RNA–Protein interactions for RNA: YDR246W

TRS23, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeastyeast

Gene TRS23, Length 660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS23YDR246W ALG6Q12001 544 aaKnown RBP6.46□□□□□ -1.38
TRS23YDR246W GPT2P36148 743 aa6.45□□□□□ -1.38
TRS23YDR246W EXO5P38289 585 aa6.45□□□□□ -1.38
TRS23YDR246W PEX13P80667 386 aa6.45□□□□□ -1.38
TRS23YDR246W NOG1Q02892 647 aaKnown RBP6.45□□□□□ -1.38
TRS23YDR246W GIC2Q06648 383 aa6.45□□□□□ -1.38
TRS23YDR246W SPE2P21182 396 aa6.44□□□□□ -1.38
TRS23YDR246W ARL1P38116 183 aaKnown RBP6.44□□□□□ -1.38
TRS23YDR246W YAP3P38749 330 aa6.44□□□□□ -1.38
TRS23YDR246W BCK1Q01389 1478 aa6.44□□□□□ -1.38
TRS23YDR246W RAD9P14737 1309 aa6.44□□□□□ -1.38
TRS23YDR246W HXK1P04806 485 aaKnown RBP6.43□□□□□ -1.38
TRS23YDR246W MSH3P25336 1018 aa6.43□□□□□ -1.38
TRS23YDR246W ALO1P54783 526 aaKnown RBP6.43□□□□□ -1.38
TRS23YDR246W YPL109CQ02981 657 aa6.43□□□□□ -1.38
TRS23YDR246W ATE1P16639 503 aa6.42□□□□□ -1.38
TRS23YDR246W ASF1P32447 279 aa6.42□□□□□ -1.38
TRS23YDR246W NEM1P38757 446 aa6.42□□□□□ -1.38
TRS23YDR246W SLS1P42900 643 aa6.42□□□□□ -1.38
TRS23YDR246W MTR4P47047 1073 aaKnown RBP6.42□□□□□ -1.38
TRS23YDR246W YGR130CP53278 816 aa6.42□□□□□ -1.38
TRS23YDR246W ADI1Q03677 179 aa6.42□□□□□ -1.38
TRS23YDR246W AVO1Q08236 1176 aa6.42□□□□□ -1.38
TRS23YDR246W PEX28P38848 579 aa6.41□□□□□ -1.38
TRS23YDR246W YGR122WP53272 402 aa6.41□□□□□ -1.38
TRS23YDR246W TAF8Q03750 510 aa6.41□□□□□ -1.38
TRS23YDR246W URN1Q06525 465 aaKnown RBP6.41□□□□□ -1.38
TRS23YDR246W MED7Q08278 222 aa6.41□□□□□ -1.38
TRS23YDR246W TRP3P00937 484 aa6.4□□□□□ -1.38
TRS23YDR246W MAC1P35192 417 aa6.4□□□□□ -1.38
TRS23YDR246W YGR045CP53229 120 aa6.4□□□□□ -1.38
TRS23YDR246W ELA1P53861 379 aaPredicted RBP6.4□□□□□ -1.38
TRS23YDR246W RRP15Q06511 250 aaPredicted RBP6.4□□□□□ -1.38
TRS23YDR246W MSB1P21339 1137 aaKnown RBP6.39□□□□□ -1.39
TRS23YDR246W YKR073CP36153 106 aa6.39□□□□□ -1.39
TRS23YDR246W OMA1P36163 345 aa6.39□□□□□ -1.39
TRS23YDR246W ATG14P38270 344 aa6.39□□□□□ -1.39
TRS23YDR246W MSH4P40965 878 aaPredicted RBP6.39□□□□□ -1.39
TRS23YDR246W MMM1P41800 426 aa6.39□□□□□ -1.39
TRS23YDR246W SPO74P45819 413 aa6.39□□□□□ -1.39
TRS23YDR246W MCD1Q12158 566 aa6.39□□□□□ -1.39
TRS23YDR246W VMA4P22203 233 aaKnown RBP6.38□□□□□ -1.39
TRS23YDR246W MCM2P29469 868 aa6.38□□□□□ -1.39
TRS23YDR246W SCT1P32784 759 aa6.38□□□□□ -1.39
TRS23YDR246W WHI3P34761 661 aaKnown RBP6.38□□□□□ -1.39
TRS23YDR246W RPS26AP39938 119 aaKnown RBP6.38□□□□□ -1.39
TRS23YDR246W RPS26BP39939 119 aaKnown RBP6.38□□□□□ -1.39
TRS23YDR246W YJR107WP47145 328 aa6.38□□□□□ -1.39
TRS23YDR246W UTP5Q04177 643 aaKnown RBP6.38□□□□□ -1.39
TRS23YDR246W GLT1Q12680 2145 aaKnown RBP6.37□□□□□ -1.39
TRS23YDR246W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.37□□□□□ -1.39not detected
TRS23YDR246W RPS4AP0CX35 261 aaKnown RBP6.37□□□□□ -1.39
TRS23YDR246W RPS4BP0CX36 261 aaKnown RBP6.37□□□□□ -1.39
TRS23YDR246W TOS1P38288 455 aa6.37□□□□□ -1.39
TRS23YDR246W YAR028WP39548 234 aa6.37□□□□□ -1.39
TRS23YDR246W CHZ1P40019 153 aaPredicted RBP6.37□□□□□ -1.39
TRS23YDR246W XKS1P42826 600 aa6.37□□□□□ -1.39
TRS23YDR246W MRPS18P42847 217 aa6.37□□□□□ -1.39
TRS23YDR246W CIT3P43635 486 aa6.37□□□□□ -1.39
TRS23YDR246W YGL140CP53120 1219 aa6.37□□□□□ -1.39
TRS23YDR246W DNF3Q12674 1656 aa6.36□□□□□ -1.39
TRS23YDR246W HAP1P0CE41 1502 aa6.36□□□□□ -1.39
TRS23YDR246W CFT1Q06632 1357 aaKnown RBP6.36□□□□□ -1.39
TRS23YDR246W CYC7P00045 113 aa6.36□□□□□ -1.39
TRS23YDR246W RAD2P07276 1031 aa6.36□□□□□ -1.39
TRS23YDR246W CYC8P14922 966 aa6.36□□□□□ -1.39
TRS23YDR246W PRE9P23638 258 aaKnown RBP6.36□□□□□ -1.39
TRS23YDR246W NFS1P25374 497 aa6.36□□□□□ -1.39
TRS23YDR246W SMY2P32909 740 aaKnown RBP6.36□□□□□ -1.39
TRS23YDR246W PIC2P40035 300 aa6.36□□□□□ -1.39
TRS23YDR246W FYV10P40492 516 aa6.36□□□□□ -1.39
TRS23YDR246W SPR28Q04921 423 aa6.36□□□□□ -1.39
TRS23YDR246W YML133CQ03099 1374 aa6.35□□□□□ -1.39
TRS23YDR246W YLL067CQ07888 1374 aa6.35□□□□□ -1.39
TRS23YDR246W YLL066CQ99208 1374 aa6.35□□□□□ -1.39
TRS23YDR246W SEC23P15303 768 aaKnown RBP6.35□□□□□ -1.39
TRS23YDR246W NNK1P36003 928 aa6.35□□□□□ -1.39
TRS23YDR246W ALT1P52893 592 aa6.35□□□□□ -1.39
TRS23YDR246W NSI1Q12457 570 aa6.35□□□□□ -1.39
TRS23YDR246W SNF2P22082 1703 aa6.35□□□□□ -1.39
TRS23YDR246W YEF3P16521 1044 aaKnown RBP6.34□□□□□ -1.39
TRS23YDR246W SEC8P32855 1065 aa6.34□□□□□ -1.39
TRS23YDR246W LIP5P32875 414 aa6.34□□□□□ -1.39
TRS23YDR246W HSE1P38753 452 aa6.34□□□□□ -1.39
TRS23YDR246W FUN12P39730 1002 aaKnown RBP6.34□□□□□ -1.39
TRS23YDR246W INP52P50942 1183 aa6.34□□□□□ -1.39
TRS23YDR246W NRD1P53617 575 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39 RIP-Chip
TRS23YDR246W YNR063WP53749 607 aa6.34□□□□□ -1.39
TRS23YDR246W YOR059CQ08448 450 aaKnown RBP6.34□□□□□ -1.39
TRS23YDR246W LAP2Q10740 671 aa6.34□□□□□ -1.39
TRS23YDR246W RDH54P38086 958 aa6.33□□□□□ -1.4
TRS23YDR246W RCM1P53972 490 aa6.33□□□□□ -1.4
TRS23YDR246W KRE5P22023 1365 aa6.32□□□□□ -1.4
TRS23YDR246W RPP0P05317 312 aaKnown RBP6.32□□□□□ -1.4
TRS23YDR246W HEM13P11353 328 aaKnown RBP6.32□□□□□ -1.4
TRS23YDR246W NAP1P25293 417 aaKnown RBP6.32□□□□□ -1.4
TRS23YDR246W PEP7P32609 515 aa6.32□□□□□ -1.4
TRS23YDR246W ADD66P36040 267 aa6.32□□□□□ -1.4
TRS23YDR246W EAR1Q03212 550 aa6.32□□□□□ -1.4
TRS23YDR246W OYE2Q03558 400 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 42.3 ms