RNA–Protein interactions for RNA: YDR488C

PAC11, Transcript of Dynein intermediate chain, microtubule motor protein, yeastyeast

Gene PAC11, Length 1,602 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAC11YDR488C SGM1P47166 707 aa12.75□□□□□ -0.37
PAC11YDR488C NOP15P53927 220 aaPredicted RBP12.75□□□□□ -0.37
PAC11YDR488C CEF1Q03654 590 aaPredicted RBP12.75□□□□□ -0.37
PAC11YDR488C ELG1Q12050 791 aa12.75□□□□□ -0.37
PAC11YDR488C HTZ1Q12692 134 aaKnown RBP12.75□□□□□ -0.37
PAC11YDR488C PDC1P06169 563 aaKnown RBP12.74□□□□□ -0.37
PAC11YDR488C PET494P07390 489 aaPredicted RBP12.74□□□□□ -0.37
PAC11YDR488C SEC23P15303 768 aaKnown RBP12.74□□□□□ -0.37
PAC11YDR488C IMD4P50094 524 aaKnown RBP12.74□□□□□ -0.37
PAC11YDR488C RSM28Q03430 361 aa12.74□□□□□ -0.37
PAC11YDR488C SXM1Q04175 944 aaKnown RBP12.74□□□□□ -0.37
PAC11YDR488C CDC8P00572 216 aa12.73□□□□□ -0.37
PAC11YDR488C CBF2P32504 956 aa12.73□□□□□ -0.37
PAC11YDR488C RPC34P32910 317 aa12.73□□□□□ -0.37
PAC11YDR488C SQT1P35184 431 aa12.73□□□□□ -0.37
PAC11YDR488C FZO1P38297 855 aa12.73□□□□□ -0.37
PAC11YDR488C YEL023CP39992 682 aa12.73□□□□□ -0.37
PAC11YDR488C SQS1P53866 767 aaKnown RBP12.73□□□□□ -0.37
PAC11YDR488C ESBP6P53918 673 aa12.73□□□□□ -0.37
PAC11YDR488C PKH1Q03407 766 aa12.73□□□□□ -0.37
PAC11YDR488C BDF2Q07442 638 aa12.73□□□□□ -0.37
PAC11YDR488C RPS19AP07280 144 aaKnown RBP12.73□□□□□ -0.37
PAC11YDR488C RPS19BP07281 144 aaPredicted RBP12.73□□□□□ -0.37
PAC11YDR488C SCJ1P25303 377 aa12.73□□□□□ -0.37
PAC11YDR488C MAL33P38157 468 aa12.73□□□□□ -0.37
PAC11YDR488C BRL1P38770 471 aa12.73□□□□□ -0.37
PAC11YDR488C UTP22P53254 1237 aaPredicted RBP12.73□□□□□ -0.37
PAC11YDR488C ZPR1P53303 486 aaKnown RBP12.73□□□□□ -0.37
PAC11YDR488C UFD2P54860 961 aa12.73□□□□□ -0.37
PAC11YDR488C CIK1Q01649 594 aa12.73□□□□□ -0.37
PAC11YDR488C RIX7Q07844 837 aaKnown RBP12.73□□□□□ -0.37
PAC11YDR488C GPN2Q08726 347 aaPredicted RBP12.73□□□□□ -0.37
PAC11YDR488C REP1P03871 373 aa12.72□□□□□ -0.37
PAC11YDR488C RPL17AP05740 184 aaKnown RBP12.72□□□□□ -0.37
PAC11YDR488C SEC15P22224 910 aa12.72□□□□□ -0.37
PAC11YDR488C VPH2P32341 215 aa12.72□□□□□ -0.37
PAC11YDR488C YKT6P36015 200 aaKnown RBP12.72□□□□□ -0.37
PAC11YDR488C HEK2P38199 381 aaKnown RBP RIP-Chip data12.72□□□□□ -0.37 RIP-Chip
PAC11YDR488C FES1P38260 290 aa12.72□□□□□ -0.37
PAC11YDR488C SMF1P38925 575 aa12.72□□□□□ -0.37
PAC11YDR488C TEL2P53038 688 aa12.72□□□□□ -0.37
PAC11YDR488C HOP2P53187 214 aa12.72□□□□□ -0.37
PAC11YDR488C NOB1Q08444 459 aaKnown RBP12.72□□□□□ -0.37
PAC11YDR488C HCA4P20448 770 aaKnown RBP12.71□□□□□ -0.37
PAC11YDR488C SEC8P32855 1065 aa12.71□□□□□ -0.37
PAC11YDR488C YKL091CP33324 310 aaKnown RBP12.71□□□□□ -0.37
PAC11YDR488C MCX1P38323 520 aaPredicted RBP12.71□□□□□ -0.37
PAC11YDR488C YBR242WP38331 238 aa12.71□□□□□ -0.37
PAC11YDR488C SDS3P40505 327 aa12.71□□□□□ -0.37
PAC11YDR488C ECL1P48235 211 aa12.71□□□□□ -0.37
PAC11YDR488C RMD1Q03441 430 aa12.71□□□□□ -0.37
PAC11YDR488C RSM24Q03976 319 aa12.71□□□□□ -0.37
PAC11YDR488C YLR257WQ06146 321 aaKnown RBP12.71□□□□□ -0.37
PAC11YDR488C VIK1Q12045 647 aa12.71□□□□□ -0.37
PAC11YDR488C SSC1P0CS90 654 aaKnown RBP12.7□□□□□ -0.38
PAC11YDR488C NPL4P33755 580 aa12.7□□□□□ -0.38
PAC11YDR488C COY1P34237 679 aa12.7□□□□□ -0.38
PAC11YDR488C YHB1P39676 399 aaKnown RBP12.7□□□□□ -0.38
PAC11YDR488C LAM5P43560 674 aa12.7□□□□□ -0.38
PAC11YDR488C HOS2P53096 452 aaPredicted RBP12.7□□□□□ -0.38
PAC11YDR488C SPO71Q03868 1245 aa12.7□□□□□ -0.38
PAC11YDR488C PPM1Q04081 328 aa12.7□□□□□ -0.38
PAC11YDR488C PSK2Q08217 1101 aa12.7□□□□□ -0.38
PAC11YDR488C SCM3Q12334 223 aa12.7□□□□□ -0.38
PAC11YDR488C PRP4P20053 465 aaKnown RBP12.7□□□□□ -0.38
PAC11YDR488C VPS1P21576 704 aaKnown RBP12.7□□□□□ -0.38
PAC11YDR488C GGA2P38817 585 aaKnown RBP12.7□□□□□ -0.38
PAC11YDR488C POL31P46957 487 aa12.7□□□□□ -0.38
PAC11YDR488C RAT1Q02792 1006 aaKnown RBP12.7□□□□□ -0.38
PAC11YDR488C YIG1Q08956 461 aa12.7□□□□□ -0.38
PAC11YDR488C HMG1P12683 1054 aa12.69□□□□□ -0.38
PAC11YDR488C RSR1P13856 272 aa12.69□□□□□ -0.38
PAC11YDR488C BOI1P38041 980 aaKnown RBP12.69□□□□□ -0.38
PAC11YDR488C RFT1P38206 574 aaPredicted RBP12.69□□□□□ -0.38
PAC11YDR488C SIP3P38717 1229 aa12.69□□□□□ -0.38
PAC11YDR488C STB2P46679 850 aa12.69□□□□□ -0.38
PAC11YDR488C MUB1Q03162 620 aa12.69□□□□□ -0.38
PAC11YDR488C GIR2Q03768 265 aaPredicted RBP12.69□□□□□ -0.38
PAC11YDR488C TAP42Q04372 366 aa12.69□□□□□ -0.38
PAC11YDR488C HIS3P06633 220 aa12.68□□□□□ -0.38
PAC11YDR488C NIP1P32497 812 aaKnown RBP12.68□□□□□ -0.38
PAC11YDR488C STE13P33894 931 aa12.68□□□□□ -0.38
PAC11YDR488C ATG17Q06410 417 aa12.68□□□□□ -0.38
PAC11YDR488C TFB4Q12004 338 aa12.68□□□□□ -0.38
PAC11YDR488C TAF10Q12030 206 aa12.68□□□□□ -0.38
PAC11YDR488C BUD23P25627 275 aaPredicted RBP12.67□□□□□ -0.38
PAC11YDR488C YGR266WP53326 701 aa12.67□□□□□ -0.38
PAC11YDR488C ENO2P00925 437 aaKnown RBP12.66□□□□□ -0.38
PAC11YDR488C RPB2P08518 1224 aaKnown RBP12.66□□□□□ -0.38
PAC11YDR488C LPD1P09624 499 aaKnown RBP12.66□□□□□ -0.38
PAC11YDR488C OCT1P35999 772 aa12.66□□□□□ -0.38
PAC11YDR488C AAP1P37898 856 aaKnown RBP12.66□□□□□ -0.38
PAC11YDR488C SPO22P40511 975 aa12.66□□□□□ -0.38
PAC11YDR488C VPS16Q03308 798 aa12.66□□□□□ -0.38
PAC11YDR488C DCS2Q12123 353 aa12.66□□□□□ -0.38
PAC11YDR488C CDC31P06704 161 aaKnown RBP12.66□□□□□ -0.38
PAC11YDR488C SBP1P10080 294 aaKnown RBP12.66□□□□□ -0.38
PAC11YDR488C GCD7P32502 381 aaPredicted RBP12.66□□□□□ -0.38
PAC11YDR488C MPT5P39016 859 aaKnown RBP RIP-Chip data12.66□□□□□ -0.38not detected
PAC11YDR488C ENT3P47160 408 aa12.66□□□□□ -0.38
Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms