RNA–Protein interactions for RNA: ENST00000641458.1

RGPD1-206, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 BASIC

Gene RGPD1, Length 5,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-206ENST00000641458 KIF13BQ9NQT8 1826 aa8.09□□□□□ -1.11
RGPD1-206ENST00000641458 HMGB2P26583 209 aaKnown RBP8.09□□□□□ -1.11
RGPD1-206ENST00000641458 XPCQ01831 940 aaPredicted RBP8.09□□□□□ -1.11
RGPD1-206ENST00000641458 MYH3P11055 1940 aa8.09□□□□□ -1.11
RGPD1-206ENST00000641458 RARSP54136 660 aaKnown RBP8.09□□□□□ -1.11
RGPD1-206ENST00000641458 LARP1Q6PKG0 1096 aaKnown RBP8.09□□□□□ -1.11
RGPD1-206ENST00000641458 ABCC4O15439 1325 aa8.09□□□□□ -1.11
RGPD1-206ENST00000641458 AFDNP55196 1824 aaKnown RBP8.08□□□□□ -1.12
RGPD1-206ENST00000641458 EIF4A1P60842 406 aaKnown RBP8.08□□□□□ -1.12
RGPD1-206ENST00000641458 ZCRB1Q8TBF4 217 aaKnown RBP8.08□□□□□ -1.12
RGPD1-206ENST00000641458 PTPRCP08575 1304 aa8.08□□□□□ -1.12
RGPD1-206ENST00000641458 CABLES1Q8TDN4 633 aa8.08□□□□□ -1.12
RGPD1-206ENST00000641458 MBIPQ9NS73 344 aa8.08□□□□□ -1.12
RGPD1-206ENST00000641458 BTG4Q9NY30 223 aa8.08□□□□□ -1.12
RGPD1-206ENST00000641458 ZC3H6P61129 1189 aaKnown RBP8.07□□□□□ -1.12
RGPD1-206ENST00000641458 U2SURPO15042 1029 aaKnown RBP8.07□□□□□ -1.12
RGPD1-206ENST00000641458 TNNT2P45379 298 aaPredicted RBP8.07□□□□□ -1.12
RGPD1-206ENST00000641458 NEFMP07197 916 aa8.06□□□□□ -1.12
RGPD1-206ENST00000641458 ARAP2Q8WZ64 1704 aa8.06□□□□□ -1.12
RGPD1-206ENST00000641458 UTYO14607 1347 aa8.06□□□□□ -1.12
RGPD1-206ENST00000641458 RAPGEF4Q8WZA2 1011 aa8.06□□□□□ -1.12
RGPD1-206ENST00000641458 DLEC1Q9Y238 1755 aa8.06□□□□□ -1.12
RGPD1-206ENST00000641458 KIF16BQ96L93 1317 aa8.06□□□□□ -1.12
RGPD1-206ENST00000641458 HMOX1P09601 288 aa8.06□□□□□ -1.12
RGPD1-206ENST00000641458 TRPC5Q9UL62 973 aaPredicted RBP8.06□□□□□ -1.12
RGPD1-206ENST00000641458 NUTM2GQ5VZR2 741 aa8.06□□□□□ -1.12
RGPD1-206ENST00000641458 CDCA7LQ96GN5 454 aa8.06□□□□□ -1.12
RGPD1-206ENST00000641458 CCDC146Q8IYE0 955 aa8.05□□□□□ -1.12
RGPD1-206ENST00000641458 MRPL50Q8N5N7 158 aaKnown RBP8.05□□□□□ -1.12
RGPD1-206ENST00000641458 RCAN3Q9UKA8 241 aa8.05□□□□□ -1.12
RGPD1-206ENST00000641458 LRRC37AA6NMS7 1700 aa8.05□□□□□ -1.12
RGPD1-206ENST00000641458 GJD4Q96KN9 370 aaPredicted RBP8.05□□□□□ -1.12
RGPD1-206ENST00000641458 MS4A1P11836 297 aa8.05□□□□□ -1.12
RGPD1-206ENST00000641458 RRP1P56182 461 aaKnown RBP8.05□□□□□ -1.12
RGPD1-206ENST00000641458 INTS3Q68E01 1043 aaKnown RBP8.04□□□□□ -1.12
RGPD1-206ENST00000641458 ZNF772Q68DY9 489 aaPredicted RBP8.04□□□□□ -1.12
RGPD1-206ENST00000641458 ZNF530Q6P9A1 599 aaPredicted RBP8.04□□□□□ -1.12
RGPD1-206ENST00000641458 GIGYF1O75420 1035 aaPredicted RBP8.04□□□□□ -1.12
RGPD1-206ENST00000641458 CHRNA2Q15822 529 aa8.03□□□□□ -1.12
RGPD1-206ENST00000641458 TEX13AQ9BXU3 409 aaPredicted RBP8.03□□□□□ -1.12
RGPD1-206ENST00000641458 PDIA6Q15084 440 aa8.03□□□□□ -1.12
RGPD1-206ENST00000641458 ZNF790Q6PG37 636 aa8.02□□□□□ -1.12
RGPD1-206ENST00000641458 KIAA1551Q9HCM1 1747 aa8.02□□□□□ -1.13
RGPD1-206ENST00000641458 KAT6BQ8WYB5 2073 aa8.02□□□□□ -1.13
RGPD1-206ENST00000641458 RC3H1Q5TC82 1133 aaKnown RBP8.02□□□□□ -1.13
RGPD1-206ENST00000641458 MARCH10Q8NA82 808 aaPredicted RBP8.02□□□□□ -1.13
RGPD1-206ENST00000641458 LGR6Q9HBX8 967 aa8.02□□□□□ -1.13
RGPD1-206ENST00000641458 AFF2P51816 1311 aa8.02□□□□□ -1.13
RGPD1-206ENST00000641458 TRIM28Q13263 835 aaKnown RBP8.02□□□□□ -1.13
RGPD1-206ENST00000641458 TOM1L2Q6ZVM7 507 aa8.02□□□□□ -1.13
RGPD1-206ENST00000641458 C1orf141Q5JVX7 400 aa8.01□□□□□ -1.13
RGPD1-206ENST00000641458 CNTNAP4Q9C0A0 1308 aa8.01□□□□□ -1.13
RGPD1-206ENST00000641458 LTBP1Q14766 1721 aa8.01□□□□□ -1.13
RGPD1-206ENST00000641458 C8orf58Q8NAV2 365 aa8.01□□□□□ -1.13
RGPD1-206ENST00000641458 RTF1Q92541 710 aaKnown RBP8.01□□□□□ -1.13
RGPD1-206ENST00000641458 NLRP2Q9NX02 1062 aa8.01□□□□□ -1.13
RGPD1-206ENST00000641458 RGS17Q9UGC6 210 aaPredicted RBP8.01□□□□□ -1.13
RGPD1-206ENST00000641458 RBM6P78332 1123 aaKnown RBP8.01□□□□□ -1.13
RGPD1-206ENST00000641458 EXOSC9Q06265 439 aaKnown RBP8.01□□□□□ -1.13
RGPD1-206ENST00000641458 DDX21Q9NR30 783 aaKnown RBP eCLIP8□□□□□ -1.13
RGPD1-206ENST00000641458 USP21Q9UK80 565 aa8□□□□□ -1.13
RGPD1-206ENST00000641458 EXOC5O00471 708 aa8□□□□□ -1.13
RGPD1-206ENST00000641458 TWISTNBQ3B726 338 aaPredicted RBP8□□□□□ -1.13
RGPD1-206ENST00000641458 SSH1Q8WYL5 1049 aa8□□□□□ -1.13
RGPD1-206ENST00000641458 SPEF2Q9C093 1822 aa7.99□□□□□ -1.13
RGPD1-206ENST00000641458 PPM1GO15355 546 aaPredicted RBP7.99□□□□□ -1.13
RGPD1-206ENST00000641458 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.99□□□□□ -1.13
RGPD1-206ENST00000641458 KDM2BQ8NHM5 1336 aa7.99□□□□□ -1.13
RGPD1-206ENST00000641458 PLSCR1O15162 318 aa7.99□□□□□ -1.13
RGPD1-206ENST00000641458 MCM10Q7L590 875 aa7.99□□□□□ -1.13
RGPD1-206ENST00000641458 SMARCC1Q92922 1105 aaPredicted RBP7.99□□□□□ -1.13
RGPD1-206ENST00000641458 MTX1Q13505 466 aa7.99□□□□□ -1.13
RGPD1-206ENST00000641458 ATF7IPQ6VMQ6 1270 aa7.99□□□□□ -1.13
RGPD1-206ENST00000641458 ADCY9O60503 1353 aa7.99□□□□□ -1.13
RGPD1-206ENST00000641458 USHBP1Q8N6Y0 703 aa7.99□□□□□ -1.13
RGPD1-206ENST00000641458 CHMP4BQ9H444 224 aaKnown RBP7.99□□□□□ -1.13
RGPD1-206ENST00000641458 ATG3Q9NT62 314 aa7.99□□□□□ -1.13
RGPD1-206ENST00000641458 ZNF646O15015 1829 aaPredicted RBP7.98□□□□□ -1.13
RGPD1-206ENST00000641458 CCDC30Q5VVM6 783 aa7.98□□□□□ -1.13
RGPD1-206ENST00000641458 FMNL2Q96PY5 1086 aa7.98□□□□□ -1.13
RGPD1-206ENST00000641458 API5Q9BZZ5 524 aaKnown RBP7.98□□□□□ -1.13
RGPD1-206ENST00000641458 SNRPA1P09661 255 aaKnown RBP7.98□□□□□ -1.13
RGPD1-206ENST00000641458 DDB1Q16531 1140 aa7.98□□□□□ -1.13
RGPD1-206ENST00000641458 LMOD2Q6P5Q4 547 aa7.98□□□□□ -1.13
RGPD1-206ENST00000641458 RTL9Q8NET4 1388 aa7.98□□□□□ -1.13
RGPD1-206ENST00000641458 BRCA1P38398 1863 aaKnown RBP7.98□□□□□ -1.13
RGPD1-206ENST00000641458 IPO8O15397 1037 aaKnown RBP7.98□□□□□ -1.13
RGPD1-206ENST00000641458 TSPYL6Q8N831 410 aa7.98□□□□□ -1.13
RGPD1-206ENST00000641458 HYPKQ9NX55 129 aa7.98□□□□□ -1.13
RGPD1-206ENST00000641458 BCL11BQ9C0K0 894 aaPredicted RBP7.97□□□□□ -1.13
RGPD1-206ENST00000641458 DBF4Q9UBU7 674 aaPredicted RBP7.97□□□□□ -1.13
RGPD1-206ENST00000641458 EVA1CP58658 441 aa7.97□□□□□ -1.13
RGPD1-206ENST00000641458 PIGBQ92521 554 aa7.97□□□□□ -1.13
RGPD1-206ENST00000641458 BTBD11A6QL63 1104 aa7.97□□□□□ -1.13
RGPD1-206ENST00000641458 ERVV-1B6SEH8 477 aa7.97□□□□□ -1.13
RGPD1-206ENST00000641458 HDAC1Q13547 482 aaPredicted RBP7.97□□□□□ -1.13
RGPD1-206ENST00000641458 TSPYL4Q9UJ04 414 aa7.97□□□□□ -1.13
RGPD1-206ENST00000641458 RRP7AQ9Y3A4 280 aaKnown RBP7.97□□□□□ -1.13
RGPD1-206ENST00000641458 ALDH1L1O75891 902 aa7.96□□□□□ -1.13
RGPD1-206ENST00000641458 ZKSCAN2Q63HK3 967 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 688.2 ms