RNA–Protein interactions for RNA: YEL051W

VMA8, Transcript of Subunit D of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA8, Length 771 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA8	YEL051W	NBA1	Q08229	501 aa	Known RBP	4.71	□□□□□ -1.66
VMA8	YEL051W	RTT10	Q08924	1013 aa		4.71	□□□□□ -1.66
VMA8	YEL051W	SPO21	Q12411	609 aa		4.71	□□□□□ -1.66
VMA8	YEL051W	RAD27	P26793	382 aa		4.7	□□□□□ -1.66
VMA8	YEL051W	TSA1	P34760	196 aa	Known RBP	4.7	□□□□□ -1.66
VMA8	YEL051W	RGD1	P38339	666 aa		4.7	□□□□□ -1.66
VMA8	YEL051W	ETP1	P38748	585 aa	Known RBP	4.7	□□□□□ -1.66
VMA8	YEL051W	RPN3	P40016	523 aa	Known RBP	4.7	□□□□□ -1.66
VMA8	YEL051W	PRP43	P53131	767 aa	Known RBP	4.7	□□□□□ -1.66
VMA8	YEL051W	YDL177C	Q12257	170 aa		4.7	□□□□□ -1.66
VMA8	YEL051W	DBP5	P20449	482 aa	Known RBP	4.69	□□□□□ -1.66
VMA8	YEL051W	MLS1	P30952	554 aa		4.69	□□□□□ -1.66
VMA8	YEL051W	RER2	P35196	286 aa		4.69	□□□□□ -1.66
VMA8	YEL051W	CCZ1	P38273	704 aa		4.69	□□□□□ -1.66
VMA8	YEL051W	CNN1	P43618	361 aa		4.69	□□□□□ -1.66
VMA8	YEL051W	MRPL22	P53881	309 aa		4.69	□□□□□ -1.66
VMA8	YEL051W	SPS1	P08458	490 aa		4.68	□□□□□ -1.66
VMA8	YEL051W	SNF5	P18480	905 aa		4.68	□□□□□ -1.66
VMA8	YEL051W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
VMA8	YEL051W	PIK1	P39104	1066 aa		4.68	□□□□□ -1.66
VMA8	YEL051W	RSB1	Q08417	382 aa		4.68	□□□□□ -1.66
VMA8	YEL051W	YER152C	P10356	443 aa		4.67	□□□□□ -1.66
VMA8	YEL051W	PET112	P33893	541 aa		4.67	□□□□□ -1.66
VMA8	YEL051W	TIF35	Q04067	274 aa	Known RBP	4.67	□□□□□ -1.66
VMA8	YEL051W	TMA46	Q12000	345 aa	Known RBP	4.67	□□□□□ -1.66
VMA8	YEL051W	DUT1	P33317	147 aa		4.66	□□□□□ -1.66
VMA8	YEL051W	MPH1	P40562	993 aa		4.66	□□□□□ -1.66
VMA8	YEL051W	SEC26	P41810	973 aa	Known RBP	4.66	□□□□□ -1.66
VMA8	YEL051W	YFL054C	P43549	646 aa		4.66	□□□□□ -1.66
VMA8	YEL051W	CDC34	P14682	295 aa		4.65	□□□□□ -1.67
VMA8	YEL051W	THI80	P35202	319 aa		4.65	□□□□□ -1.67
VMA8	YEL051W	MNR2	P35724	969 aa		4.65	□□□□□ -1.67
VMA8	YEL051W	AIM3	P38266	947 aa	Known RBP	4.65	□□□□□ -1.67
VMA8	YEL051W	ENV11	P53246	860 aa		4.65	□□□□□ -1.67
VMA8	YEL051W	SNO2	P53823	222 aa		4.65	□□□□□ -1.67
VMA8	YEL051W	PRP6	P19735	899 aa	Predicted RBP	4.64	□□□□□ -1.67
VMA8	YEL051W	ABZ1	P37254	787 aa	Predicted RBP	4.64	□□□□□ -1.67
VMA8	YEL051W	MCM7	P38132	845 aa		4.64	□□□□□ -1.67
VMA8	YEL051W	HNT2	P49775	206 aa		4.64	□□□□□ -1.67
VMA8	YEL051W	LYP1	P32487	611 aa		4.63	□□□□□ -1.67
VMA8	YEL051W	MET10	P39692	1035 aa		4.63	□□□□□ -1.67
VMA8	YEL051W	EEB1	Q02891	456 aa		4.63	□□□□□ -1.67
VMA8	YEL051W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
VMA8	YEL051W	TRP2	P00899	507 aa	Known RBP	4.62	□□□□□ -1.67
VMA8	YEL051W	TYW3	P53177	273 aa		4.62	□□□□□ -1.67
VMA8	YEL051W	RIM8	P53179	542 aa		4.62	□□□□□ -1.67
VMA8	YEL051W	YPL277C	Q08989	487 aa		4.62	□□□□□ -1.67
VMA8	YEL051W	GNT1	Q12096	491 aa		4.62	□□□□□ -1.67
VMA8	YEL051W	SOD2	P00447	233 aa		4.61	□□□□□ -1.67
VMA8	YEL051W	BAS1	P22035	811 aa		4.61	□□□□□ -1.67
VMA8	YEL051W	DBP2	P24783	546 aa	Known RBP	4.61	□□□□□ -1.67
VMA8	YEL051W	RFC5	P38251	354 aa		4.61	□□□□□ -1.67
VMA8	YEL051W	MXR1	P40029	184 aa		4.61	□□□□□ -1.67
VMA8	YEL051W	YOR352W	Q08816	343 aa		4.61	□□□□□ -1.67
VMA8	YEL051W	CYC1	P00044	109 aa	Predicted RBP	4.6	□□□□□ -1.67
VMA8	YEL051W	RPS13	P05756	151 aa	Known RBP	4.6	□□□□□ -1.67
VMA8	YEL051W	RPL11A	P0C0W9	174 aa	Known RBP	4.6	□□□□□ -1.67
VMA8	YEL051W	INO1	P11986	533 aa		4.6	□□□□□ -1.67
VMA8	YEL051W	MOT2	P34909	587 aa	Known RBP	4.6	□□□□□ -1.67
VMA8	YEL051W	LAM1	P38851	1228 aa		4.6	□□□□□ -1.67
VMA8	YEL051W	YGR053C	P53234	283 aa		4.6	□□□□□ -1.67
VMA8	YEL051W	RSM24	Q03976	319 aa		4.6	□□□□□ -1.67
VMA8	YEL051W	SGD1	Q06132	899 aa		4.6	□□□□□ -1.67
VMA8	YEL051W	ESC8	Q08119	714 aa		4.6	□□□□□ -1.67
VMA8	YEL051W	SVS1	Q12254	260 aa		4.6	□□□□□ -1.67
VMA8	YEL051W	RPL11B	Q3E757	174 aa	Predicted RBP	4.6	□□□□□ -1.67
VMA8	YEL051W	TOD6	P34219	525 aa		4.59	□□□□□ -1.67
VMA8	YEL051W	PNT1	P38969	423 aa		4.59	□□□□□ -1.67
VMA8	YEL051W	MEF2	P39677	819 aa		4.59	□□□□□ -1.67
VMA8	YEL051W	GEM1	P39722	662 aa		4.59	□□□□□ -1.67
VMA8	YEL051W	SNU71	P53207	620 aa	Known RBP	4.59	□□□□□ -1.67
VMA8	YEL051W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
VMA8	YEL051W	ATG13	Q06628	738 aa		4.59	□□□□□ -1.67
VMA8	YEL051W	ACM1	Q08981	209 aa		4.59	□□□□□ -1.67
VMA8	YEL051W	UGA2	P38067	497 aa		4.58	□□□□□ -1.68
VMA8	YEL051W	TAF1	P46677	1066 aa		4.58	□□□□□ -1.68
VMA8	YEL051W	YGL176C	P46945	554 aa		4.58	□□□□□ -1.68
VMA8	YEL051W	FAA4	P47912	694 aa	Known RBP	4.58	□□□□□ -1.68
VMA8	YEL051W	SPO20	Q04359	397 aa		4.58	□□□□□ -1.68
VMA8	YEL051W	SPP382	Q06411	708 aa	Predicted RBP	4.58	□□□□□ -1.68
VMA8	YEL051W	YPL066W	Q12194	479 aa		4.58	□□□□□ -1.68
VMA8	YEL051W	RKM4	Q12504	494 aa		4.58	□□□□□ -1.68
VMA8	YEL051W	KIN2	P13186	1147 aa	Known RBP	4.57	□□□□□ -1.68
VMA8	YEL051W	CMP2	P14747	604 aa		4.57	□□□□□ -1.68
VMA8	YEL051W	CLN2	P20438	545 aa		4.57	□□□□□ -1.68
VMA8	YEL051W	SRM1	P21827	482 aa		4.57	□□□□□ -1.68
VMA8	YEL051W	YCR015C	P25616	317 aa		4.57	□□□□□ -1.68
VMA8	YEL051W	APL1	P27351	700 aa		4.57	□□□□□ -1.68
VMA8	YEL051W	SLA2	P33338	968 aa		4.57	□□□□□ -1.68
VMA8	YEL051W	FLR1	P38124	548 aa		4.57	□□□□□ -1.68
VMA8	YEL051W	NOP7	P53261	605 aa	Known RBP	4.57	□□□□□ -1.68
VMA8	YEL051W	GDE1	Q02979	1223 aa		4.57	□□□□□ -1.68
VMA8	YEL051W	PLB2	Q03674	706 aa		4.57	□□□□□ -1.68
VMA8	YEL051W	ROT1	Q03691	256 aa		4.57	□□□□□ -1.68
VMA8	YEL051W	YDR132C	Q03900	495 aa		4.57	□□□□□ -1.68
VMA8	YEL051W	SVF1	Q05515	481 aa		4.57	□□□□□ -1.68
VMA8	YEL051W	YLR225C	Q05948	407 aa	Known RBP	4.57	□□□□□ -1.68
VMA8	YEL051W	BI4	P03879	638 aa		4.56	□□□□□ -1.68
VMA8	YEL051W	GAL10	P04397	699 aa		4.56	□□□□□ -1.68
VMA8	YEL051W	NAP1	P25293	417 aa	Known RBP	4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms