RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeastyeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE9YDR393W HNT2P49775 206 aa6.25□□□□□ -1.41
SHE9YDR393W THI13Q07748 340 aa6.25□□□□□ -1.41
SHE9YDR393W ROT1Q03691 256 aa6.24□□□□□ -1.41
SHE9YDR393W RSB1Q08417 382 aa6.24□□□□□ -1.41
SHE9YDR393W YPL260WQ08977 551 aa6.24□□□□□ -1.41
SHE9YDR393W TUB2P02557 457 aaKnown RBP6.23□□□□□ -1.41
SHE9YDR393W TAF13P11747 167 aa6.23□□□□□ -1.41
SHE9YDR393W MPT5P39016 859 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41 RIP-Chip
SHE9YDR393W RAT1Q02792 1006 aaKnown RBP6.23□□□□□ -1.41
SHE9YDR393W PLB2Q03674 706 aa6.23□□□□□ -1.41
SHE9YDR393W ROD1Q02805 837 aa6.22□□□□□ -1.41
SHE9YDR393W DUS4Q06063 367 aa6.22□□□□□ -1.41
SHE9YDR393W YFL054CP43549 646 aa6.21□□□□□ -1.41
SHE9YDR393W PUF4P25339 888 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
SHE9YDR393W GIS1Q03833 894 aa6.2□□□□□ -1.42
SHE9YDR393W SRM1P21827 482 aa6.19□□□□□ -1.42
SHE9YDR393W DOM34P33309 386 aa6.19□□□□□ -1.42
SHE9YDR393W YGR122WP53272 402 aa6.19□□□□□ -1.42
SHE9YDR393W RIB2Q12362 591 aaKnown RBP6.19□□□□□ -1.42
SHE9YDR393W GAL10P04397 699 aa6.18□□□□□ -1.42
SHE9YDR393W PRE9P23638 258 aaKnown RBP6.18□□□□□ -1.42
SHE9YDR393W MKK2P32491 506 aa6.18□□□□□ -1.42
SHE9YDR393W SIW14P53965 281 aa6.18□□□□□ -1.42
SHE9YDR393W MCD1Q12158 566 aa6.18□□□□□ -1.42
SHE9YDR393W CMP2P14747 604 aa6.18□□□□□ -1.42
SHE9YDR393W HXT13P39924 564 aa6.18□□□□□ -1.42
SHE9YDR393W HXT17P53631 564 aa6.18□□□□□ -1.42
SHE9YDR393W HXT15P54854 567 aa6.18□□□□□ -1.42
SHE9YDR393W RSM24Q03976 319 aa6.18□□□□□ -1.42
SHE9YDR393W SEC20P28791 383 aa6.17□□□□□ -1.42
SHE9YDR393W RFC5P38251 354 aa6.17□□□□□ -1.42
SHE9YDR393W IPL1P38991 367 aa6.17□□□□□ -1.42
SHE9YDR393W GNP1P48813 663 aa6.17□□□□□ -1.42
SHE9YDR393W PNS1Q12412 539 aa6.17□□□□□ -1.42
SHE9YDR393W CDC6P09119 513 aa6.16□□□□□ -1.42
SHE9YDR393W CDC20P26309 610 aa6.16□□□□□ -1.42
SHE9YDR393W MRPS18P42847 217 aa6.16□□□□□ -1.42
SHE9YDR393W ENT3P47160 408 aa6.16□□□□□ -1.42
SHE9YDR393W YER152CP10356 443 aa6.15□□□□□ -1.43
SHE9YDR393W RGD1P38339 666 aa6.15□□□□□ -1.43
SHE9YDR393W RXT3Q07458 294 aa6.14□□□□□ -1.43
SHE9YDR393W ACK1Q07622 623 aaPredicted RBP6.14□□□□□ -1.43
SHE9YDR393W RAD2P07276 1031 aa6.13□□□□□ -1.43
SHE9YDR393W SEC8P32855 1065 aa6.13□□□□□ -1.43
SHE9YDR393W TRM2P33753 639 aa6.13□□□□□ -1.43
SHE9YDR393W LST4P34239 828 aa6.13□□□□□ -1.43
SHE9YDR393W GPB1Q08886 897 aa6.13□□□□□ -1.43
SHE9YDR393W CYC8P14922 966 aa6.12□□□□□ -1.43
SHE9YDR393W MLS1P30952 554 aa6.12□□□□□ -1.43
SHE9YDR393W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
SHE9YDR393W TMA10Q06177 86 aa6.12□□□□□ -1.43
SHE9YDR393W PUS9Q12069 462 aa6.12□□□□□ -1.43
SHE9YDR393W SVS1Q12254 260 aa6.12□□□□□ -1.43
SHE9YDR393W STE11P23561 717 aa6.11□□□□□ -1.43
SHE9YDR393W SYP1P25623 870 aaKnown RBP6.11□□□□□ -1.43
SHE9YDR393W SIZ1Q04195 904 aa6.11□□□□□ -1.43
SHE9YDR393W MRL1Q06815 381 aa6.11□□□□□ -1.43
SHE9YDR393W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
SHE9YDR393W KIN2P13186 1147 aaKnown RBP6.1□□□□□ -1.43
SHE9YDR393W CNN1P43618 361 aa6.1□□□□□ -1.43
SHE9YDR393W SEN54Q02825 467 aaPredicted RBP6.1□□□□□ -1.43
SHE9YDR393W DBP5P20449 482 aaKnown RBP6.09□□□□□ -1.43
SHE9YDR393W HCM1P25364 564 aa6.09□□□□□ -1.43
SHE9YDR393W APL1P27351 700 aa6.09□□□□□ -1.43
SHE9YDR393W RPS26AP39938 119 aaKnown RBP6.09□□□□□ -1.43
SHE9YDR393W RPS26BP39939 119 aaKnown RBP6.09□□□□□ -1.43
SHE9YDR393W MSE1P48525 536 aa6.09□□□□□ -1.43
SHE9YDR393W MNN10P50108 393 aaKnown RBP6.09□□□□□ -1.43
SHE9YDR393W MCM6P53091 1017 aaKnown RBP6.09□□□□□ -1.43
SHE9YDR393W VPS62P53285 467 aa6.09□□□□□ -1.43
SHE9YDR393W PBP1P53297 722 aaKnown RBP6.09□□□□□ -1.43
SHE9YDR393W SLI1P53304 468 aa6.09□□□□□ -1.43
SHE9YDR393W YAP6Q03935 383 aa6.09□□□□□ -1.43
SHE9YDR393W ATG13Q06628 738 aa6.09□□□□□ -1.43
SHE9YDR393W TAD3Q9URQ3 322 aa6.09□□□□□ -1.43
SHE9YDR393W GCR1P07261 785 aa6.08□□□□□ -1.44
SHE9YDR393W MPH1P40562 993 aa6.08□□□□□ -1.44
SHE9YDR393W GTF1P53260 183 aaPredicted RBP6.07□□□□□ -1.44
SHE9YDR393W BAS1P22035 811 aa6.06□□□□□ -1.44
SHE9YDR393W HMI1Q12039 706 aa6.06□□□□□ -1.44
SHE9YDR393W NTO1Q12311 748 aa6.06□□□□□ -1.44
SHE9YDR393W SUN4P53616 420 aa6.06□□□□□ -1.44
SHE9YDR393W MSC2Q03455 724 aa6.06□□□□□ -1.44
SHE9YDR393W YLR224WQ05947 369 aa6.06□□□□□ -1.44
SHE9YDR393W EMC1P25574 760 aa6.05□□□□□ -1.44
SHE9YDR393W MCM2P29469 868 aa6.05□□□□□ -1.44
SHE9YDR393W GCV2P49095 1034 aa6.05□□□□□ -1.44
SHE9YDR393W ACE2P21192 770 aa6.04□□□□□ -1.44
SHE9YDR393W MXR1P40029 184 aa6.04□□□□□ -1.44
SHE9YDR393W PHO23P50947 330 aa6.04□□□□□ -1.44
SHE9YDR393W PMI40P29952 429 aaKnown RBP6.03□□□□□ -1.44
SHE9YDR393W UGA2P38067 497 aa6.03□□□□□ -1.44
SHE9YDR393W RER2P35196 286 aa6.02□□□□□ -1.45
SHE9YDR393W TIF35Q04067 274 aaKnown RBP6.02□□□□□ -1.45
SHE9YDR393W SPR28Q04921 423 aa6.02□□□□□ -1.45
SHE9YDR393W BI4P03879 638 aa6.01□□□□□ -1.45
SHE9YDR393W PMA1P05030 918 aaKnown RBP6.01□□□□□ -1.45
SHE9YDR393W RPL11AP0C0W9 174 aaKnown RBP6.01□□□□□ -1.45
SHE9YDR393W AIM21P40563 679 aa6.01□□□□□ -1.45
SHE9YDR393W NOP12Q08208 459 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms