RNA–Protein interactions for RNA: ENST00000640939.1

GRAMD1B-217, Transcript of GRAM domain containing 1B, humanhuman

TSL 5 BASIC

Gene GRAMD1B, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-217ENST00000640939 RSPH6AQ9H0K4 717 aa30.12■■■□□ 2.41
GRAMD1B-217ENST00000640939 PPP1R1BQ9UD71 204 aaPredicted RBP30.12■■■□□ 2.41
GRAMD1B-217ENST00000640939 C4BP0C0L5 1744 aa30.12■■■□□ 2.41
GRAMD1B-217ENST00000640939 VIRMAQ69YN4 1812 aaKnown RBP30.12■■■□□ 2.41
GRAMD1B-217ENST00000640939 RNMTO43148 476 aaKnown RBP30.11■■■□□ 2.41
GRAMD1B-217ENST00000640939 ATP6V1AP38606 617 aa30.11■■■□□ 2.41
GRAMD1B-217ENST00000640939 PTGER2P43116 358 aa30.1■■■□□ 2.41
GRAMD1B-217ENST00000640939 ITPK1Q13572 414 aa30.1■■■□□ 2.41
GRAMD1B-217ENST00000640939 LINC00116Q8NCU8 138 aa30.1■■■□□ 2.41
GRAMD1B-217ENST00000640939 RBM42Q9BTD8 480 aaKnown RBP30.1■■■□□ 2.41
GRAMD1B-217ENST00000640939 PHACTR3Q96KR7 559 aa30.09■■■□□ 2.41
GRAMD1B-217ENST00000640939 RALBP1Q15311 655 aa30.08■■■□□ 2.41
GRAMD1B-217ENST00000640939 MSH5O43196 834 aa30.07■■■□□ 2.4
GRAMD1B-217ENST00000640939 HMGB2P26583 209 aaKnown RBP30.07■■■□□ 2.4
GRAMD1B-217ENST00000640939 COL23A1Q86Y22 540 aaPredicted RBP30.07■■■□□ 2.4
GRAMD1B-217ENST00000640939 GAS2L2Q8NHY3 880 aa30.07■■■□□ 2.4
GRAMD1B-217ENST00000640939 AK7Q96M32 723 aa30.07■■■□□ 2.4
GRAMD1B-217ENST00000640939 SLC4A9Q96Q91 983 aa30.07■■■□□ 2.4
GRAMD1B-217ENST00000640939 SLC52A2Q9HAB3 445 aa30.07■■■□□ 2.4
GRAMD1B-217ENST00000640939 ADAMTS7Q9UKP4 1686 aa30.06■■■□□ 2.4
GRAMD1B-217ENST00000640939 MRC1P22897 1456 aa30.05■■■□□ 2.4
GRAMD1B-217ENST00000640939 MAP3K5Q99683 1374 aa30.04■■■□□ 2.4
GRAMD1B-217ENST00000640939 PTCD1O75127 700 aaKnown RBP30.04■■■□□ 2.4
GRAMD1B-217ENST00000640939 SMIM5Q71RC9 77 aa30.04■■■□□ 2.4
GRAMD1B-217ENST00000640939 SLC16A10Q8TF71 515 aa30.04■■■□□ 2.4
GRAMD1B-217ENST00000640939 GNAT3A8MTJ3 354 aa30.03■■■□□ 2.4
GRAMD1B-217ENST00000640939 FCHSD2O94868 740 aa30.03■■■□□ 2.4
GRAMD1B-217ENST00000640939 AMIGO3Q86WK7 504 aa30.03■■■□□ 2.4
GRAMD1B-217ENST00000640939 SGIP1Q9BQI5 828 aa30.03■■■□□ 2.4
GRAMD1B-217ENST00000640939 UBR3Q6ZT12 1888 aa30.02■■■□□ 2.4
GRAMD1B-217ENST00000640939 ZNF831Q5JPB2 1677 aa30.01■■■□□ 2.39
GRAMD1B-217ENST00000640939 PHF14O94880 888 aa30■■■□□ 2.39
GRAMD1B-217ENST00000640939 IL17REQ8NFR9 667 aa30■■■□□ 2.39
GRAMD1B-217ENST00000640939 SLC39A6Q13433 755 aa29.99■■■□□ 2.39
GRAMD1B-217ENST00000640939 GNPATO15228 680 aa29.98■■■□□ 2.39
GRAMD1B-217ENST00000640939 FLAD1Q8NFF5 587 aa29.98■■■□□ 2.39
GRAMD1B-217ENST00000640939 COL5A3P25940 1745 aaPredicted RBP29.98■■■□□ 2.39
GRAMD1B-217ENST00000640939 MYBBP1AQ9BQG0 1328 aaKnown RBP29.97■■■□□ 2.39
GRAMD1B-217ENST00000640939 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.96■■■□□ 2.39
GRAMD1B-217ENST00000640939 MSL1Q68DK7 614 aa29.96■■■□□ 2.39
GRAMD1B-217ENST00000640939 COL24A1Q17RW2 1714 aa29.96■■■□□ 2.39
GRAMD1B-217ENST00000640939 ARXQ96QS3 562 aa29.95■■■□□ 2.39
GRAMD1B-217ENST00000640939 TJP1Q07157 1748 aa29.94■■■□□ 2.38
GRAMD1B-217ENST00000640939 TEFQ10587 303 aa29.94■■■□□ 2.38
GRAMD1B-217ENST00000640939 SSFA2P28290 1259 aa29.93■■■□□ 2.38
GRAMD1B-217ENST00000640939 POLD1P28340 1107 aa29.93■■■□□ 2.38
GRAMD1B-217ENST00000640939 FHDC1Q9C0D6 1143 aaPredicted RBP29.92■■■□□ 2.38
GRAMD1B-217ENST00000640939 KCPQ6ZWJ8 1503 aa29.91■■■□□ 2.38
GRAMD1B-217ENST00000640939 SIPA1L3O60292 1781 aaPredicted RBP29.91■■■□□ 2.38
GRAMD1B-217ENST00000640939 CNTNAP4Q9C0A0 1308 aa29.91■■■□□ 2.38
GRAMD1B-217ENST00000640939 CEMIPQ8WUJ3 1361 aa29.9■■■□□ 2.38
GRAMD1B-217ENST00000640939 MYH14Q7Z406 1995 aaKnown RBP29.9■■■□□ 2.38
GRAMD1B-217ENST00000640939 RC3H1Q5TC82 1133 aaKnown RBP29.9■■■□□ 2.38
GRAMD1B-217ENST00000640939 PRKRIP1Q9H875 184 aaPredicted RBP29.9■■■□□ 2.38
GRAMD1B-217ENST00000640939 ZNF316A6NFI3 1004 aaPredicted RBP29.89■■■□□ 2.38
GRAMD1B-217ENST00000640939 MCM10Q7L590 875 aa29.89■■■□□ 2.38
GRAMD1B-217ENST00000640939 PLEKHF1Q96S99 279 aa29.89■■■□□ 2.38
GRAMD1B-217ENST00000640939 RTCBQ9Y3I0 505 aaKnown RBP29.89■■■□□ 2.38
GRAMD1B-217ENST00000640939 CICQ96RK0 1608 aaPredicted RBP29.89■■■□□ 2.37
GRAMD1B-217ENST00000640939 NEFMP07197 916 aa29.88■■■□□ 2.37
GRAMD1B-217ENST00000640939 DNAJC10Q8IXB1 793 aa29.88■■■□□ 2.37
GRAMD1B-217ENST00000640939 RTF1Q92541 710 aaKnown RBP29.88■■■□□ 2.37
GRAMD1B-217ENST00000640939 UBR2Q8IWV8 1755 aa29.87■■■□□ 2.37
GRAMD1B-217ENST00000640939 CRKLP46109 303 aaKnown RBP29.87■■■□□ 2.37
GRAMD1B-217ENST00000640939 DCTN1Q14203 1278 aa29.87■■■□□ 2.37
GRAMD1B-217ENST00000640939 TTC5Q8N0Z6 440 aa29.87■■■□□ 2.37
GRAMD1B-217ENST00000640939 KLHL34Q8N239 644 aa29.86■■■□□ 2.37
GRAMD1B-217ENST00000640939 SYT17Q9BSW7 474 aa29.86■■■□□ 2.37
GRAMD1B-217ENST00000640939 RPS6KA4O75676 772 aa29.85■■■□□ 2.37
GRAMD1B-217ENST00000640939 TRAPPC3LQ5T215 181 aa29.85■■■□□ 2.37
GRAMD1B-217ENST00000640939 DLG5Q8TDM6 1919 aa29.84■■■□□ 2.37
GRAMD1B-217ENST00000640939 ZNF790Q6PG37 636 aa29.83■■■□□ 2.37
GRAMD1B-217ENST00000640939 MAPK8IP3Q9UPT6 1336 aa29.82■■■□□ 2.36
GRAMD1B-217ENST00000640939 BTBD11A6QL63 1104 aa29.82■■■□□ 2.36
GRAMD1B-217ENST00000640939 HTATSF1O43719 755 aaKnown RBP29.82■■■□□ 2.36
GRAMD1B-217ENST00000640939 ARHGEF1Q92888 912 aaKnown RBP29.82■■■□□ 2.36
GRAMD1B-217ENST00000640939 PNNQ9H307 717 aaKnown RBP29.82■■■□□ 2.36
GRAMD1B-217ENST00000640939 INTS5Q6P9B9 1019 aaKnown RBP29.81■■■□□ 2.36
GRAMD1B-217ENST00000640939 ZNF496Q96IT1 587 aaPredicted RBP29.81■■■□□ 2.36
GRAMD1B-217ENST00000640939 KCNQ3O43525 872 aa29.8■■■□□ 2.36
GRAMD1B-217ENST00000640939 CYP19A1P11511 503 aaPredicted RBP29.8■■■□□ 2.36
GRAMD1B-217ENST00000640939 NFE2L2Q16236 605 aa29.8■■■□□ 2.36
GRAMD1B-217ENST00000640939 VSIG10Q8N0Z9 540 aa29.8■■■□□ 2.36
GRAMD1B-217ENST00000640939 CCDC87Q9NVE4 849 aa29.8■■■□□ 2.36
GRAMD1B-217ENST00000640939 ADRA2BP18089 450 aa29.79■■■□□ 2.36
GRAMD1B-217ENST00000640939 C4AP0C0L4 1744 aa29.78■■■□□ 2.36
GRAMD1B-217ENST00000640939 RFC4P35249 363 aa29.77■■■□□ 2.36
GRAMD1B-217ENST00000640939 HEG1Q9ULI3 1381 aa29.77■■■□□ 2.36
GRAMD1B-217ENST00000640939 WDR43Q15061 677 aaKnown RBP eCLIP29.76■■■□□ 2.35
GRAMD1B-217ENST00000640939 FMNL2Q96PY5 1086 aa29.75■■■□□ 2.35
GRAMD1B-217ENST00000640939 CCDC146Q8IYE0 955 aa29.74■■■□□ 2.35
GRAMD1B-217ENST00000640939 ZBTB1Q9Y2K1 713 aa29.74■■■□□ 2.35
GRAMD1B-217ENST00000640939 NLGN2Q8NFZ4 835 aa29.73■■■□□ 2.35
GRAMD1B-217ENST00000640939 THUMPD2Q9BTF0 503 aaKnown RBP29.73■■■□□ 2.35
GRAMD1B-217ENST00000640939 SRP68Q9UHB9 627 aaKnown RBP29.73■■■□□ 2.35
GRAMD1B-217ENST00000640939 SOS1Q07889 1333 aaPredicted RBP29.72■■■□□ 2.35
GRAMD1B-217ENST00000640939 DCAF8L1A6NGE4 600 aa29.72■■■□□ 2.35
GRAMD1B-217ENST00000640939 GYS1P13807 737 aa29.72■■■□□ 2.35
GRAMD1B-217ENST00000640939 MIS18AQ9NYP9 233 aa29.72■■■□□ 2.35
GRAMD1B-217ENST00000640939 STARD3NLO95772 234 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms