RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	RAD27	P26793	382 aa		3.08	□□□□□ -1.92
DOT6	YER088C	MLS1	P30952	554 aa		3.08	□□□□□ -1.92
DOT6	YER088C	YSC84	P32793	468 aa		3.08	□□□□□ -1.92
DOT6	YER088C	CTH1	P47976	325 aa		3.08	□□□□□ -1.92
DOT6	YER088C	RCM1	P53972	490 aa		3.08	□□□□□ -1.92
DOT6	YER088C	OPI10	Q08202	246 aa		3.08	□□□□□ -1.92
DOT6	YER088C	BUD4	P47136	1447 aa		3.08	□□□□□ -1.92
DOT6	YER088C	CYC7	P00045	113 aa		3.07	□□□□□ -1.92
DOT6	YER088C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	3.07	□□□□□ -1.92	not detected
DOT6	YER088C	GPB2	P39717	880 aa		3.07	□□□□□ -1.92
DOT6	YER088C	RPN3	P40016	523 aa	Known RBP	3.07	□□□□□ -1.92
DOT6	YER088C	SIP5	P40210	489 aa	Known RBP	3.07	□□□□□ -1.92
DOT6	YER088C	YFL054C	P43549	646 aa		3.07	□□□□□ -1.92
DOT6	YER088C	YLR225C	Q05948	407 aa	Known RBP	3.07	□□□□□ -1.92
DOT6	YER088C	HRK1	Q08732	759 aa	Known RBP	3.07	□□□□□ -1.92
DOT6	YER088C	YPL260W	Q08977	551 aa		3.07	□□□□□ -1.92
DOT6	YER088C	DBP2	P24783	546 aa	Known RBP	3.07	□□□□□ -1.92
DOT6	YER088C	AGP1	P25376	633 aa		3.07	□□□□□ -1.92
DOT6	YER088C	MOT2	P34909	587 aa	Known RBP	3.07	□□□□□ -1.92
DOT6	YER088C	ATG14	P38270	344 aa		3.07	□□□□□ -1.92
DOT6	YER088C	MED7	Q08278	222 aa		3.07	□□□□□ -1.92
DOT6	YER088C	SPO21	Q12411	609 aa		3.07	□□□□□ -1.92
DOT6	YER088C	INO1	P11986	533 aa		3.06	□□□□□ -1.92
DOT6	YER088C	ABD1	P32783	436 aa	Predicted RBP	3.06	□□□□□ -1.92
DOT6	YER088C	STE5	P32917	917 aa		3.06	□□□□□ -1.92
DOT6	YER088C	SPF1	P39986	1215 aa	Known RBP	3.06	□□□□□ -1.92
DOT6	YER088C	HNT2	P49775	206 aa		3.06	□□□□□ -1.92
DOT6	YER088C	ALO1	P54783	526 aa	Known RBP	3.06	□□□□□ -1.92
DOT6	YER088C	TRE1	Q08919	783 aa		3.06	□□□□□ -1.92
DOT6	YER088C	GNT1	Q12096	491 aa		3.06	□□□□□ -1.92
DOT6	YER088C	RKM4	Q12504	494 aa		3.06	□□□□□ -1.92
DOT6	YER088C	MDS3	P53094	1487 aa		3.06	□□□□□ -1.92
DOT6	YER088C	REV3	P14284	1504 aa		3.06	□□□□□ -1.92
DOT6	YER088C	RPL11A	P0C0W9	174 aa	Known RBP	3.05	□□□□□ -1.92
DOT6	YER088C	PRI2	P20457	528 aa		3.05	□□□□□ -1.92
DOT6	YER088C	TOS1	P38288	455 aa		3.05	□□□□□ -1.92
DOT6	YER088C	PNT1	P38969	423 aa		3.05	□□□□□ -1.92
DOT6	YER088C	CWC24	P53769	259 aa		3.05	□□□□□ -1.92
DOT6	YER088C	ORC3	P54790	616 aa		3.05	□□□□□ -1.92
DOT6	YER088C	SDH1	Q00711	640 aa		3.05	□□□□□ -1.92
DOT6	YER088C	HOS3	Q02959	697 aa	Known RBP	3.05	□□□□□ -1.92
DOT6	YER088C	SHE9	Q04172	456 aa		3.05	□□□□□ -1.92
DOT6	YER088C	FAL1	Q12099	399 aa	Known RBP	3.05	□□□□□ -1.92
DOT6	YER088C	LPX1	Q12405	387 aa	Known RBP	3.05	□□□□□ -1.92
DOT6	YER088C	RPL11B	Q3E757	174 aa	Predicted RBP	3.05	□□□□□ -1.92
DOT6	YER088C	HIR3	P47171	1648 aa		3.05	□□□□□ -1.92
DOT6	YER088C	BAS1	P22035	811 aa		3.05	□□□□□ -1.92
DOT6	YER088C	SRO9	P25567	434 aa	Known RBP	3.05	□□□□□ -1.92
DOT6	YER088C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	3.05	□□□□□ -1.92	not detected
DOT6	YER088C	MCM7	P38132	845 aa		3.05	□□□□□ -1.92
DOT6	YER088C	YHL012W	P38709	493 aa		3.05	□□□□□ -1.92
DOT6	YER088C	YGL176C	P46945	554 aa		3.05	□□□□□ -1.92
DOT6	YER088C	SSY1	Q03770	852 aa		3.05	□□□□□ -1.92
DOT6	YER088C	BRE4	Q07660	1125 aa		3.05	□□□□□ -1.92
DOT6	YER088C	PEP1	P32319	1579 aa		3.04	□□□□□ -1.92
DOT6	YER088C	GRX1	P25373	110 aa	Known RBP	3.04	□□□□□ -1.92
DOT6	YER088C	SBA1	P28707	216 aa	Known RBP	3.04	□□□□□ -1.92
DOT6	YER088C	MDL2	P33311	773 aa		3.04	□□□□□ -1.92
DOT6	YER088C	VBA5	P36172	582 aa		3.04	□□□□□ -1.92
DOT6	YER088C	MXR1	P40029	184 aa		3.04	□□□□□ -1.92
DOT6	YER088C	SPO20	Q04359	397 aa		3.04	□□□□□ -1.92
DOT6	YER088C	SLA2	P33338	968 aa		3.03	□□□□□ -1.92
DOT6	YER088C	YKL107W	P34251	309 aa		3.03	□□□□□ -1.92
DOT6	YER088C	ABZ1	P37254	787 aa	Predicted RBP	3.03	□□□□□ -1.92
DOT6	YER088C	OCA5	P38738	679 aa		3.03	□□□□□ -1.92
DOT6	YER088C	PFD1	P46988	109 aa		3.03	□□□□□ -1.92
DOT6	YER088C	TNA1	P53322	534 aa		3.03	□□□□□ -1.92
DOT6	YER088C	RSC58	Q07979	502 aa		3.03	□□□□□ -1.92
DOT6	YER088C	GLT1	Q12680	2145 aa	Known RBP	3.03	□□□□□ -1.92
DOT6	YER088C	SBP1	P10080	294 aa	Known RBP	3.03	□□□□□ -1.92
DOT6	YER088C	PRO1	P32264	428 aa		3.03	□□□□□ -1.92
DOT6	YER088C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	3.03	□□□□□ -1.92	not detected
DOT6	YER088C	YKL151C	P36059	337 aa		3.03	□□□□□ -1.92
DOT6	YER088C	PTC7	P38797	343 aa		3.03	□□□□□ -1.92
DOT6	YER088C	MBP1	P39678	833 aa		3.03	□□□□□ -1.92
DOT6	YER088C	OMA1	P36163	345 aa		3.02	□□□□□ -1.93
DOT6	YER088C	PIK1	P39104	1066 aa		3.02	□□□□□ -1.93
DOT6	YER088C	MTC3	P53077	123 aa		3.02	□□□□□ -1.93
DOT6	YER088C	ADP1	P25371	1049 aa		3.02	□□□□□ -1.93
DOT6	YER088C	YHR020W	P38708	688 aa	Known RBP	3.02	□□□□□ -1.93
DOT6	YER088C	GTS1	P40956	396 aa		3.02	□□□□□ -1.93
DOT6	YER088C	IOC3	P43596	787 aa		3.02	□□□□□ -1.93
DOT6	YER088C	TDA5	Q06417	326 aa	Known RBP	3.02	□□□□□ -1.93
DOT6	YER088C	ACM1	Q08981	209 aa		3.02	□□□□□ -1.93
DOT6	YER088C	WRS1	Q12109	432 aa	Known RBP	3.02	□□□□□ -1.93
DOT6	YER088C	RIB2	Q12362	591 aa	Known RBP	3.02	□□□□□ -1.93
DOT6	YER088C	COQ4	O13525	335 aa		3.01	□□□□□ -1.93
DOT6	YER088C	HSP78	P33416	811 aa		3.01	□□□□□ -1.93
DOT6	YER088C	UGA2	P38067	497 aa		3.01	□□□□□ -1.93
DOT6	YER088C	YBR184W	P38299	523 aa		3.01	□□□□□ -1.93
DOT6	YER088C	GEM1	P39722	662 aa		3.01	□□□□□ -1.93
DOT6	YER088C	ATG13	Q06628	738 aa		3.01	□□□□□ -1.93
DOT6	YER088C	BI4	P03879	638 aa		3	□□□□□ -1.93
DOT6	YER088C	LRG1	P35688	1017 aa		3	□□□□□ -1.93
DOT6	YER088C	MRP8	P35719	219 aa		3	□□□□□ -1.93
DOT6	YER088C	CCZ1	P38273	704 aa		3	□□□□□ -1.93
DOT6	YER088C	IRR1	P40541	1150 aa		3	□□□□□ -1.93
DOT6	YER088C	HRQ1	Q05549	1077 aa		3	□□□□□ -1.93
DOT6	YER088C	SPP382	Q06411	708 aa	Predicted RBP	3	□□□□□ -1.93
DOT6	YER088C	YDL177C	Q12257	170 aa		3	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms