RNA–Protein interactions for RNA: YCR087W

YCR087W, Transcript of Dubious open reading frame, yeast

Gene YCR087W, Length 516 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCR087W	YCR087W	KTR2	P33550	425 aa		11.35	□□□□□ -0.59
YCR087W	YCR087W	TTI1	P36097	1038 aa		11.35	□□□□□ -0.59
YCR087W	YCR087W	GIS4	Q04233	774 aa		11.35	□□□□□ -0.59
YCR087W	YCR087W	ARP6	Q12509	438 aa		11.35	□□□□□ -0.59
YCR087W	YCR087W	TAO3	P40468	2376 aa		11.34	□□□□□ -0.59
YCR087W	YCR087W	ECM29	P38737	1868 aa		11.34	□□□□□ -0.59
YCR087W	YCR087W	MAS2	P11914	482 aa		11.34	□□□□□ -0.59
YCR087W	YCR087W	MSC7	P38694	644 aa		11.34	□□□□□ -0.59
YCR087W	YCR087W	MYO1	P08964	1928 aa		11.33	□□□□□ -0.6
YCR087W	YCR087W	PGK1	P00560	416 aa	Known RBP	11.33	□□□□□ -0.6
YCR087W	YCR087W	TVP38	P36164	337 aa		11.33	□□□□□ -0.6
YCR087W	YCR087W	RPS7B	P48164	190 aa	Known RBP	11.33	□□□□□ -0.6
YCR087W	YCR087W	ZPR1	P53303	486 aa	Known RBP	11.33	□□□□□ -0.6
YCR087W	YCR087W	RET3	P53600	189 aa		11.33	□□□□□ -0.6
YCR087W	YCR087W	DSE4	P53753	1117 aa		11.33	□□□□□ -0.6
YCR087W	YCR087W	MFM1	Q02783	413 aa		11.33	□□□□□ -0.6
YCR087W	YCR087W	MSC2	Q03455	724 aa		11.33	□□□□□ -0.6
YCR087W	YCR087W	PHM6	Q05637	104 aa		11.33	□□□□□ -0.6
YCR087W	YCR087W	YLR407W	Q06070	228 aa		11.33	□□□□□ -0.6
YCR087W	YCR087W	TIP41	Q12199	356 aa		11.33	□□□□□ -0.6
YCR087W	YCR087W	NBL1	Q3E7Y6	73 aa		11.33	□□□□□ -0.6
YCR087W	YCR087W	RPL19A	P0CX82	189 aa	Known RBP	11.32	□□□□□ -0.6
YCR087W	YCR087W	RPL19B	P0CX83	189 aa	Predicted RBP	11.32	□□□□□ -0.6
YCR087W	YCR087W	THR4	P16120	514 aa	Known RBP	11.32	□□□□□ -0.6
YCR087W	YCR087W	PGM1	P33401	570 aa	Known RBP	11.32	□□□□□ -0.6
YCR087W	YCR087W	FLR1	P38124	548 aa		11.32	□□□□□ -0.6
YCR087W	YCR087W	YLR326W	Q06170	240 aa	Known RBP	11.32	□□□□□ -0.6
YCR087W	YCR087W	GSY1	P23337	708 aa		11.31	□□□□□ -0.6
YCR087W	YCR087W	SCS3	P53012	380 aa		11.31	□□□□□ -0.6
YCR087W	YCR087W	YGR273C	P53329	174 aa		11.31	□□□□□ -0.6
YCR087W	YCR087W	FAR11	P53917	953 aa		11.31	□□□□□ -0.6
YCR087W	YCR087W	VPS72	Q03388	795 aa		11.31	□□□□□ -0.6
YCR087W	YCR087W	AIM33	Q04516	312 aa		11.31	□□□□□ -0.6
YCR087W	YCR087W	CRD1	Q07560	283 aa		11.31	□□□□□ -0.6
YCR087W	YCR087W	LDB19	Q12502	818 aa		11.31	□□□□□ -0.6
YCR087W	YCR087W	ILV1	P00927	576 aa	Known RBP	11.3	□□□□□ -0.6
YCR087W	YCR087W	MIP1	P15801	1254 aa		11.3	□□□□□ -0.6
YCR087W	YCR087W	CTF18	P49956	741 aa		11.3	□□□□□ -0.6
YCR087W	YCR087W	PSP2	P50109	593 aa	Known RBP	11.3	□□□□□ -0.6
YCR087W	YCR087W	ORC4	P54791	529 aa		11.3	□□□□□ -0.6
YCR087W	YCR087W	GPI13	Q07830	1017 aa		11.3	□□□□□ -0.6
YCR087W	YCR087W	HSP82	P02829	709 aa	Known RBP	11.29	□□□□□ -0.6
YCR087W	YCR087W	DUR3	P33413	735 aa		11.29	□□□□□ -0.6
YCR087W	YCR087W	YKR023W	P36119	530 aa	Known RBP	11.29	□□□□□ -0.6
YCR087W	YCR087W	ALD5	P40047	520 aa	Known RBP	11.29	□□□□□ -0.6
YCR087W	YCR087W	ENT3	P47160	408 aa		11.29	□□□□□ -0.6
YCR087W	YCR087W	YLH47	Q06493	454 aa		11.29	□□□□□ -0.6
YCR087W	YCR087W	WHI4	Q07655	649 aa	Known RBP	11.29	□□□□□ -0.6
YCR087W	YCR087W	ELG1	Q12050	791 aa		11.29	□□□□□ -0.6
YCR087W	YCR087W	ATG11	Q12527	1178 aa		11.29	□□□□□ -0.6
YCR087W	YCR087W	MRPL32	P25348	183 aa		11.28	□□□□□ -0.6
YCR087W	YCR087W	YEL025C	P39991	1188 aa		11.28	□□□□□ -0.6
YCR087W	YCR087W	CIT3	P43635	486 aa		11.28	□□□□□ -0.6
YCR087W	YCR087W	CTR1	P49573	406 aa		11.28	□□□□□ -0.6
YCR087W	YCR087W	PEX14	P53112	341 aa		11.28	□□□□□ -0.6
YCR087W	YCR087W	RTC4	P53850	401 aa		11.28	□□□□□ -0.6
YCR087W	YCR087W	GET3	Q12154	354 aa	Known RBP	11.28	□□□□□ -0.6
YCR087W	YCR087W	YDR524C-B	Q3E6R4	66 aa		11.28	□□□□□ -0.6
YCR087W	YCR087W	GRS1	P38088	690 aa	Known RBP	11.27	□□□□□ -0.61
YCR087W	YCR087W	GAA1	P39012	614 aa		11.27	□□□□□ -0.61
YCR087W	YCR087W	TRS120	Q04183	1289 aa		11.27	□□□□□ -0.61
YCR087W	YCR087W	SLK19	Q08581	821 aa	Known RBP	11.27	□□□□□ -0.61
YCR087W	YCR087W	CDC6	P09119	513 aa		11.26	□□□□□ -0.61
YCR087W	YCR087W	RME1	P32338	300 aa	Known RBP	11.26	□□□□□ -0.61
YCR087W	YCR087W	SUV3	P32580	737 aa		11.26	□□□□□ -0.61
YCR087W	YCR087W	GUA1	P38625	525 aa	Known RBP	11.26	□□□□□ -0.61
YCR087W	YCR087W	ORC6	P38826	435 aa		11.26	□□□□□ -0.61
YCR087W	YCR087W	SGM1	P47166	707 aa		11.26	□□□□□ -0.61
YCR087W	YCR087W	AZR1	P50080	613 aa		11.26	□□□□□ -0.61
YCR087W	YCR087W	PIL1	P53252	339 aa	Known RBP	11.26	□□□□□ -0.61
YCR087W	YCR087W	SMC5	Q08204	1093 aa		11.26	□□□□□ -0.61
YCR087W	YCR087W	YOR296W	Q08748	1289 aa		11.26	□□□□□ -0.61
YCR087W	YCR087W	RLF2	Q12495	606 aa		11.26	□□□□□ -0.61
YCR087W	YCR087W	PGI1	P12709	554 aa	Known RBP	11.25	□□□□□ -0.61
YCR087W	YCR087W	CDC48	P25694	835 aa	Known RBP	11.25	□□□□□ -0.61
YCR087W	YCR087W	POT1	P27796	417 aa	Known RBP RIP-Chip data	11.25	□□□□□ -0.61	not detected
YCR087W	YCR087W	SMY2	P32909	740 aa	Known RBP	11.25	□□□□□ -0.61
YCR087W	YCR087W	STT3	P39007	718 aa	Known RBP	11.25	□□□□□ -0.61
YCR087W	YCR087W	FYV10	P40492	516 aa		11.25	□□□□□ -0.61
YCR087W	YCR087W	AHC1	Q12433	566 aa		11.25	□□□□□ -0.61
YCR087W	YCR087W	ESS1	P22696	170 aa		11.24	□□□□□ -0.61
YCR087W	YCR087W	RFC5	P38251	354 aa		11.24	□□□□□ -0.61
YCR087W	YCR087W	GPD2	P41911	440 aa	Known RBP	11.24	□□□□□ -0.61
YCR087W	YCR087W	FOL2	P51601	243 aa	Known RBP	11.24	□□□□□ -0.61
YCR087W	YCR087W	SDA1	P53313	767 aa	Known RBP	11.24	□□□□□ -0.61
YCR087W	YCR087W	SMC6	Q12749	1114 aa		11.24	□□□□□ -0.61
YCR087W	YCR087W	CLN3	P13365	580 aa		11.23	□□□□□ -0.61
YCR087W	YCR087W	KIN82	P25341	720 aa		11.23	□□□□□ -0.61
YCR087W	YCR087W	BUD2	P33314	1104 aa		11.23	□□□□□ -0.61
YCR087W	YCR087W	UBP11	P36026	717 aa		11.23	□□□□□ -0.61
YCR087W	YCR087W	DID4	P36108	232 aa		11.23	□□□□□ -0.61
YCR087W	YCR087W	BRL1	P38770	471 aa		11.23	□□□□□ -0.61
YCR087W	YCR087W	VPS1	P21576	704 aa	Known RBP	11.22	□□□□□ -0.61
YCR087W	YCR087W	UBC1	P21734	215 aa	Known RBP	11.22	□□□□□ -0.61
YCR087W	YCR087W	FUB1	P25659	250 aa		11.22	□□□□□ -0.61
YCR087W	YCR087W	MSS51	P32335	436 aa		11.22	□□□□□ -0.61
YCR087W	YCR087W	IRE1	P32361	1115 aa		11.22	□□□□□ -0.61
YCR087W	YCR087W	ROG3	P43602	733 aa		11.22	□□□□□ -0.61
YCR087W	YCR087W	MCM6	P53091	1017 aa	Known RBP	11.22	□□□□□ -0.61
YCR087W	YCR087W	HFI1	Q12060	488 aa		11.22	□□□□□ -0.61

Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms