RNA–Protein interactions for RNA: YCR035C

RRP43, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP43, Length 1,185 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP43YCR035C PHO88P38264 188 aaPredicted RBP8.4□□□□□ -1.06
RRP43YCR035C RVS167P39743 482 aaKnown RBP8.4□□□□□ -1.06
RRP43YCR035C NET1P47035 1189 aa8.4□□□□□ -1.06
RRP43YCR035C YOR296WQ08748 1289 aa8.4□□□□□ -1.06
RRP43YCR035C OXR1Q08952 273 aa8.4□□□□□ -1.06
RRP43YCR035C TIP41Q12199 356 aa8.4□□□□□ -1.06
RRP43YCR035C SAM1P10659 382 aaKnown RBP8.39□□□□□ -1.07
RRP43YCR035C URA1P28272 314 aaPredicted RBP8.39□□□□□ -1.07
RRP43YCR035C IXR1P33417 597 aa8.39□□□□□ -1.07
RRP43YCR035C PAN5P38787 379 aa8.39□□□□□ -1.07
RRP43YCR035C ORC6P38826 435 aa8.39□□□□□ -1.07
RRP43YCR035C STT3P39007 718 aaKnown RBP8.39□□□□□ -1.07
RRP43YCR035C RET3P53600 189 aa8.39□□□□□ -1.07
RRP43YCR035C DSE4P53753 1117 aa8.39□□□□□ -1.07
RRP43YCR035C RBA50Q04418 439 aa8.39□□□□□ -1.07
RRP43YCR035C TMA64Q04600 565 aaKnown RBP8.39□□□□□ -1.07
RRP43YCR035C SLK19Q08581 821 aaKnown RBP8.39□□□□□ -1.07
RRP43YCR035C CFT2Q12102 859 aaPredicted RBP8.39□□□□□ -1.07
RRP43YCR035C PTC5Q12511 572 aa8.39□□□□□ -1.07
RRP43YCR035C AIM44Q99299 758 aa8.39□□□□□ -1.07
RRP43YCR035C DDP1Q99321 188 aaKnown RBP8.39□□□□□ -1.07
RRP43YCR035C PHR1P05066 565 aaKnown RBP RIP-Chip data8.38□□□□□ -1.07not detected
RRP43YCR035C MCM4P30665 933 aaKnown RBP8.38□□□□□ -1.07
RRP43YCR035C RPN12P32496 274 aa8.38□□□□□ -1.07
RRP43YCR035C TGL1P34163 548 aa8.38□□□□□ -1.07
RRP43YCR035C RFT1P38206 574 aaPredicted RBP8.38□□□□□ -1.07
RRP43YCR035C CIT3P43635 486 aa8.38□□□□□ -1.07
RRP43YCR035C RTC4P53850 401 aa8.38□□□□□ -1.07
RRP43YCR035C ALD6P54115 500 aaKnown RBP8.38□□□□□ -1.07
RRP43YCR035C ETT1Q08421 412 aaKnown RBP8.38□□□□□ -1.07
RRP43YCR035C LDB19Q12502 818 aa8.38□□□□□ -1.07
RRP43YCR035C RKM4Q12504 494 aa8.38□□□□□ -1.07
RRP43YCR035C TUF1P02992 437 aaKnown RBP8.37□□□□□ -1.07
RRP43YCR035C VMA2P16140 517 aaKnown RBP8.37□□□□□ -1.07
RRP43YCR035C ALG1P16661 449 aa8.37□□□□□ -1.07
RRP43YCR035C SUL1P38359 859 aa8.37□□□□□ -1.07
RRP43YCR035C ATG32P40458 529 aa8.37□□□□□ -1.07
RRP43YCR035C LIF1P53150 421 aa8.37□□□□□ -1.07
RRP43YCR035C SDA1P53313 767 aaKnown RBP8.37□□□□□ -1.07
RRP43YCR035C VMS1Q04311 632 aaKnown RBP8.37□□□□□ -1.07
RRP43YCR035C SPH1Q06160 661 aa8.37□□□□□ -1.07
RRP43YCR035C MMR1Q06324 491 aa8.37□□□□□ -1.07
RRP43YCR035C TRS33Q99394 268 aa8.37□□□□□ -1.07
RRP43YCR035C GPA1P08539 472 aa8.36□□□□□ -1.07
RRP43YCR035C CLC1P17891 233 aa8.36□□□□□ -1.07
RRP43YCR035C SRO9P25567 434 aaKnown RBP8.36□□□□□ -1.07
RRP43YCR035C UTR4P32626 227 aa8.36□□□□□ -1.07
RRP43YCR035C UGA4P32837 571 aa8.36□□□□□ -1.07
RRP43YCR035C SEC61P32915 480 aa8.36□□□□□ -1.07
RRP43YCR035C ASH1P34233 588 aa8.36□□□□□ -1.07
RRP43YCR035C YKR018CP36114 725 aa8.36□□□□□ -1.07
RRP43YCR035C APE3P37302 537 aaKnown RBP8.36□□□□□ -1.07
RRP43YCR035C YER130CP39959 443 aa8.36□□□□□ -1.07
RRP43YCR035C AIM33Q04516 312 aa8.36□□□□□ -1.07
RRP43YCR035C MYO1P08964 1928 aa8.35□□□□□ -1.07
RRP43YCR035C MCM3P24279 971 aaKnown RBP8.35□□□□□ -1.07
RRP43YCR035C SHP1P34223 423 aa8.35□□□□□ -1.07
RRP43YCR035C ERG7P38604 731 aa8.35□□□□□ -1.07
RRP43YCR035C YPT11P48559 417 aa8.35□□□□□ -1.07
RRP43YCR035C CUE3P53137 624 aaKnown RBP8.35□□□□□ -1.07
RRP43YCR035C KRE33P53914 1056 aaKnown RBP8.35□□□□□ -1.07
RRP43YCR035C ARP6Q12509 438 aa8.35□□□□□ -1.07
RRP43YCR035C SES1P07284 462 aaKnown RBP8.34□□□□□ -1.07
RRP43YCR035C GSY1P23337 708 aa8.34□□□□□ -1.07
RRP43YCR035C CDC60P26637 1090 aaKnown RBP8.34□□□□□ -1.07
RRP43YCR035C RTG1P32607 177 aa8.34□□□□□ -1.07
RRP43YCR035C YKT6P36015 200 aaKnown RBP8.34□□□□□ -1.07
RRP43YCR035C MCR1P36060 302 aaKnown RBP8.34□□□□□ -1.07
RRP43YCR035C RSC30P38781 883 aa8.34□□□□□ -1.07
RRP43YCR035C GAA1P39012 614 aa8.34□□□□□ -1.07
RRP43YCR035C GPB2P39717 880 aa8.34□□□□□ -1.07
RRP43YCR035C SPR3P41901 512 aa8.34□□□□□ -1.07
RRP43YCR035C YAF9P53930 226 aa8.34□□□□□ -1.07
RRP43YCR035C ORC4P54791 529 aa8.34□□□□□ -1.07
RRP43YCR035C DUS3Q06053 668 aaKnown RBP8.34□□□□□ -1.07
RRP43YCR035C SGD1Q06132 899 aa8.34□□□□□ -1.07
RRP43YCR035C GUD1Q07729 489 aa8.34□□□□□ -1.07
RRP43YCR035C CDC19P00549 500 aaKnown RBP8.33□□□□□ -1.08
RRP43YCR035C HIS4P00815 799 aaKnown RBP8.33□□□□□ -1.08
RRP43YCR035C ILV1P00927 576 aaKnown RBP8.33□□□□□ -1.08
RRP43YCR035C PKC1P24583 1151 aa8.33□□□□□ -1.08
RRP43YCR035C BMH1P29311 267 aaKnown RBP8.33□□□□□ -1.08
RRP43YCR035C KNS1P32350 737 aaPredicted RBP8.33□□□□□ -1.08
RRP43YCR035C EUG1P32474 517 aa8.33□□□□□ -1.08
RRP43YCR035C MOT2P34909 587 aaKnown RBP8.33□□□□□ -1.08
RRP43YCR035C NPR3P38742 1146 aa8.33□□□□□ -1.08
RRP43YCR035C ETP1P38748 585 aaKnown RBP8.33□□□□□ -1.08
RRP43YCR035C DAK2P43550 591 aa8.33□□□□□ -1.08
RRP43YCR035C UBA2P52488 636 aa8.33□□□□□ -1.08
RRP43YCR035C RSC1P53236 928 aa8.33□□□□□ -1.08
RRP43YCR035C OYE2Q03558 400 aaKnown RBP8.33□□□□□ -1.08
RRP43YCR035C BUL2Q03758 920 aaKnown RBP8.33□□□□□ -1.08
RRP43YCR035C PSR2Q07949 397 aa8.33□□□□□ -1.08
RRP43YCR035C TIF6Q12522 245 aaKnown RBP8.33□□□□□ -1.08
RRP43YCR035C CDC15P27636 974 aa8.32□□□□□ -1.08
RRP43YCR035C SRP40P32583 406 aaPredicted RBP8.32□□□□□ -1.08
RRP43YCR035C SAC6P32599 642 aaKnown RBP8.32□□□□□ -1.08
RRP43YCR035C ISW1P38144 1129 aa8.32□□□□□ -1.08
RRP43YCR035C YGR153WP48238 217 aa8.32□□□□□ -1.08
RRP43YCR035C MFM1Q02783 413 aa8.32□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms