RNA–Protein interactions for RNA: YCL004W

PGS1, Transcript of Phosphatidylglycerolphosphate synthase, yeast

Gene PGS1, Length 1,566 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PGS1	YCL004W	GDE1	Q02979	1223 aa		4.57	□□□□□ -1.68
PGS1	YCL004W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
PGS1	YCL004W	YOR378W	Q08902	515 aa		4.57	□□□□□ -1.68
PGS1	YCL004W	YLR125W	Q12138	136 aa		4.57	□□□□□ -1.68
PGS1	YCL004W	CMR1	Q12510	522 aa	Known RBP	4.57	□□□□□ -1.68
PGS1	YCL004W	NOP14	Q99207	810 aa	Known RBP	4.57	□□□□□ -1.68
PGS1	YCL004W	COB	P00163	385 aa		4.56	□□□□□ -1.68
PGS1	YCL004W	FAA3	P39002	694 aa		4.56	□□□□□ -1.68
PGS1	YCL004W	AIM21	P40563	679 aa		4.56	□□□□□ -1.68
PGS1	YCL004W	YNR029C	P53729	429 aa	Known RBP	4.56	□□□□□ -1.68
PGS1	YCL004W	RSC4	Q02206	625 aa		4.56	□□□□□ -1.68
PGS1	YCL004W	CDC34	P14682	295 aa		4.55	□□□□□ -1.68
PGS1	YCL004W	TRX2	P22803	104 aa	Known RBP	4.55	□□□□□ -1.68
PGS1	YCL004W	THI80	P35202	319 aa		4.55	□□□□□ -1.68
PGS1	YCL004W	YKL069W	P36088	180 aa		4.55	□□□□□ -1.68
PGS1	YCL004W	GIP4	P39732	760 aa		4.55	□□□□□ -1.68
PGS1	YCL004W	TAF1	P46677	1066 aa		4.55	□□□□□ -1.68
PGS1	YCL004W	TIM54	P47045	478 aa		4.55	□□□□□ -1.68
PGS1	YCL004W	TYW3	P53177	273 aa		4.55	□□□□□ -1.68
PGS1	YCL004W	YGR053C	P53234	283 aa		4.55	□□□□□ -1.68
PGS1	YCL004W	CDC55	Q00362	526 aa		4.55	□□□□□ -1.68
PGS1	YCL004W	TDA5	Q06417	326 aa	Known RBP	4.55	□□□□□ -1.68
PGS1	YCL004W	OPI10	Q08202	246 aa		4.55	□□□□□ -1.68
PGS1	YCL004W	TRE1	Q08919	783 aa		4.55	□□□□□ -1.68
PGS1	YCL004W	ERR1	P0CX10	437 aa		4.54	□□□□□ -1.68
PGS1	YCL004W	ERR2	P0CX11	437 aa		4.54	□□□□□ -1.68
PGS1	YCL004W	PRP6	P19735	899 aa	Predicted RBP	4.54	□□□□□ -1.68
PGS1	YCL004W	ECM2	P38241	364 aa	Known RBP	4.54	□□□□□ -1.68
PGS1	YCL004W	RSP5	P39940	809 aa	Known RBP	4.54	□□□□□ -1.68
PGS1	YCL004W	KRI1	P42846	591 aa	Known RBP	4.54	□□□□□ -1.68
PGS1	YCL004W	UTP22	P53254	1237 aa	Predicted RBP	4.54	□□□□□ -1.68
PGS1	YCL004W	MSH6	Q03834	1242 aa		4.54	□□□□□ -1.68
PGS1	YCL004W	COG4	Q06096	861 aa		4.54	□□□□□ -1.68
PGS1	YCL004W	PRI2	P20457	528 aa		4.53	□□□□□ -1.68
PGS1	YCL004W	THI4	P32318	326 aa		4.53	□□□□□ -1.68
PGS1	YCL004W	MNN4	P36044	1178 aa		4.53	□□□□□ -1.68
PGS1	YCL004W	REI1	P38344	393 aa	Predicted RBP	4.53	□□□□□ -1.68
PGS1	YCL004W	PEX7	P39108	375 aa		4.53	□□□□□ -1.68
PGS1	YCL004W	SNF7	P39929	240 aa	Known RBP	4.53	□□□□□ -1.68
PGS1	YCL004W	IES5	P40060	125 aa		4.53	□□□□□ -1.68
PGS1	YCL004W	VPS27	P40343	622 aa	Known RBP	4.53	□□□□□ -1.68
PGS1	YCL004W	SAM37	P50110	327 aa		4.53	□□□□□ -1.68
PGS1	YCL004W	YNL011C	P53980	444 aa		4.53	□□□□□ -1.68
PGS1	YCL004W	SSY1	Q03770	852 aa		4.53	□□□□□ -1.68
PGS1	YCL004W	FLC1	Q08967	793 aa		4.53	□□□□□ -1.68
PGS1	YCL004W	YVC1	Q12324	675 aa		4.53	□□□□□ -1.68
PGS1	YCL004W	LPX1	Q12405	387 aa	Known RBP	4.53	□□□□□ -1.68
PGS1	YCL004W	PIF1	P07271	859 aa		4.53	□□□□□ -1.69
PGS1	YCL004W	RPL8A	P17076	256 aa	Known RBP	4.53	□□□□□ -1.69
PGS1	YCL004W	TOA1	P32773	286 aa		4.53	□□□□□ -1.69
PGS1	YCL004W	EAR1	Q03212	550 aa		4.53	□□□□□ -1.69
PGS1	YCL004W	GIS1	Q03833	894 aa		4.53	□□□□□ -1.69
PGS1	YCL004W	NTG2	Q08214	380 aa		4.53	□□□□□ -1.69
PGS1	YCL004W	ADR1	P07248	1323 aa		4.52	□□□□□ -1.69
PGS1	YCL004W	SMY2	P32909	740 aa	Known RBP	4.52	□□□□□ -1.69
PGS1	YCL004W	DUR3	P33413	735 aa		4.52	□□□□□ -1.69
PGS1	YCL004W	NOC2	P39744	710 aa	Known RBP	4.52	□□□□□ -1.69
PGS1	YCL004W	SAP155	P43612	1002 aa		4.52	□□□□□ -1.69
PGS1	YCL004W	OXR1	Q08952	273 aa		4.52	□□□□□ -1.69
PGS1	YCL004W	PRE9	P23638	258 aa	Known RBP	4.51	□□□□□ -1.69
PGS1	YCL004W	MSH2	P25847	964 aa		4.51	□□□□□ -1.69
PGS1	YCL004W	NFU1	P32860	256 aa		4.51	□□□□□ -1.69
PGS1	YCL004W	ARL1	P38116	183 aa	Known RBP	4.51	□□□□□ -1.69
PGS1	YCL004W	CIC1	P38779	376 aa	Known RBP	4.51	□□□□□ -1.69
PGS1	YCL004W	YGR021W	P53212	290 aa		4.51	□□□□□ -1.69
PGS1	YCL004W	SPO20	Q04359	397 aa		4.51	□□□□□ -1.69
PGS1	YCL004W	HDA2	Q06629	674 aa		4.51	□□□□□ -1.69
PGS1	YCL004W	ALG6	Q12001	544 aa	Known RBP	4.51	□□□□□ -1.69
PGS1	YCL004W	TMA17	Q12513	150 aa		4.51	□□□□□ -1.69
PGS1	YCL004W	NFS1	P25374	497 aa		4.5	□□□□□ -1.69
PGS1	YCL004W	PRO1	P32264	428 aa		4.5	□□□□□ -1.69
PGS1	YCL004W	STE5	P32917	917 aa		4.5	□□□□□ -1.69
PGS1	YCL004W	MFT1	P33441	392 aa	Known RBP	4.5	□□□□□ -1.69
PGS1	YCL004W	NNK1	P36003	928 aa		4.5	□□□□□ -1.69
PGS1	YCL004W	FLR1	P38124	548 aa		4.5	□□□□□ -1.69
PGS1	YCL004W	RPT2	P40327	437 aa	Known RBP	4.5	□□□□□ -1.69
PGS1	YCL004W	ATG16	Q03818	150 aa		4.5	□□□□□ -1.69
PGS1	YCL004W	VMS1	Q04311	632 aa	Known RBP	4.5	□□□□□ -1.69
PGS1	YCL004W	SLX4	Q12098	748 aa		4.5	□□□□□ -1.69
PGS1	YCL004W	ATP4	P05626	244 aa		4.49	□□□□□ -1.69
PGS1	YCL004W	DPB3	P27344	201 aa		4.49	□□□□□ -1.69
PGS1	YCL004W	NOC3	Q07896	663 aa	Predicted RBP	4.49	□□□□□ -1.69
PGS1	YCL004W	MCD1	Q12158	566 aa		4.49	□□□□□ -1.69
PGS1	YCL004W	CIT1	P00890	479 aa		4.48	□□□□□ -1.69
PGS1	YCL004W	CAN1	P04817	590 aa		4.48	□□□□□ -1.69
PGS1	YCL004W	MRPS18	P42847	217 aa		4.48	□□□□□ -1.69
PGS1	YCL004W	YJR120W	P47157	116 aa		4.48	□□□□□ -1.69
PGS1	YCL004W	YGR045C	P53229	120 aa		4.48	□□□□□ -1.69
PGS1	YCL004W	ESF2	P53743	316 aa	Known RBP	4.48	□□□□□ -1.69
PGS1	YCL004W	TGL2	P54857	326 aa		4.48	□□□□□ -1.69
PGS1	YCL004W	EEB1	Q02891	456 aa		4.48	□□□□□ -1.69
PGS1	YCL004W	YPL109C	Q02981	657 aa		4.48	□□□□□ -1.69
PGS1	YCL004W	TMA7	Q3E764	64 aa	Known RBP	4.48	□□□□□ -1.69
PGS1	YCL004W	RPL8B	P29453	256 aa	Known RBP	4.48	□□□□□ -1.69
PGS1	YCL004W	GGA2	P38817	585 aa	Known RBP	4.48	□□□□□ -1.69
PGS1	YCL004W	ELA1	P53861	379 aa	Predicted RBP	4.48	□□□□□ -1.69
PGS1	YCL004W	DAL4	Q04895	635 aa		4.48	□□□□□ -1.69
PGS1	YCL004W	ESC2	Q06340	456 aa		4.48	□□□□□ -1.69
PGS1	YCL004W	ATG13	Q06628	738 aa		4.48	□□□□□ -1.69
PGS1	YCL004W	PMT7	Q06644	662 aa		4.48	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms