RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W YVC1Q12324 675 aa4.71□□□□□ -1.65
TSR1YDL060W GRX4P32642 244 aa4.71□□□□□ -1.66
TSR1YDL060W PBP2P38151 413 aaKnown RBP RIP-Chip data4.71□□□□□ -1.66not detected
TSR1YDL060W PIC2P40035 300 aa4.71□□□□□ -1.66
TSR1YDL060W CDC53Q12018 815 aaKnown RBP4.71□□□□□ -1.66
TSR1YDL060W STI1P15705 589 aaKnown RBP RIP-Chip data4.7□□□□□ -1.66not detected
TSR1YDL060W RAD27P26793 382 aa4.7□□□□□ -1.66
TSR1YDL060W NMD3P38861 518 aaKnown RBP4.7□□□□□ -1.66
TSR1YDL060W OYE3P41816 400 aaPredicted RBP4.7□□□□□ -1.66
TSR1YDL060W CTH1P47976 325 aa4.7□□□□□ -1.66
TSR1YDL060W PRO1P32264 428 aa4.7□□□□□ -1.66
TSR1YDL060W RDH54P38086 958 aa4.7□□□□□ -1.66
TSR1YDL060W QNS1P38795 714 aaKnown RBP4.7□□□□□ -1.66
TSR1YDL060W YJL049WP47048 450 aa4.7□□□□□ -1.66
TSR1YDL060W MRL1Q06815 381 aa4.7□□□□□ -1.66
TSR1YDL060W PTC5Q12511 572 aa4.7□□□□□ -1.66
TSR1YDL060W SSY1Q03770 852 aa4.69□□□□□ -1.66
TSR1YDL060W YOL057WQ08225 711 aa4.69□□□□□ -1.66
TSR1YDL060W GIN4Q12263 1142 aa4.69□□□□□ -1.66
TSR1YDL060W CLN2P20438 545 aa4.69□□□□□ -1.66
TSR1YDL060W YHL012WP38709 493 aa4.69□□□□□ -1.66
TSR1YDL060W PMC1P38929 1173 aaPredicted RBP4.69□□□□□ -1.66
TSR1YDL060W TPM2P40414 161 aa4.69□□□□□ -1.66
TSR1YDL060W FOL2P51601 243 aaKnown RBP4.69□□□□□ -1.66
TSR1YDL060W BDF2Q07442 638 aa4.69□□□□□ -1.66
TSR1YDL060W PTC7P38797 343 aa4.68□□□□□ -1.66
TSR1YDL060W RMD1Q03441 430 aa4.68□□□□□ -1.66
TSR1YDL060W POL12P38121 705 aaPredicted RBP4.68□□□□□ -1.66
TSR1YDL060W MNN1P39106 762 aa4.68□□□□□ -1.66
TSR1YDL060W GTS1P40956 396 aa4.68□□□□□ -1.66
TSR1YDL060W YJR142WP47173 342 aa4.68□□□□□ -1.66
TSR1YDL060W AVT1P47082 602 aa4.67□□□□□ -1.66
TSR1YDL060W HDA2Q06629 674 aa4.67□□□□□ -1.66
TSR1YDL060W YOR131CQ12486 218 aa4.67□□□□□ -1.66
TSR1YDL060W YGR161W-CQ3E744 92 aa4.67□□□□□ -1.66
TSR1YDL060W MON2P48563 1636 aaPredicted RBP4.67□□□□□ -1.66
TSR1YDL060W MDL2P33311 773 aa4.67□□□□□ -1.66
TSR1YDL060W NBA1Q08229 501 aaKnown RBP4.67□□□□□ -1.66
TSR1YDL060W HEM13P11353 328 aaKnown RBP4.66□□□□□ -1.66
TSR1YDL060W HSP78P33416 811 aa4.66□□□□□ -1.66
TSR1YDL060W NAB3P38996 802 aaKnown RBP RIP-Chip data4.66□□□□□ -1.66not detected
TSR1YDL060W YJL045WP47052 634 aa4.66□□□□□ -1.66
TSR1YDL060W ENT3P47160 408 aa4.66□□□□□ -1.66
TSR1YDL060W SIW14P53965 281 aa4.66□□□□□ -1.66
TSR1YDL060W ROD1Q02805 837 aa4.66□□□□□ -1.66
TSR1YDL060W COQ4O13525 335 aa4.65□□□□□ -1.66
TSR1YDL060W MET6P05694 767 aaKnown RBP4.65□□□□□ -1.66
TSR1YDL060W ALG3P38179 458 aa4.65□□□□□ -1.66
TSR1YDL060W PEX7P39108 375 aa4.65□□□□□ -1.66
TSR1YDL060W ZDS1P50111 915 aaKnown RBP4.65□□□□□ -1.66
TSR1YDL060W MMS22Q06164 1454 aa4.65□□□□□ -1.66
TSR1YDL060W GCR1P07261 785 aa4.65□□□□□ -1.67
TSR1YDL060W PET112P33893 541 aa4.65□□□□□ -1.67
TSR1YDL060W TAT2P38967 592 aa4.65□□□□□ -1.67
TSR1YDL060W ECL1P48235 211 aa4.65□□□□□ -1.67
TSR1YDL060W KIP1P28742 1111 aa4.64□□□□□ -1.67
TSR1YDL060W HUL5P53119 910 aa4.64□□□□□ -1.67
TSR1YDL060W CWC24P53769 259 aa4.64□□□□□ -1.67
TSR1YDL060W RTT10Q08924 1013 aa4.64□□□□□ -1.67
TSR1YDL060W DFG16Q99234 619 aa4.64□□□□□ -1.67
TSR1YDL060W GRX1P25373 110 aaKnown RBP4.64□□□□□ -1.67
TSR1YDL060W AIM26P32858 118 aa4.64□□□□□ -1.67
TSR1YDL060W CCZ1P38273 704 aa4.64□□□□□ -1.67
TSR1YDL060W YGL081WP53156 320 aa4.64□□□□□ -1.67
TSR1YDL060W RSB1Q08417 382 aa4.64□□□□□ -1.67
TSR1YDL060W YPL260WQ08977 551 aa4.64□□□□□ -1.67
TSR1YDL060W TMA46Q12000 345 aaKnown RBP4.64□□□□□ -1.67
TSR1YDL060W SRO9P25567 434 aaKnown RBP4.63□□□□□ -1.67
TSR1YDL060W SYP1P25623 870 aaKnown RBP4.63□□□□□ -1.67
TSR1YDL060W YSC84P32793 468 aa4.63□□□□□ -1.67
TSR1YDL060W UBP12P39538 1254 aa4.63□□□□□ -1.67
TSR1YDL060W NUP82P40368 713 aa4.63□□□□□ -1.67
TSR1YDL060W IRC24P40580 263 aa4.63□□□□□ -1.67
TSR1YDL060W TNA1P53322 534 aa4.63□□□□□ -1.67
TSR1YDL060W INO80P53115 1489 aa4.63□□□□□ -1.67
TSR1YDL060W PUF4P25339 888 aaKnown RBP RIP-Chip data4.63□□□□□ -1.67 RIP-Chip
TSR1YDL060W MKK2P32491 506 aa4.63□□□□□ -1.67
TSR1YDL060W AFG2P32794 780 aa4.63□□□□□ -1.67
TSR1YDL060W GPB2P39717 880 aa4.63□□□□□ -1.67
TSR1YDL060W HOS3Q02959 697 aaKnown RBP4.63□□□□□ -1.67
TSR1YDL060W SPO21Q12411 609 aa4.63□□□□□ -1.67
TSR1YDL060W SSD1P24276 1250 aaKnown RBP RIP-Chip data4.62□□□□□ -1.67not detected
TSR1YDL060W MNR2P35724 969 aa4.62□□□□□ -1.67
TSR1YDL060W YEN1P40028 759 aa4.62□□□□□ -1.67
TSR1YDL060W MDG1P53885 366 aa4.62□□□□□ -1.67
TSR1YDL060W RAT1Q02792 1006 aaKnown RBP4.62□□□□□ -1.67
TSR1YDL060W SPT7P35177 1332 aa4.62□□□□□ -1.67
TSR1YDL060W UFD4P33202 1483 aa4.62□□□□□ -1.67
TSR1YDL060W PPM2Q08282 695 aa4.62□□□□□ -1.67
TSR1YDL060W SAM35P14693 329 aa4.61□□□□□ -1.67
TSR1YDL060W TIM23P32897 222 aa4.61□□□□□ -1.67
TSR1YDL060W LRG1P35688 1017 aa4.61□□□□□ -1.67
TSR1YDL060W SEA4P38164 1038 aa4.61□□□□□ -1.67
TSR1YDL060W CNN1P43618 361 aa4.61□□□□□ -1.67
TSR1YDL060W YOR352WQ08816 343 aa4.61□□□□□ -1.67
TSR1YDL060W XRN1P22147 1528 aaKnown RBP4.61□□□□□ -1.67
TSR1YDL060W GRX7P38068 203 aa4.61□□□□□ -1.67
TSR1YDL060W RGD1P38339 666 aa4.61□□□□□ -1.67
TSR1YDL060W PRP43P53131 767 aaKnown RBP4.61□□□□□ -1.67
TSR1YDL060W UTP14Q04500 899 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms