 aaPredicted RBP3.6□□□□□ -1.83
CDH1YGL003C SPF1P39986 1215 aaKnown RBP3.6□□□□□ -1.83
CDH1YGL003C PEA2P40091 420 aa3.6□□□□□ -1.83
CDH1YGL003C RAD26P40352 1085 aa3.6□□□□□ -1.83
CDH1YGL003C MSH4P40965 878 aaPredicted RBP3.6□□□□□ -1.83
CDH1YGL003C BFA1P47113 574 aa3.6□□□□□ -1.83
CDH1YGL003C MTC5Q03897 1148 aa3.6□□□□□ -1.83
CDH1YGL003C RKM2Q03942 479 aa3.6□□□□□ -1.83
CDH1YGL003C UTP5Q04177 643 aaKnown RBP3.6□□□□□ -1.83
CDH1YGL003C SPO20Q04359 397 aa3.6□□□□□ -1.83
CDH1YGL003C YDL176WQ12027 708 aa3.6□□□□□ -1.83
CDH1YGL003C YLL054CQ12244 843 aa3.6□□□□□ -1.83
CDH1YGL003C TRP2P00899 507 aaKnown RBP3.59□□□□□ -1.83
CDH1YGL003C SAC7P17121 654 aa3.59□□□□□ -1.83
CDH1YGL003C PRI2P20457 528 aa3.59□□□□□ -1.83
CDH1YGL003C BAS1P22035 811 aa3.59□□□□□ -1.83
CDH1YGL003C AGP1P25376 633 aa3.59□□□□□ -1.83
CDH1YGL003C GAR1P28007 205 aaKnown RBP3.59□□□□□ -1.83
CDH1YGL003C RER2P35196 286 aa3.59□□□□□ -1.83
CDH1YGL003C ADD66P36040 267 aa3.59□□□□□ -1.83
CDH1YGL003C ALG14P38242 237 aa3.59□□□□□ -1.83
CDH1YGL003C ATG14P38270 344 aa3.59□□□□□ -1.83
CDH1YGL003C UBP12P39538 1254 aa3.59□□□□□ -1.83
CDH1YGL003C SMC3P47037 1230 aa3.59□□□□□ -1.83
CDH1YGL003C YJR142WP47173 342 aa3.59□□□□□ -1.83
CDH1YGL003C GPI8P49018 411 aa3.59□□□□□ -1.83
CDH1YGL003C TYW3P53177 273 aa3.59□□□□□ -1.83
CDH1YGL003C SRP1Q02821 542 aaKnown RBP3.59□□□□□ -1.83
CDH1YGL003C NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
CDH1YGL003C REC8Q12188 680 aa3.59□□□□□ -1.83
CDH1YGL003C CLF1Q12309 687 aaPredicted RBP3.59□□□□□ -1.83
CDH1YGL003C SBA1P28707 216 aaKnown RBP3.58□□□□□ -1.84
CDH1YGL003C HSE1P38753 452 aa3.58□□□□□ -1.84
CDH1YGL003C MNN1P39106 762 aa3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 90.7 ms