RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	FLR1	P38124	548 aa		6.59	□□□□□ -1.35
ATG12	YBR217W	CIT3	P43635	486 aa		6.59	□□□□□ -1.35
ATG12	YBR217W	RPS7B	P48164	190 aa	Known RBP	6.59	□□□□□ -1.35
ATG12	YBR217W	DSE4	P53753	1117 aa		6.59	□□□□□ -1.35
ATG12	YBR217W	AIM33	Q04516	312 aa		6.59	□□□□□ -1.35
ATG12	YBR217W	PSK2	Q08217	1101 aa		6.59	□□□□□ -1.35
ATG12	YBR217W	MAS2	P11914	482 aa		6.58	□□□□□ -1.36
ATG12	YBR217W	CLB5	P30283	435 aa		6.58	□□□□□ -1.36
ATG12	YBR217W	DAK1	P54838	584 aa	Known RBP	6.58	□□□□□ -1.36
ATG12	YBR217W	YPL034W	Q03083	165 aa		6.58	□□□□□ -1.36
ATG12	YBR217W	OYE2	Q03558	400 aa	Known RBP	6.58	□□□□□ -1.36
ATG12	YBR217W	CSM3	Q04659	317 aa		6.58	□□□□□ -1.36
ATG12	YBR217W	ECM30	Q06673	1274 aa		6.58	□□□□□ -1.36
ATG12	YBR217W	ELG1	Q12050	791 aa		6.58	□□□□□ -1.36
ATG12	YBR217W	DCS2	Q12123	353 aa		6.58	□□□□□ -1.36
ATG12	YBR217W	YPR117W	Q06116	2489 aa		6.57	□□□□□ -1.36
ATG12	YBR217W	CPA2	P03965	1118 aa	Known RBP	6.57	□□□□□ -1.36
ATG12	YBR217W	ESS1	P22696	170 aa		6.57	□□□□□ -1.36
ATG12	YBR217W	SAS3	P34218	831 aa		6.57	□□□□□ -1.36
ATG12	YBR217W	GPT2	P36148	743 aa		6.57	□□□□□ -1.36
ATG12	YBR217W	ISW1	P38144	1129 aa		6.57	□□□□□ -1.36
ATG12	YBR217W	RFC5	P38251	354 aa		6.57	□□□□□ -1.36
ATG12	YBR217W	GAA1	P39012	614 aa		6.57	□□□□□ -1.36
ATG12	YBR217W	NPA3	P47122	385 aa		6.57	□□□□□ -1.36
ATG12	YBR217W	RET3	P53600	189 aa		6.57	□□□□□ -1.36
ATG12	YBR217W	NAF1	P53919	492 aa	Known RBP	6.57	□□□□□ -1.36
ATG12	YBR217W	TRS120	Q04183	1289 aa		6.57	□□□□□ -1.36
ATG12	YBR217W	YLL058W	Q12198	575 aa		6.57	□□□□□ -1.36
ATG12	YBR217W	CEX1	Q12453	761 aa		6.57	□□□□□ -1.36
ATG12	YBR217W	RTP1	Q12751	981 aa		6.57	□□□□□ -1.36
ATG12	YBR217W	ILV1	P00927	576 aa	Known RBP	6.56	□□□□□ -1.36
ATG12	YBR217W	MIP1	P15801	1254 aa		6.56	□□□□□ -1.36
ATG12	YBR217W	THR4	P16120	514 aa	Known RBP	6.56	□□□□□ -1.36
ATG12	YBR217W	SRO9	P25567	434 aa	Known RBP	6.56	□□□□□ -1.36
ATG12	YBR217W	ATG32	P40458	529 aa		6.56	□□□□□ -1.36
ATG12	YBR217W	YIR014W	P40570	242 aa		6.56	□□□□□ -1.36
ATG12	YBR217W	HUL5	P53119	910 aa		6.56	□□□□□ -1.36
ATG12	YBR217W	EIS1	Q05050	843 aa	Known RBP	6.56	□□□□□ -1.36
ATG12	YBR217W	SVF1	Q05515	481 aa		6.56	□□□□□ -1.36
ATG12	YBR217W	CRD1	Q07560	283 aa		6.56	□□□□□ -1.36
ATG12	YBR217W	SLK19	Q08581	821 aa	Known RBP	6.56	□□□□□ -1.36
ATG12	YBR217W	GET3	Q12154	354 aa	Known RBP	6.56	□□□□□ -1.36
ATG12	YBR217W	GSY1	P23337	708 aa		6.55	□□□□□ -1.36
ATG12	YBR217W	TIM23	P32897	222 aa		6.55	□□□□□ -1.36
ATG12	YBR217W	TVP38	P36164	337 aa		6.55	□□□□□ -1.36
ATG12	YBR217W	STT3	P39007	718 aa	Known RBP	6.55	□□□□□ -1.36
ATG12	YBR217W	FIR1	P40020	876 aa		6.55	□□□□□ -1.36
ATG12	YBR217W	GPD2	P41911	440 aa	Known RBP	6.55	□□□□□ -1.36
ATG12	YBR217W	BRE2	P43132	505 aa		6.55	□□□□□ -1.36
ATG12	YBR217W	CLA4	P48562	842 aa		6.55	□□□□□ -1.36
ATG12	YBR217W	PIL1	P53252	339 aa	Known RBP	6.55	□□□□□ -1.36
ATG12	YBR217W	DIP5	P53388	608 aa		6.55	□□□□□ -1.36
ATG12	YBR217W	VPS72	Q03388	795 aa		6.55	□□□□□ -1.36
ATG12	YBR217W	GPI13	Q07830	1017 aa		6.55	□□□□□ -1.36
ATG12	YBR217W	YPL150W	Q12152	901 aa		6.55	□□□□□ -1.36
ATG12	YBR217W	YDR524C-B	Q3E6R4	66 aa		6.55	□□□□□ -1.36
ATG12	YBR217W	NBL1	Q3E7Y6	73 aa		6.55	□□□□□ -1.36
ATG12	YBR217W	PGK1	P00560	416 aa	Known RBP	6.54	□□□□□ -1.36
ATG12	YBR217W	TUF1	P02992	437 aa	Known RBP	6.54	□□□□□ -1.36
ATG12	YBR217W	HO	P09932	586 aa		6.54	□□□□□ -1.36
ATG12	YBR217W	SUP45	P12385	437 aa	Known RBP	6.54	□□□□□ -1.36
ATG12	YBR217W	CDC48	P25694	835 aa	Known RBP	6.54	□□□□□ -1.36
ATG12	YBR217W	ASF1	P32447	279 aa		6.54	□□□□□ -1.36
ATG12	YBR217W	PRX1	P34227	261 aa	Known RBP	6.54	□□□□□ -1.36
ATG12	YBR217W	TTI1	P36097	1038 aa		6.54	□□□□□ -1.36
ATG12	YBR217W	MAL33	P38157	468 aa		6.54	□□□□□ -1.36
ATG12	YBR217W	HMF1	P40037	129 aa	Known RBP	6.54	□□□□□ -1.36
ATG12	YBR217W	YGL081W	P53156	320 aa		6.54	□□□□□ -1.36
ATG12	YBR217W	ZPR1	P53303	486 aa	Known RBP	6.54	□□□□□ -1.36
ATG12	YBR217W	CNM67	P53865	581 aa	Known RBP	6.54	□□□□□ -1.36
ATG12	YBR217W	MFM1	Q02783	413 aa		6.54	□□□□□ -1.36
ATG12	YBR217W	MSC2	Q03455	724 aa		6.54	□□□□□ -1.36
ATG12	YBR217W	PHM6	Q05637	104 aa		6.54	□□□□□ -1.36
ATG12	YBR217W	YOR296W	Q08748	1289 aa		6.54	□□□□□ -1.36
ATG12	YBR217W	TIP41	Q12199	356 aa		6.54	□□□□□ -1.36
ATG12	YBR217W	NCR1	Q12200	1170 aa		6.54	□□□□□ -1.36
ATG12	YBR217W	PTC5	Q12511	572 aa		6.54	□□□□□ -1.36
ATG12	YBR217W	ATG11	Q12527	1178 aa		6.54	□□□□□ -1.36
ATG12	YBR217W	UBR2	Q07963	1872 aa		6.53	□□□□□ -1.36
ATG12	YBR217W	KIN82	P25341	720 aa		6.53	□□□□□ -1.36
ATG12	YBR217W	PGM1	P33401	570 aa	Known RBP	6.53	□□□□□ -1.36
ATG12	YBR217W	YEL025C	P39991	1188 aa		6.53	□□□□□ -1.36
ATG12	YBR217W	ULP2	P40537	1034 aa	Predicted RBP	6.53	□□□□□ -1.36
ATG12	YBR217W	INP51	P40559	946 aa	Known RBP	6.53	□□□□□ -1.36
ATG12	YBR217W	SAD1	P43589	448 aa		6.53	□□□□□ -1.36
ATG12	YBR217W	PSP2	P50109	593 aa	Known RBP	6.53	□□□□□ -1.36
ATG12	YBR217W	SDA1	P53313	767 aa	Known RBP	6.53	□□□□□ -1.36
ATG12	YBR217W	FMP30	Q02883	468 aa		6.53	□□□□□ -1.36
ATG12	YBR217W	HIP1	P06775	603 aa		6.52	□□□□□ -1.37
ATG12	YBR217W	HEM1	P09950	548 aa	Predicted RBP	6.52	□□□□□ -1.37
ATG12	YBR217W	BIK1	P11709	440 aa		6.52	□□□□□ -1.37
ATG12	YBR217W	CLN3	P13365	580 aa		6.52	□□□□□ -1.37
ATG12	YBR217W	SNA3	P14359	133 aa		6.52	□□□□□ -1.37
ATG12	YBR217W	RDS1	P25611	832 aa		6.52	□□□□□ -1.37
ATG12	YBR217W	SUV3	P32580	737 aa		6.52	□□□□□ -1.37
ATG12	YBR217W	DUR3	P33413	735 aa		6.52	□□□□□ -1.37
ATG12	YBR217W	YFL040W	P43562	540 aa		6.52	□□□□□ -1.37
ATG12	YBR217W	AZR1	P50080	613 aa		6.52	□□□□□ -1.37
ATG12	YBR217W	ADY4	Q05955	493 aa		6.52	□□□□□ -1.37
ATG12	YBR217W	RIF1	P29539	1916 aa		6.51	□□□□□ -1.37

Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms