RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	ERT1	P38140	529 aa		5.36	□□□□□ -1.55
SUP35	YDR172W	YER130C	P39959	443 aa		5.36	□□□□□ -1.55
SUP35	YDR172W	FYV10	P40492	516 aa		5.36	□□□□□ -1.55
SUP35	YDR172W	AAD14	P42884	376 aa		5.36	□□□□□ -1.55
SUP35	YDR172W	IOC3	P43596	787 aa		5.36	□□□□□ -1.55
SUP35	YDR172W	RPS15	Q01855	142 aa	Known RBP	5.36	□□□□□ -1.55
SUP35	YDR172W	GRX6	Q12438	231 aa		5.36	□□□□□ -1.55
SUP35	YDR172W	CYB2	P00175	591 aa		5.35	□□□□□ -1.55
SUP35	YDR172W	ATE1	P16639	503 aa		5.35	□□□□□ -1.55
SUP35	YDR172W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	5.35	□□□□□ -1.55	not detected
SUP35	YDR172W	VPS1	P21576	704 aa	Known RBP	5.35	□□□□□ -1.55
SUP35	YDR172W	TGL4	P36165	910 aa		5.35	□□□□□ -1.55
SUP35	YDR172W	BOI1	P38041	980 aa	Known RBP	5.35	□□□□□ -1.55
SUP35	YDR172W	RPN10	P38886	268 aa	Known RBP	5.35	□□□□□ -1.55
SUP35	YDR172W	RRP8	P38961	392 aa	Known RBP	5.35	□□□□□ -1.55
SUP35	YDR172W	EAF6	P47128	113 aa		5.35	□□□□□ -1.55
SUP35	YDR172W	UFD2	P54860	961 aa		5.35	□□□□□ -1.55
SUP35	YDR172W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.35	□□□□□ -1.55	not detected
SUP35	YDR172W	PSF3	Q12146	194 aa		5.35	□□□□□ -1.55
SUP35	YDR172W	CDC6	P09119	513 aa		5.35	□□□□□ -1.55
SUP35	YDR172W	MIP1	P15801	1254 aa		5.35	□□□□□ -1.55
SUP35	YDR172W	MCM4	P30665	933 aa	Known RBP	5.35	□□□□□ -1.55
SUP35	YDR172W	SRP40	P32583	406 aa	Predicted RBP	5.35	□□□□□ -1.55
SUP35	YDR172W	MDL2	P33311	773 aa		5.35	□□□□□ -1.55
SUP35	YDR172W	MRPL10	P36520	322 aa		5.35	□□□□□ -1.55
SUP35	YDR172W	GEF1	P37020	779 aa		5.35	□□□□□ -1.55
SUP35	YDR172W	YHL050C	P38721	697 aa		5.35	□□□□□ -1.55
SUP35	YDR172W	YFH7	P43591	353 aa		5.35	□□□□□ -1.55
SUP35	YDR172W	JJJ2	P46997	583 aa		5.35	□□□□□ -1.55
SUP35	YDR172W	NSG2	P53898	299 aa		5.35	□□□□□ -1.55
SUP35	YDR172W	ARG82	P07250	355 aa		5.34	□□□□□ -1.55
SUP35	YDR172W	SWI4	P25302	1093 aa	Known RBP	5.34	□□□□□ -1.55
SUP35	YDR172W	UTR2	P32623	467 aa		5.34	□□□□□ -1.55
SUP35	YDR172W	ANP1	P32629	500 aa		5.34	□□□□□ -1.55
SUP35	YDR172W	YER156C	P40093	338 aa	Known RBP	5.34	□□□□□ -1.55
SUP35	YDR172W	TFC6	Q06339	672 aa		5.34	□□□□□ -1.55
SUP35	YDR172W	DCS2	Q12123	353 aa		5.34	□□□□□ -1.55
SUP35	YDR172W	CTT1	P06115	562 aa		5.33	□□□□□ -1.56
SUP35	YDR172W	SES1	P07284	462 aa	Known RBP	5.33	□□□□□ -1.56
SUP35	YDR172W	RET1	P22276	1149 aa	Known RBP	5.33	□□□□□ -1.56
SUP35	YDR172W	PUP1	P25043	261 aa		5.33	□□□□□ -1.56
SUP35	YDR172W	GSM1	P42950	618 aa		5.33	□□□□□ -1.56
SUP35	YDR172W	YPT11	P48559	417 aa		5.33	□□□□□ -1.56
SUP35	YDR172W	TIM50	Q02776	476 aa		5.33	□□□□□ -1.56
SUP35	YDR172W	ETT1	Q08421	412 aa	Known RBP	5.33	□□□□□ -1.56
SUP35	YDR172W	WTM2	Q12206	467 aa		5.33	□□□□□ -1.56
SUP35	YDR172W	PGI1	P12709	554 aa	Known RBP	5.33	□□□□□ -1.56
SUP35	YDR172W	RGP1	P16664	663 aa		5.33	□□□□□ -1.56
SUP35	YDR172W	FLO1	P32768	1537 aa		5.33	□□□□□ -1.56
SUP35	YDR172W	MYO3	P36006	1272 aa		5.33	□□□□□ -1.56
SUP35	YDR172W	SLX8	P40072	274 aa		5.33	□□□□□ -1.56
SUP35	YDR172W	CSM2	P40465	213 aa		5.33	□□□□□ -1.56
SUP35	YDR172W	SRF1	Q12516	437 aa		5.33	□□□□□ -1.56
SUP35	YDR172W	HXK1	P04806	485 aa	Known RBP	5.32	□□□□□ -1.56
SUP35	YDR172W	SNF3	P10870	884 aa		5.32	□□□□□ -1.56
SUP35	YDR172W	GAL2	P13181	574 aa		5.32	□□□□□ -1.56
SUP35	YDR172W	SSA4	P22202	642 aa	Known RBP	5.32	□□□□□ -1.56
SUP35	YDR172W	GSY2	P27472	705 aa		5.32	□□□□□ -1.56
SUP35	YDR172W	ICL1	P28240	557 aa	Predicted RBP	5.32	□□□□□ -1.56
SUP35	YDR172W	MPE1	P35728	441 aa	Known RBP	5.32	□□□□□ -1.56
SUP35	YDR172W	NOC2	P39744	710 aa	Known RBP	5.32	□□□□□ -1.56
SUP35	YDR172W	NUP85	P46673	744 aa		5.32	□□□□□ -1.56
SUP35	YDR172W	KIN4	Q01919	800 aa		5.32	□□□□□ -1.56
SUP35	YDR172W	MRD1	Q06106	887 aa	Known RBP	5.32	□□□□□ -1.56
SUP35	YDR172W	SUB2	Q07478	446 aa	Known RBP	5.32	□□□□□ -1.56
SUP35	YDR172W	WRS1	Q12109	432 aa	Known RBP	5.32	□□□□□ -1.56
SUP35	YDR172W	TAF13	P11747	167 aa		5.32	□□□□□ -1.56
SUP35	YDR172W	DAT1	P13483	248 aa	Known RBP	5.32	□□□□□ -1.56
SUP35	YDR172W	CYC8	P14922	966 aa		5.32	□□□□□ -1.56
SUP35	YDR172W	CBP3	P21560	335 aa		5.32	□□□□□ -1.56
SUP35	YDR172W	PHO87	P25360	923 aa		5.32	□□□□□ -1.56
SUP35	YDR172W	PRO3	P32263	286 aa	Known RBP	5.32	□□□□□ -1.56
SUP35	YDR172W	YKU70	P32807	602 aa		5.32	□□□□□ -1.56
SUP35	YDR172W	RFT1	P38206	574 aa	Predicted RBP	5.32	□□□□□ -1.56
SUP35	YDR172W	RRM3	P38766	723 aa		5.32	□□□□□ -1.56
SUP35	YDR172W	RTS1	P38903	757 aa		5.32	□□□□□ -1.56
SUP35	YDR172W	PCI8	P40512	444 aa		5.32	□□□□□ -1.56
SUP35	YDR172W	ACS2	P52910	683 aa	Known RBP	5.32	□□□□□ -1.56
SUP35	YDR172W	PIP2	P52960	996 aa		5.32	□□□□□ -1.56
SUP35	YDR172W	GAS5	Q08193	484 aa		5.32	□□□□□ -1.56
SUP35	YDR172W	NOB1	Q08444	459 aa	Known RBP	5.32	□□□□□ -1.56
SUP35	YDR172W	YOR111W	Q99210	232 aa		5.32	□□□□□ -1.56
SUP35	YDR172W	TOP1	P04786	769 aa		5.31	□□□□□ -1.56
SUP35	YDR172W	RIT1	P23796	513 aa		5.31	□□□□□ -1.56
SUP35	YDR172W	URA1	P28272	314 aa	Predicted RBP	5.31	□□□□□ -1.56
SUP35	YDR172W	BMH2	P34730	273 aa	Known RBP	5.31	□□□□□ -1.56
SUP35	YDR172W	MNR2	P35724	969 aa		5.31	□□□□□ -1.56
SUP35	YDR172W	VID27	P40157	782 aa		5.31	□□□□□ -1.56
SUP35	YDR172W	MSH4	P40965	878 aa	Predicted RBP	5.31	□□□□□ -1.56
SUP35	YDR172W	PRP42	Q03776	544 aa	Known RBP	5.31	□□□□□ -1.56
SUP35	YDR172W	TSC13	Q99190	310 aa		5.31	□□□□□ -1.56
SUP35	YDR172W	GSC2	P40989	1895 aa		5.31	□□□□□ -1.56
SUP35	YDR172W	MAK31	P23059	88 aa		5.3	□□□□□ -1.56
SUP35	YDR172W	MFT1	P33441	392 aa	Known RBP	5.3	□□□□□ -1.56
SUP35	YDR172W	MNN4	P36044	1178 aa		5.3	□□□□□ -1.56
SUP35	YDR172W	PSY4	P38193	441 aa		5.3	□□□□□ -1.56
SUP35	YDR172W	WAR1	Q03631	944 aa		5.3	□□□□□ -1.56
SUP35	YDR172W	YML083C	Q04526	418 aa		5.3	□□□□□ -1.56
SUP35	YDR172W	GET3	Q12154	354 aa	Known RBP	5.3	□□□□□ -1.56
SUP35	YDR172W	MET6	P05694	767 aa	Known RBP	5.3	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms