RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W SPO21Q12411 609 aa5.32□□□□□ -1.56
UBC9YDL064W RKM4Q12504 494 aa5.32□□□□□ -1.56
UBC9YDL064W DBP2P24783 546 aaKnown RBP5.31□□□□□ -1.56
UBC9YDL064W YKL107WP34251 309 aa5.31□□□□□ -1.56
UBC9YDL064W HNT2P49775 206 aa5.31□□□□□ -1.56
UBC9YDL064W BDF2Q07442 638 aa5.31□□□□□ -1.56
UBC9YDL064W YKL091CP33324 310 aaKnown RBP5.3□□□□□ -1.56
UBC9YDL064W PGM1P33401 570 aaKnown RBP5.3□□□□□ -1.56
UBC9YDL064W MXR1P40029 184 aa5.3□□□□□ -1.56
UBC9YDL064W TIM54P47045 478 aa5.3□□□□□ -1.56
UBC9YDL064W YJL049WP47048 450 aa5.3□□□□□ -1.56
UBC9YDL064W SHE9Q04172 456 aa5.3□□□□□ -1.56
UBC9YDL064W RCL1Q08096 367 aaPredicted RBP5.3□□□□□ -1.56
UBC9YDL064W YPL260WQ08977 551 aa5.3□□□□□ -1.56
UBC9YDL064W CDC53Q12018 815 aaKnown RBP5.3□□□□□ -1.56
UBC9YDL064W PUS1Q12211 544 aaKnown RBP5.3□□□□□ -1.56
UBC9YDL064W RPL8BP29453 256 aaKnown RBP5.29□□□□□ -1.56
UBC9YDL064W SAF1P38352 637 aa5.29□□□□□ -1.56
UBC9YDL064W FMP25Q08023 583 aa5.29□□□□□ -1.56
UBC9YDL064W GNT1Q12096 491 aa5.29□□□□□ -1.56
UBC9YDL064W YLR122CQ12312 125 aa5.29□□□□□ -1.56
UBC9YDL064W YVC1Q12324 675 aa5.29□□□□□ -1.56
UBC9YDL064W RPL11AP0C0W9 174 aaKnown RBP5.28□□□□□ -1.56
UBC9YDL064W STI1P15705 589 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
UBC9YDL064W COQ2P32378 372 aa5.28□□□□□ -1.56
UBC9YDL064W YSC84P32793 468 aa5.28□□□□□ -1.56
UBC9YDL064W PIN4P34217 668 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
UBC9YDL064W MRP8P35719 219 aa5.28□□□□□ -1.56
UBC9YDL064W PNT1P38969 423 aa5.28□□□□□ -1.56
UBC9YDL064W MMM1P41800 426 aa5.28□□□□□ -1.56
UBC9YDL064W PFD1P46988 109 aa5.28□□□□□ -1.56
UBC9YDL064W CCT8P47079 568 aaKnown RBP5.28□□□□□ -1.56
UBC9YDL064W SPP382Q06411 708 aaPredicted RBP5.28□□□□□ -1.56
UBC9YDL064W HRK1Q08732 759 aaKnown RBP5.28□□□□□ -1.56
UBC9YDL064W RPL11BQ3E757 174 aaPredicted RBP5.28□□□□□ -1.56
UBC9YDL064W CIT2P08679 460 aa5.27□□□□□ -1.57
UBC9YDL064W YHR020WP38708 688 aaKnown RBP5.27□□□□□ -1.57
UBC9YDL064W IRR1P40541 1150 aa5.27□□□□□ -1.57
UBC9YDL064W RCM1P53972 490 aa5.27□□□□□ -1.57
UBC9YDL064W UBX5Q06682 500 aa5.27□□□□□ -1.57
UBC9YDL064W SBP1P10080 294 aaKnown RBP5.26□□□□□ -1.57
UBC9YDL064W SNF5P18480 905 aa5.26□□□□□ -1.57
UBC9YDL064W PBP2P38151 413 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
UBC9YDL064W PBY1P38254 753 aa5.26□□□□□ -1.57
UBC9YDL064W RSP5P39940 809 aaKnown RBP5.26□□□□□ -1.57
UBC9YDL064W HOS3Q02959 697 aaKnown RBP5.26□□□□□ -1.57
UBC9YDL064W FLC1Q08967 793 aa5.26□□□□□ -1.57
UBC9YDL064W SAM35P14693 329 aa5.25□□□□□ -1.57
UBC9YDL064W BUD6P41697 788 aa5.25□□□□□ -1.57
UBC9YDL064W OYE3P41816 400 aaPredicted RBP5.25□□□□□ -1.57
UBC9YDL064W KRI1P42846 591 aaKnown RBP5.25□□□□□ -1.57
UBC9YDL064W CIT3P43635 486 aa5.25□□□□□ -1.57
UBC9YDL064W YGR125WP53273 1036 aa5.25□□□□□ -1.57
UBC9YDL064W YGR130CP53278 816 aa5.25□□□□□ -1.57
UBC9YDL064W TNA1P53322 534 aa5.25□□□□□ -1.57
UBC9YDL064W RPN4Q03465 531 aa5.25□□□□□ -1.57
UBC9YDL064W SPO75Q07798 868 aa5.25□□□□□ -1.57
UBC9YDL064W CIT1P00890 479 aa5.24□□□□□ -1.57
UBC9YDL064W TRP3P00937 484 aa5.24□□□□□ -1.57
UBC9YDL064W GCD1P09032 578 aaPredicted RBP5.24□□□□□ -1.57
UBC9YDL064W CHS2P14180 963 aa5.24□□□□□ -1.57
UBC9YDL064W ARE1P25628 610 aa5.24□□□□□ -1.57
UBC9YDL064W KAE1P36132 386 aa5.24□□□□□ -1.57
UBC9YDL064W PEX7P39108 375 aa5.24□□□□□ -1.57
UBC9YDL064W RPN3P40016 523 aaKnown RBP5.24□□□□□ -1.57
UBC9YDL064W ALR2P43553 858 aa5.24□□□□□ -1.57
UBC9YDL064W EAF1Q06337 982 aa5.24□□□□□ -1.57
UBC9YDL064W PPM2Q08282 695 aa5.24□□□□□ -1.57
UBC9YDL064W MSB1P21339 1137 aaKnown RBP5.23□□□□□ -1.57
UBC9YDL064W YKL151CP36059 337 aa5.23□□□□□ -1.57
UBC9YDL064W YHL012WP38709 493 aa5.23□□□□□ -1.57
UBC9YDL064W UTP8P53276 713 aaKnown RBP5.23□□□□□ -1.57
UBC9YDL064W OSH2Q12451 1283 aa5.23□□□□□ -1.57
UBC9YDL064W YOR131CQ12486 218 aa5.23□□□□□ -1.57
UBC9YDL064W HSP60P19882 572 aaKnown RBP5.22□□□□□ -1.57
UBC9YDL064W HBS1P32769 611 aaKnown RBP5.22□□□□□ -1.57
UBC9YDL064W SLA2P33338 968 aa5.22□□□□□ -1.57
UBC9YDL064W UGA2P38067 497 aa5.22□□□□□ -1.57
UBC9YDL064W BAP2P38084 609 aa5.22□□□□□ -1.57
UBC9YDL064W GTS1P40956 396 aa5.22□□□□□ -1.57
UBC9YDL064W LSB3P43603 459 aaKnown RBP5.22□□□□□ -1.57
UBC9YDL064W RNH70P53331 553 aa5.22□□□□□ -1.57
UBC9YDL064W HRQ1Q05549 1077 aa5.22□□□□□ -1.57
UBC9YDL064W YDR306CQ06640 478 aa5.22□□□□□ -1.57
UBC9YDL064W TRE1Q08919 783 aa5.22□□□□□ -1.57
UBC9YDL064W ERR1P0CX10 437 aa5.21□□□□□ -1.58
UBC9YDL064W ERR2P0CX11 437 aa5.21□□□□□ -1.58
UBC9YDL064W RTA1P53047 317 aa5.21□□□□□ -1.58
UBC9YDL064W SSY1Q03770 852 aa5.21□□□□□ -1.58
UBC9YDL064W DUS3Q06053 668 aaKnown RBP5.21□□□□□ -1.58
UBC9YDL064W FPR4Q06205 392 aaPredicted RBP5.21□□□□□ -1.58
UBC9YDL064W COQ4O13525 335 aa5.2□□□□□ -1.58
UBC9YDL064W PRO1P32264 428 aa5.2□□□□□ -1.58
UBC9YDL064W TIM23P32897 222 aa5.2□□□□□ -1.58
UBC9YDL064W YBR284WP38150 797 aa5.2□□□□□ -1.58
UBC9YDL064W PTC7P38797 343 aa5.2□□□□□ -1.58
UBC9YDL064W GEM1P39722 662 aa5.2□□□□□ -1.58
UBC9YDL064W GUS1P46655 708 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
UBC9YDL064W ERP6P53198 216 aa5.2□□□□□ -1.58
UBC9YDL064W RSC58Q07979 502 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms