RNA–Protein interactions for RNA: YAL042W

ERV46, Transcript of Protein localized to COPII-coated vesicles, yeast

Gene ERV46, Length 1,248 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ERV46	YAL042W	HSP82	P02829	709 aa	Known RBP	13.31	□□□□□ -0.28
ERV46	YAL042W	CDC6	P09119	513 aa		13.31	□□□□□ -0.28
ERV46	YAL042W	MIP1	P15801	1254 aa		13.31	□□□□□ -0.28
ERV46	YAL042W	AVT3	P36062	692 aa		13.31	□□□□□ -0.28
ERV46	YAL042W	CIT3	P43635	486 aa		13.31	□□□□□ -0.28
ERV46	YAL042W	CLA4	P48562	842 aa		13.31	□□□□□ -0.28
ERV46	YAL042W	ORC4	P54791	529 aa		13.31	□□□□□ -0.28
ERV46	YAL042W	CSM3	Q04659	317 aa		13.31	□□□□□ -0.28
ERV46	YAL042W	ORC6	P38826	435 aa		13.3	□□□□□ -0.28
ERV46	YAL042W	FMP30	Q02883	468 aa		13.3	□□□□□ -0.28
ERV46	YAL042W	ILV1	P00927	576 aa	Known RBP	13.29	□□□□□ -0.28
ERV46	YAL042W	CBP3	P21560	335 aa		13.29	□□□□□ -0.28
ERV46	YAL042W	SRO9	P25567	434 aa	Known RBP	13.29	□□□□□ -0.28
ERV46	YAL042W	UBP11	P36026	717 aa		13.29	□□□□□ -0.28
ERV46	YAL042W	YFL040W	P43562	540 aa		13.29	□□□□□ -0.28
ERV46	YAL042W	PSK2	Q08217	1101 aa		13.29	□□□□□ -0.28
ERV46	YAL042W	CEX1	Q12453	761 aa		13.29	□□□□□ -0.28
ERV46	YAL042W	RPL19A	P0CX82	189 aa	Known RBP	13.28	□□□□□ -0.28
ERV46	YAL042W	RPL19B	P0CX83	189 aa	Predicted RBP	13.28	□□□□□ -0.28
ERV46	YAL042W	WHI3	P34761	661 aa	Known RBP	13.28	□□□□□ -0.28
ERV46	YAL042W	YDR524C-B	Q3E6R4	66 aa		13.28	□□□□□ -0.28
ERV46	YAL042W	SNA3	P14359	133 aa		13.27	□□□□□ -0.29
ERV46	YAL042W	THR4	P16120	514 aa	Known RBP	13.27	□□□□□ -0.29
ERV46	YAL042W	GAA1	P39012	614 aa		13.27	□□□□□ -0.29
ERV46	YAL042W	RET3	P53600	189 aa		13.27	□□□□□ -0.29
ERV46	YAL042W	TRS120	Q04183	1289 aa		13.27	□□□□□ -0.29
ERV46	YAL042W	CRD1	Q07560	283 aa		13.27	□□□□□ -0.29
ERV46	YAL042W	GPI13	Q07830	1017 aa		13.27	□□□□□ -0.29
ERV46	YAL042W	UBR2	Q07963	1872 aa		13.27	□□□□□ -0.29
ERV46	YAL042W	ESS1	P22696	170 aa		13.26	□□□□□ -0.29
ERV46	YAL042W	GSY1	P23337	708 aa		13.26	□□□□□ -0.29
ERV46	YAL042W	HMF1	P40037	129 aa	Known RBP	13.26	□□□□□ -0.29
ERV46	YAL042W	MFM1	Q02783	413 aa		13.26	□□□□□ -0.29
ERV46	YAL042W	MSC2	Q03455	724 aa		13.26	□□□□□ -0.29
ERV46	YAL042W	VPS20	Q04272	221 aa		13.26	□□□□□ -0.29
ERV46	YAL042W	GET3	Q12154	354 aa	Known RBP	13.26	□□□□□ -0.29
ERV46	YAL042W	ATG11	Q12527	1178 aa		13.26	□□□□□ -0.29
ERV46	YAL042W	PGK1	P00560	416 aa	Known RBP	13.25	□□□□□ -0.29
ERV46	YAL042W	TVP38	P36164	337 aa		13.25	□□□□□ -0.29
ERV46	YAL042W	RFC5	P38251	354 aa		13.25	□□□□□ -0.29
ERV46	YAL042W	ZPR1	P53303	486 aa	Known RBP	13.25	□□□□□ -0.29
ERV46	YAL042W	ELG1	Q12050	791 aa		13.25	□□□□□ -0.29
ERV46	YAL042W	RIF1	P29539	1916 aa		13.25	□□□□□ -0.29
ERV46	YAL042W	PSP2	P50109	593 aa	Known RBP	13.24	□□□□□ -0.29
ERV46	YAL042W	CNM67	P53865	581 aa	Known RBP	13.24	□□□□□ -0.29
ERV46	YAL042W	PHM6	Q05637	104 aa		13.24	□□□□□ -0.29
ERV46	YAL042W	SLK19	Q08581	821 aa	Known RBP	13.24	□□□□□ -0.29
ERV46	YAL042W	NBL1	Q3E7Y6	73 aa		13.24	□□□□□ -0.29
ERV46	YAL042W	CPA2	P03965	1118 aa	Known RBP	13.23	□□□□□ -0.29
ERV46	YAL042W	HEM1	P09950	548 aa	Predicted RBP	13.23	□□□□□ -0.29
ERV46	YAL042W	CDC48	P25694	835 aa	Known RBP	13.23	□□□□□ -0.29
ERV46	YAL042W	ASF1	P32447	279 aa		13.23	□□□□□ -0.29
ERV46	YAL042W	PGM1	P33401	570 aa	Known RBP	13.23	□□□□□ -0.29
ERV46	YAL042W	DUR3	P33413	735 aa		13.23	□□□□□ -0.29
ERV46	YAL042W	TTI1	P36097	1038 aa		13.23	□□□□□ -0.29
ERV46	YAL042W	STT3	P39007	718 aa	Known RBP	13.23	□□□□□ -0.29
ERV46	YAL042W	ATG32	P40458	529 aa		13.23	□□□□□ -0.29
ERV46	YAL042W	GPD2	P41911	440 aa	Known RBP	13.23	□□□□□ -0.29
ERV46	YAL042W	DCS2	Q12123	353 aa		13.23	□□□□□ -0.29
ERV46	YAL042W	TIP41	Q12199	356 aa		13.23	□□□□□ -0.29
ERV46	YAL042W	YEL025C	P39991	1188 aa		13.22	□□□□□ -0.29
ERV46	YAL042W	SGM1	P47166	707 aa		13.22	□□□□□ -0.29
ERV46	YAL042W	PIL1	P53252	339 aa	Known RBP	13.22	□□□□□ -0.29
ERV46	YAL042W	DIP5	P53388	608 aa		13.22	□□□□□ -0.29
ERV46	YAL042W	KIN82	P25341	720 aa		13.21	□□□□□ -0.29
ERV46	YAL042W	INP51	P40559	946 aa	Known RBP	13.21	□□□□□ -0.29
ERV46	YAL042W	NPA3	P47122	385 aa		13.21	□□□□□ -0.29
ERV46	YAL042W	AZR1	P50080	613 aa		13.21	□□□□□ -0.29
ERV46	YAL042W	YLH47	Q06493	454 aa		13.21	□□□□□ -0.29
ERV46	YAL042W	LDB19	Q12502	818 aa		13.21	□□□□□ -0.29
ERV46	YAL042W	TUF1	P02992	437 aa	Known RBP	13.2	□□□□□ -0.3
ERV46	YAL042W	HIP1	P06775	603 aa		13.2	□□□□□ -0.3
ERV46	YAL042W	SUP45	P12385	437 aa	Known RBP	13.2	□□□□□ -0.3
ERV46	YAL042W	CLN3	P13365	580 aa		13.2	□□□□□ -0.3
ERV46	YAL042W	BRE2	P43132	505 aa		13.2	□□□□□ -0.3
ERV46	YAL042W	EIS1	Q05050	843 aa	Known RBP	13.2	□□□□□ -0.3
ERV46	YAL042W	YOR296W	Q08748	1289 aa		13.2	□□□□□ -0.3
ERV46	YAL042W	POT1	P27796	417 aa	Known RBP RIP-Chip data	13.19	□□□□□ -0.3	not detected
ERV46	YAL042W	IRE1	P32361	1115 aa		13.19	□□□□□ -0.3
ERV46	YAL042W	SUV3	P32580	737 aa		13.19	□□□□□ -0.3
ERV46	YAL042W	GRS1	P38088	690 aa	Known RBP	13.19	□□□□□ -0.3
ERV46	YAL042W	MDR1	P53258	950 aa		13.19	□□□□□ -0.3
ERV46	YAL042W	SDA1	P53313	767 aa	Known RBP	13.19	□□□□□ -0.3
ERV46	YAL042W	YNL115C	P53925	644 aa		13.19	□□□□□ -0.3
ERV46	YAL042W	YPL150W	Q12152	901 aa		13.19	□□□□□ -0.3
ERV46	YAL042W	AFT1	P22149	690 aa		13.18	□□□□□ -0.3
ERV46	YAL042W	SMY2	P32909	740 aa	Known RBP	13.18	□□□□□ -0.3
ERV46	YAL042W	YML020W	Q03722	664 aa		13.18	□□□□□ -0.3
ERV46	YAL042W	PRX1	P34227	261 aa	Known RBP	13.17	□□□□□ -0.3
ERV46	YAL042W	YKR023W	P36119	530 aa	Known RBP	13.17	□□□□□ -0.3
ERV46	YAL042W	PGA2	P53903	129 aa		13.17	□□□□□ -0.3
ERV46	YAL042W	EAR1	Q03212	550 aa		13.17	□□□□□ -0.3
ERV46	YAL042W	NCR1	Q12200	1170 aa		13.17	□□□□□ -0.3
ERV46	YAL042W	DID4	P36108	232 aa		13.16	□□□□□ -0.3
ERV46	YAL042W	ALD5	P40047	520 aa	Known RBP	13.16	□□□□□ -0.3
ERV46	YAL042W	SAD1	P43589	448 aa		13.16	□□□□□ -0.3
ERV46	YAL042W	PEX14	P53112	341 aa		13.16	□□□□□ -0.3
ERV46	YAL042W	YGL081W	P53156	320 aa		13.16	□□□□□ -0.3
ERV46	YAL042W	AHC1	Q12433	566 aa		13.16	□□□□□ -0.3
ERV46	YAL042W	PTC5	Q12511	572 aa		13.16	□□□□□ -0.3

Retrieved 100 of 5,963 RNA–protein pairs in 42 ms