RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 TFCP2L1Q9NZI6 479 aa23.11■■□□□ 1.29
PHGDH-227ENST00000641811 SLC52A2Q9HAB3 445 aa23.1■■□□□ 1.29
PHGDH-227ENST00000641811 C5P01031 1676 aa23.09■■□□□ 1.29
PHGDH-227ENST00000641811 GNAT3A8MTJ3 354 aa23.09■■□□□ 1.29
PHGDH-227ENST00000641811 ITPK1Q13572 414 aa23.09■■□□□ 1.29
PHGDH-227ENST00000641811 RBM42Q9BTD8 480 aaKnown RBP23.09■■□□□ 1.29
PHGDH-227ENST00000641811 MAP3K5Q99683 1374 aa23.09■■□□□ 1.29
PHGDH-227ENST00000641811 PNPLA7Q6ZV29 1317 aa23.08■■□□□ 1.29
PHGDH-227ENST00000641811 ATP6V1AP38606 617 aa23.08■■□□□ 1.29
PHGDH-227ENST00000641811 SLC4A9Q96Q91 983 aa23.08■■□□□ 1.29
PHGDH-227ENST00000641811 SPON1Q9HCB6 807 aa23.08■■□□□ 1.29
PHGDH-227ENST00000641811 TAF1LQ8IZX4 1826 aa23.08■■□□□ 1.28
PHGDH-227ENST00000641811 LINC00116Q8NCU8 138 aa23.07■■□□□ 1.28
PHGDH-227ENST00000641811 IL17REQ8NFR9 667 aa23.07■■□□□ 1.28
PHGDH-227ENST00000641811 ATF5Q9Y2D1 282 aaPredicted RBP23.07■■□□□ 1.28
PHGDH-227ENST00000641811 TUBGCP6Q96RT7 1819 aa23.07■■□□□ 1.28
PHGDH-227ENST00000641811 ADAMTS7Q9UKP4 1686 aa23.06■■□□□ 1.28
PHGDH-227ENST00000641811 PTCD1O75127 700 aaKnown RBP23.06■■□□□ 1.28
PHGDH-227ENST00000641811 VIRMAQ69YN4 1812 aaKnown RBP23.05■■□□□ 1.28
PHGDH-227ENST00000641811 MRC1P22897 1456 aa23.05■■□□□ 1.28
PHGDH-227ENST00000641811 SLC39A6Q13433 755 aa23.04■■□□□ 1.28
PHGDH-227ENST00000641811 SMIM5Q71RC9 77 aa23.04■■□□□ 1.28
PHGDH-227ENST00000641811 C4BP0C0L5 1744 aa23.04■■□□□ 1.28
PHGDH-227ENST00000641811 AMIGO3Q86WK7 504 aa23.03■■□□□ 1.28
PHGDH-227ENST00000641811 PLEKHF1Q96S99 279 aa23.03■■□□□ 1.28
PHGDH-227ENST00000641811 COL23A1Q86Y22 540 aaPredicted RBP23.02■■□□□ 1.28
PHGDH-227ENST00000641811 AK7Q96M32 723 aa23.02■■□□□ 1.28
PHGDH-227ENST00000641811 QSER1Q2KHR3 1735 aa23.02■■□□□ 1.28
PHGDH-227ENST00000641811 MSH5O43196 834 aa23.01■■□□□ 1.27
PHGDH-227ENST00000641811 TEFQ10587 303 aa23.01■■□□□ 1.27
PHGDH-227ENST00000641811 MTFR1LQ9H019 292 aa23.01■■□□□ 1.27
PHGDH-227ENST00000641811 PTGER2P43116 358 aa23■■□□□ 1.27
PHGDH-227ENST00000641811 MCM10Q7L590 875 aa23■■□□□ 1.27
PHGDH-227ENST00000641811 HMGB2P26583 209 aaKnown RBP22.99■■□□□ 1.27
PHGDH-227ENST00000641811 DCTN1Q14203 1278 aa22.99■■□□□ 1.27
PHGDH-227ENST00000641811 CEMIPQ8WUJ3 1361 aa22.99■■□□□ 1.27
PHGDH-227ENST00000641811 PHF14O94880 888 aa22.98■■□□□ 1.27
PHGDH-227ENST00000641811 NEFMP07197 916 aa22.98■■□□□ 1.27
PHGDH-227ENST00000641811 PPP1R1BQ9UD71 204 aaPredicted RBP22.98■■□□□ 1.27
PHGDH-227ENST00000641811 ZNF831Q5JPB2 1677 aa22.97■■□□□ 1.27
PHGDH-227ENST00000641811 GNPATO15228 680 aa22.97■■□□□ 1.27
PHGDH-227ENST00000641811 RTF1Q92541 710 aaKnown RBP22.97■■□□□ 1.27
PHGDH-227ENST00000641811 SLC16A10Q8TF71 515 aa22.96■■□□□ 1.27
PHGDH-227ENST00000641811 SGIP1Q9BQI5 828 aa22.96■■□□□ 1.27
PHGDH-227ENST00000641811 PNNQ9H307 717 aaKnown RBP22.96■■□□□ 1.27
PHGDH-227ENST00000641811 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.95■■□□□ 1.26
PHGDH-227ENST00000641811 NFE2L2Q16236 605 aa22.95■■□□□ 1.26
PHGDH-227ENST00000641811 UBR3Q6ZT12 1888 aa22.95■■□□□ 1.26
PHGDH-227ENST00000641811 KCPQ6ZWJ8 1503 aa22.95■■□□□ 1.26
PHGDH-227ENST00000641811 MAPK8IP3Q9UPT6 1336 aa22.95■■□□□ 1.26
PHGDH-227ENST00000641811 SIPA1L3O60292 1781 aaPredicted RBP22.94■■□□□ 1.26
PHGDH-227ENST00000641811 WDR43Q15061 677 aaKnown RBP eCLIP22.94■■□□□ 1.26
PHGDH-227ENST00000641811 DNAJC10Q8IXB1 793 aa22.94■■□□□ 1.26
PHGDH-227ENST00000641811 CCDC146Q8IYE0 955 aa22.94■■□□□ 1.26
PHGDH-227ENST00000641811 FLAD1Q8NFF5 587 aa22.94■■□□□ 1.26
PHGDH-227ENST00000641811 COL5A3P25940 1745 aaPredicted RBP22.94■■□□□ 1.26
PHGDH-227ENST00000641811 TJP1Q07157 1748 aa22.94■■□□□ 1.26
PHGDH-227ENST00000641811 HTATSF1O43719 755 aaKnown RBP22.93■■□□□ 1.26
PHGDH-227ENST00000641811 MSL1Q68DK7 614 aa22.93■■□□□ 1.26
PHGDH-227ENST00000641811 TTC5Q8N0Z6 440 aa22.93■■□□□ 1.26
PHGDH-227ENST00000641811 ADAMTS8Q9UP79 889 aa22.93■■□□□ 1.26
PHGDH-227ENST00000641811 CNTNAP4Q9C0A0 1308 aa22.92■■□□□ 1.26
PHGDH-227ENST00000641811 KCNQ3O43525 872 aa22.92■■□□□ 1.26
PHGDH-227ENST00000641811 SSFA2P28290 1259 aa22.92■■□□□ 1.26
PHGDH-227ENST00000641811 CRKLP46109 303 aaKnown RBP22.92■■□□□ 1.26
PHGDH-227ENST00000641811 CCDC184Q52MB2 194 aa22.92■■□□□ 1.26
PHGDH-227ENST00000641811 RC3H1Q5TC82 1133 aaKnown RBP22.92■■□□□ 1.26
PHGDH-227ENST00000641811 ZNF790Q6PG37 636 aa22.92■■□□□ 1.26
PHGDH-227ENST00000641811 DLG5Q8TDM6 1919 aa22.91■■□□□ 1.26
PHGDH-227ENST00000641811 BTBD11A6QL63 1104 aa22.91■■□□□ 1.26
PHGDH-227ENST00000641811 ZNF496Q96IT1 587 aaPredicted RBP22.91■■□□□ 1.26
PHGDH-227ENST00000641811 THUMPD2Q9BTF0 503 aaKnown RBP22.9■■□□□ 1.26
PHGDH-227ENST00000641811 RTCBQ9Y3I0 505 aaKnown RBP22.9■■□□□ 1.26
PHGDH-227ENST00000641811 UBR2Q8IWV8 1755 aa22.9■■□□□ 1.26
PHGDH-227ENST00000641811 MYH14Q7Z406 1995 aaKnown RBP22.89■■□□□ 1.26
PHGDH-227ENST00000641811 RPS6KA4O75676 772 aa22.89■■□□□ 1.25
PHGDH-227ENST00000641811 ARXQ96QS3 562 aa22.89■■□□□ 1.25
PHGDH-227ENST00000641811 CICQ96RK0 1608 aaPredicted RBP22.89■■□□□ 1.25
PHGDH-227ENST00000641811 ANP32CO43423 234 aa22.88■■□□□ 1.25
PHGDH-227ENST00000641811 CYP19A1P11511 503 aaPredicted RBP22.88■■□□□ 1.25
PHGDH-227ENST00000641811 INTS5Q6P9B9 1019 aaKnown RBP22.88■■□□□ 1.25
PHGDH-227ENST00000641811 RRP7AQ9Y3A4 280 aaKnown RBP22.88■■□□□ 1.25
PHGDH-227ENST00000641811 TMPOP42166 694 aaKnown RBP22.87■■□□□ 1.25
PHGDH-227ENST00000641811 RIPK4P57078 832 aa22.87■■□□□ 1.25
PHGDH-227ENST00000641811 TRAPPC3LQ5T215 181 aa22.87■■□□□ 1.25
PHGDH-227ENST00000641811 VSIG10Q8N0Z9 540 aa22.87■■□□□ 1.25
PHGDH-227ENST00000641811 MIS18AQ9NYP9 233 aa22.87■■□□□ 1.25
PHGDH-227ENST00000641811 COL24A1Q17RW2 1714 aa22.86■■□□□ 1.25
PHGDH-227ENST00000641811 POLD1P28340 1107 aa22.86■■□□□ 1.25
PHGDH-227ENST00000641811 TAF7Q15545 349 aaPredicted RBP22.86■■□□□ 1.25
PHGDH-227ENST00000641811 ARHGEF1Q92888 912 aaKnown RBP22.86■■□□□ 1.25
PHGDH-227ENST00000641811 RUNDC1Q96C34 613 aa22.86■■□□□ 1.25
PHGDH-227ENST00000641811 CCDC87Q9NVE4 849 aa22.86■■□□□ 1.25
PHGDH-227ENST00000641811 HEG1Q9ULI3 1381 aa22.86■■□□□ 1.25
PHGDH-227ENST00000641811 NEUROD2Q15784 382 aa22.85■■□□□ 1.25
PHGDH-227ENST00000641811 FMNL2Q96PY5 1086 aa22.85■■□□□ 1.25
PHGDH-227ENST00000641811 FHDC1Q9C0D6 1143 aaPredicted RBP22.85■■□□□ 1.25
PHGDH-227ENST00000641811 ADRA2BP18089 450 aa22.82■■□□□ 1.24
PHGDH-227ENST00000641811 ZBTB1Q9Y2K1 713 aa22.82■■□□□ 1.24
PHGDH-227ENST00000641811 PRAMEF22A3QJZ6 481 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms