RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W SPC105P53148 917 aa3.71□□□□□ -1.82
SIZ1YDR409W CDC73Q06697 393 aa3.71□□□□□ -1.82
SIZ1YDR409W WRS1Q12109 432 aaKnown RBP3.71□□□□□ -1.82
SIZ1YDR409W RTP1Q12751 981 aa3.71□□□□□ -1.82
SIZ1YDR409W DDP1Q99321 188 aaKnown RBP3.71□□□□□ -1.82
SIZ1YDR409W ADE6P38972 1358 aaKnown RBP3.71□□□□□ -1.82
SIZ1YDR409W CYT1P07143 309 aa3.7□□□□□ -1.82
SIZ1YDR409W SES1P07284 462 aaKnown RBP3.7□□□□□ -1.82
SIZ1YDR409W KCC4P25389 1037 aa3.7□□□□□ -1.82
SIZ1YDR409W RPL8BP29453 256 aaKnown RBP3.7□□□□□ -1.82
SIZ1YDR409W PRX1P34227 261 aaKnown RBP3.7□□□□□ -1.82
SIZ1YDR409W NDE1P40215 560 aa3.7□□□□□ -1.82
SIZ1YDR409W MEP1P40260 492 aa3.7□□□□□ -1.82
SIZ1YDR409W BUB1P41695 1021 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
SIZ1YDR409W RSC8P43609 557 aaKnown RBP3.7□□□□□ -1.82
SIZ1YDR409W UPF3P48412 387 aaKnown RBP3.7□□□□□ -1.82
SIZ1YDR409W ENV11P53246 860 aa3.7□□□□□ -1.82
SIZ1YDR409W UBX4P54730 416 aa3.7□□□□□ -1.82
SIZ1YDR409W CTF4Q01454 927 aa3.7□□□□□ -1.82
SIZ1YDR409W UTP14Q04500 899 aaKnown RBP3.7□□□□□ -1.82
SIZ1YDR409W PUN1Q06991 263 aa3.7□□□□□ -1.82
SIZ1YDR409W TSC13Q99190 310 aa3.7□□□□□ -1.82
SIZ1YDR409W SST2P11972 698 aaKnown RBP3.7□□□□□ -1.82
SIZ1YDR409W VPS41P38959 992 aa3.7□□□□□ -1.82
SIZ1YDR409W DSN1P40568 576 aa3.7□□□□□ -1.82
SIZ1YDR409W PIP2P52960 996 aa3.7□□□□□ -1.82
SIZ1YDR409W YGL140CP53120 1219 aa3.7□□□□□ -1.82
SIZ1YDR409W NPY1P53164 384 aa3.7□□□□□ -1.82
SIZ1YDR409W TRS33Q99394 268 aa3.7□□□□□ -1.82
SIZ1YDR409W COQ4O13525 335 aa3.69□□□□□ -1.82
SIZ1YDR409W FUR4P05316 633 aaKnown RBP3.69□□□□□ -1.82
SIZ1YDR409W MSS18P08593 268 aa3.69□□□□□ -1.82
SIZ1YDR409W STE11P23561 717 aa3.69□□□□□ -1.82
SIZ1YDR409W PEX6P33760 1030 aa3.69□□□□□ -1.82
SIZ1YDR409W AAP1P37898 856 aaKnown RBP3.69□□□□□ -1.82
SIZ1YDR409W HSE1P38753 452 aa3.69□□□□□ -1.82
SIZ1YDR409W RSC4Q02206 625 aa3.69□□□□□ -1.82
SIZ1YDR409W TFC6Q06339 672 aa3.69□□□□□ -1.82
SIZ1YDR409W BRE4Q07660 1125 aa3.69□□□□□ -1.82
SIZ1YDR409W GAS4Q08271 471 aa3.69□□□□□ -1.82
SIZ1YDR409W YDR056CQ12025 205 aa3.69□□□□□ -1.82
SIZ1YDR409W YLR125WQ12138 136 aa3.69□□□□□ -1.82
SIZ1YDR409W YPL150WQ12152 901 aa3.69□□□□□ -1.82
SIZ1YDR409W MSB4Q12317 492 aa3.69□□□□□ -1.82
SIZ1YDR409W AI4P03878 556 aa3.69□□□□□ -1.82
SIZ1YDR409W SEC2P17065 759 aa3.69□□□□□ -1.82
SIZ1YDR409W NOP4P37838 685 aaKnown RBP3.69□□□□□ -1.82
SIZ1YDR409W YBR184WP38299 523 aa3.69□□□□□ -1.82
SIZ1YDR409W SIC1P38634 284 aa3.69□□□□□ -1.82
SIZ1YDR409W RTT107P38850 1070 aa3.69□□□□□ -1.82
SIZ1YDR409W GPP2P40106 250 aaKnown RBP3.69□□□□□ -1.82
SIZ1YDR409W YAP1802P53309 568 aa3.69□□□□□ -1.82
SIZ1YDR409W FOX2Q02207 900 aaKnown RBP3.69□□□□□ -1.82
SIZ1YDR409W YMR102CQ03177 834 aa3.69□□□□□ -1.82
SIZ1YDR409W VIP1Q06685 1146 aaKnown RBP3.69□□□□□ -1.82
SIZ1YDR409W YKL068W-AQ3E826 78 aa3.69□□□□□ -1.82
SIZ1YDR409W SLY41P22215 453 aa3.68□□□□□ -1.82
SIZ1YDR409W IMP2'P32351 346 aa3.68□□□□□ -1.82
SIZ1YDR409W NGR1P32831 672 aaKnown RBP3.68□□□□□ -1.82
SIZ1YDR409W HSP78P33416 811 aa3.68□□□□□ -1.82
SIZ1YDR409W PET112P33893 541 aa3.68□□□□□ -1.82
SIZ1YDR409W MAD1P40957 749 aa3.68□□□□□ -1.82
SIZ1YDR409W TAF1P46677 1066 aa3.68□□□□□ -1.82
SIZ1YDR409W CTH1P47976 325 aa3.68□□□□□ -1.82
SIZ1YDR409W CDC55Q00362 526 aa3.68□□□□□ -1.82
SIZ1YDR409W MET14Q02196 202 aa3.68□□□□□ -1.82
SIZ1YDR409W YML131WQ03102 365 aa3.68□□□□□ -1.82
SIZ1YDR409W RIM20Q12033 661 aa3.68□□□□□ -1.82
SIZ1YDR409W GRE2Q12068 342 aaKnown RBP3.68□□□□□ -1.82
SIZ1YDR409W TY4B-HP0C2J7 1802 aa3.68□□□□□ -1.82
SIZ1YDR409W TY4B-JP47024 1803 aa3.68□□□□□ -1.82
SIZ1YDR409W TY1A-DR4O74302 440 aa3.68□□□□□ -1.82
SIZ1YDR409W GCR1P07261 785 aa3.68□□□□□ -1.82
SIZ1YDR409W TY1A-HP0C2I4 478 aaKnown RBP3.68□□□□□ -1.82
SIZ1YDR409W RPS24AP0CX31 135 aaKnown RBP3.68□□□□□ -1.82
SIZ1YDR409W RPS24BP0CX32 135 aaKnown RBP3.68□□□□□ -1.82
SIZ1YDR409W TY1A-AP0CX57 440 aa3.68□□□□□ -1.82
SIZ1YDR409W TY1A-PR1P0CX58 440 aa3.68□□□□□ -1.82
SIZ1YDR409W TY1A-ORP0CX59 440 aa3.68□□□□□ -1.82
SIZ1YDR409W TY1A-PR2P0CX60 440 aa3.68□□□□□ -1.82
SIZ1YDR409W TY1A-DR5P0CX65 440 aa3.68□□□□□ -1.82
SIZ1YDR409W TY1A-ER2P0CX66 440 aa3.68□□□□□ -1.82
SIZ1YDR409W TY1A-GR3P0CX67 440 aa3.68□□□□□ -1.82
SIZ1YDR409W TY1A-LR1P0CX68 440 aa3.68□□□□□ -1.82
SIZ1YDR409W TY1A-MR2P0CX69 440 aa3.68□□□□□ -1.82
SIZ1YDR409W MRPL32P25348 183 aa3.68□□□□□ -1.82
SIZ1YDR409W BYE1P36106 594 aa3.68□□□□□ -1.82
SIZ1YDR409W YBR287WP38355 427 aa3.68□□□□□ -1.82
SIZ1YDR409W PEA2P40091 420 aa3.68□□□□□ -1.82
SIZ1YDR409W NIT1P40447 199 aa3.68□□□□□ -1.82
SIZ1YDR409W TY1A-JR2P47099 440 aa3.68□□□□□ -1.82
SIZ1YDR409W STR2P47164 639 aa3.68□□□□□ -1.82
SIZ1YDR409W PRP31P49704 494 aaPredicted RBP3.68□□□□□ -1.82
SIZ1YDR409W PEX14P53112 341 aa3.68□□□□□ -1.82
SIZ1YDR409W NUT1P53114 1132 aa3.68□□□□□ -1.82
SIZ1YDR409W TIM11P81449 96 aaPredicted RBP3.68□□□□□ -1.82
SIZ1YDR409W HOT1Q03213 719 aa3.68□□□□□ -1.82
SIZ1YDR409W TY1A-DR1Q03856 440 aa3.68□□□□□ -1.82
SIZ1YDR409W YMR196WQ04336 1088 aa3.68□□□□□ -1.82
SIZ1YDR409W TY1A-ML1Q04706 440 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms