RNA–Protein interactions for RNA: ENST00000640610.1

PAX6-273, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,730 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-273ENST00000640610 KIAA1211Q6ZU35 1233 aa11.78□□□□□ -0.52
PAX6-273ENST00000640610 ARHGAP45Q92619 1136 aa11.78□□□□□ -0.52
PAX6-273ENST00000640610 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.77□□□□□ -0.52
PAX6-273ENST00000640610 ZSCAN30Q86W11 494 aa11.77□□□□□ -0.52
PAX6-273ENST00000640610 ANP32BQ92688 251 aaKnown RBP11.77□□□□□ -0.52
PAX6-273ENST00000640610 TNPO1Q92973 898 aaKnown RBP11.77□□□□□ -0.52
PAX6-273ENST00000640610 PPP1R9BQ96SB3 815 aa11.77□□□□□ -0.52
PAX6-273ENST00000640610 RBM25P49756 843 aaKnown RBP11.77□□□□□ -0.53
PAX6-273ENST00000640610 GAS2L3Q86XJ1 694 aa11.77□□□□□ -0.53
PAX6-273ENST00000640610 MAP3K19Q56UN5 1328 aa11.76□□□□□ -0.53
PAX6-273ENST00000640610 RAB3GAP1Q15042 981 aa11.76□□□□□ -0.53
PAX6-273ENST00000640610 MAP7D2Q96T17 732 aa11.76□□□□□ -0.53
PAX6-273ENST00000640610 SBNO1A3KN83 1393 aa11.76□□□□□ -0.53
PAX6-273ENST00000640610 IBTKQ9P2D0 1353 aaPredicted RBP11.76□□□□□ -0.53
PAX6-273ENST00000640610 LTN1O94822 1766 aa11.76□□□□□ -0.53
PAX6-273ENST00000640610 SOS2Q07890 1332 aaPredicted RBP11.76□□□□□ -0.53
PAX6-273ENST00000640610 OFD1O75665 1012 aa11.75□□□□□ -0.53
PAX6-273ENST00000640610 TNS3Q68CZ2 1445 aa11.75□□□□□ -0.53
PAX6-273ENST00000640610 SPATA31A3Q5VYP0 1347 aa11.75□□□□□ -0.53
PAX6-273ENST00000640610 CHL1O00533 1208 aa11.74□□□□□ -0.53
PAX6-273ENST00000640610 MSNP26038 577 aaKnown RBP11.74□□□□□ -0.53
PAX6-273ENST00000640610 MED1Q15648 1581 aaPredicted RBP11.74□□□□□ -0.53
PAX6-273ENST00000640610 NFAT5O94916 1531 aa11.74□□□□□ -0.53
PAX6-273ENST00000640610 HSP90AB1P08238 724 aaKnown RBP11.74□□□□□ -0.53
PAX6-273ENST00000640610 NASPP49321 788 aaPredicted RBP11.74□□□□□ -0.53
PAX6-273ENST00000640610 MTHFSDQ2M296 383 aaKnown RBP11.74□□□□□ -0.53
PAX6-273ENST00000640610 API5Q9BZZ5 524 aaKnown RBP11.74□□□□□ -0.53
PAX6-273ENST00000640610 RGS12O14924 1447 aa11.74□□□□□ -0.53
PAX6-273ENST00000640610 SLIT3O75094 1523 aa11.74□□□□□ -0.53
PAX6-273ENST00000640610 GOLGA6L22H0YM25 854 aa11.73□□□□□ -0.53
PAX6-273ENST00000640610 CRYBG1Q9Y4K1 1723 aa11.73□□□□□ -0.53
PAX6-273ENST00000640610 TOM1O60784 492 aa11.73□□□□□ -0.53
PAX6-273ENST00000640610 C16orf71Q8IYS4 520 aaPredicted RBP11.73□□□□□ -0.53
PAX6-273ENST00000640610 GCC1Q96CN9 775 aa11.73□□□□□ -0.53
PAX6-273ENST00000640610 PHRF1Q9P1Y6 1649 aaKnown RBP11.73□□□□□ -0.53
PAX6-273ENST00000640610 PIP4K2BP78356 416 aa11.73□□□□□ -0.53
PAX6-273ENST00000640610 HS1BP3Q53T59 392 aa11.73□□□□□ -0.53
PAX6-273ENST00000640610 CRB1P82279 1406 aa11.72□□□□□ -0.53
PAX6-273ENST00000640610 UBAP1LF5GYI3 381 aa11.72□□□□□ -0.53
PAX6-273ENST00000640610 GCP02774 474 aa11.72□□□□□ -0.53
PAX6-273ENST00000640610 BMP2KLQ5H9B9 411 aa11.72□□□□□ -0.53
PAX6-273ENST00000640610 CERKQ8TCT0 537 aa11.72□□□□□ -0.53
PAX6-273ENST00000640610 CABLES1Q8TDN4 633 aa11.72□□□□□ -0.53
PAX6-273ENST00000640610 RGPD1P0DJD0 1748 aa11.72□□□□□ -0.53
PAX6-273ENST00000640610 APBB1O00213 710 aa11.72□□□□□ -0.53
PAX6-273ENST00000640610 G2E3Q7L622 706 aa11.72□□□□□ -0.53
PAX6-273ENST00000640610 OTUD7AQ8TE49 926 aaPredicted RBP11.72□□□□□ -0.53
PAX6-273ENST00000640610 EYA1Q99502 592 aa11.72□□□□□ -0.53
PAX6-273ENST00000640610 AHDC1Q5TGY3 1603 aaPredicted RBP11.71□□□□□ -0.53
PAX6-273ENST00000640610 GSPT1P15170 499 aaKnown RBP11.71□□□□□ -0.53
PAX6-273ENST00000640610 TBC1D9Q6ZT07 1266 aa11.71□□□□□ -0.53
PAX6-273ENST00000640610 KCNH5Q8NCM2 988 aa11.71□□□□□ -0.53
PAX6-273ENST00000640610 MEIS3Q99687 375 aa11.71□□□□□ -0.53
PAX6-273ENST00000640610 ARHGEF10O15013 1369 aa11.71□□□□□ -0.53
PAX6-273ENST00000640610 F6X3S4 739 aa11.71□□□□□ -0.54
PAX6-273ENST00000640610 AMPHP49418 695 aa11.71□□□□□ -0.54
PAX6-273ENST00000640610 CLEC17AQ6ZS10 378 aa11.71□□□□□ -0.54
PAX6-273ENST00000640610 PHLPP1O60346 1717 aa11.71□□□□□ -0.54
PAX6-273ENST00000640610 CD2BP2O95400 341 aaKnown RBP11.7□□□□□ -0.54
PAX6-273ENST00000640610 SLC4A2P04920 1241 aa11.7□□□□□ -0.54
PAX6-273ENST00000640610 KLHL40Q2TBA0 621 aa11.7□□□□□ -0.54
PAX6-273ENST00000640610 INTS3Q68E01 1043 aaKnown RBP11.7□□□□□ -0.54
PAX6-273ENST00000640610 KIF2CQ99661 725 aa11.7□□□□□ -0.54
PAX6-273ENST00000640610 SMARCA5O60264 1052 aaPredicted RBP11.7□□□□□ -0.54
PAX6-273ENST00000640610 MTERF4Q7Z6M4 381 aaKnown RBP11.7□□□□□ -0.54
PAX6-273ENST00000640610 LTV1Q96GA3 475 aaPredicted RBP11.7□□□□□ -0.54
PAX6-273ENST00000640610 RBM42Q9BTD8 480 aaKnown RBP11.7□□□□□ -0.54
PAX6-273ENST00000640610 ATP10DQ9P241 1426 aa11.7□□□□□ -0.54
PAX6-273ENST00000640610 RGPD5Q99666 1765 aa11.7□□□□□ -0.54
PAX6-273ENST00000640610 FLT4P35916 1363 aa11.69□□□□□ -0.54
PAX6-273ENST00000640610 DCAF8L1A6NGE4 600 aa11.69□□□□□ -0.54
PAX6-273ENST00000640610 NECTIN2Q92692 538 aa11.69□□□□□ -0.54
PAX6-273ENST00000640610 PODXL2Q9NZ53 605 aa11.69□□□□□ -0.54
PAX6-273ENST00000640610 TSPYL4Q9UJ04 414 aa11.69□□□□□ -0.54
PAX6-273ENST00000640610 ABCA3Q99758 1704 aa11.69□□□□□ -0.54
PAX6-273ENST00000640610 ZBTB7CA1YPR0 619 aa11.69□□□□□ -0.54
PAX6-273ENST00000640610 PLEKHM2Q8IWE5 1019 aa11.69□□□□□ -0.54
PAX6-273ENST00000640610 CHMP4BQ9H444 224 aaKnown RBP11.69□□□□□ -0.54
PAX6-273ENST00000640610 HOXC9P31274 260 aa11.68□□□□□ -0.54
PAX6-273ENST00000640610 ZC3H6P61129 1189 aaKnown RBP11.68□□□□□ -0.54
PAX6-273ENST00000640610 CEP85Q6P2H3 762 aa11.68□□□□□ -0.54
PAX6-273ENST00000640610 SLC4A10Q6U841 1118 aa11.68□□□□□ -0.54
PAX6-273ENST00000640610 ARHGEF25Q86VW2 580 aa11.68□□□□□ -0.54
PAX6-273ENST00000640610 DCTPP1Q9H773 170 aa11.68□□□□□ -0.54
PAX6-273ENST00000640610 K7ELQ4 463 aaPredicted RBP11.68□□□□□ -0.54
PAX6-273ENST00000640610 FOXD4L1Q9NU39 408 aa11.68□□□□□ -0.54
PAX6-273ENST00000640610 KIAA0232Q92628 1395 aa11.68□□□□□ -0.54
PAX6-273ENST00000640610 COL16A1Q07092 1604 aaPredicted RBP11.67□□□□□ -0.54
PAX6-273ENST00000640610 USHBP1Q8N6Y0 703 aa11.67□□□□□ -0.54
PAX6-273ENST00000640610 ANKRD44Q8N8A2 993 aa11.67□□□□□ -0.54
PAX6-273ENST00000640610 RTL1A6NKG5 1358 aa11.67□□□□□ -0.54
PAX6-273ENST00000640610 KIF24Q5T7B8 1368 aa11.67□□□□□ -0.54
PAX6-273ENST00000640610 IGSF1Q8N6C5 1336 aa11.67□□□□□ -0.54
PAX6-273ENST00000640610 ZNF500O60304 480 aaPredicted RBP11.67□□□□□ -0.54
PAX6-273ENST00000640610 ZNF445P59923 1031 aa11.67□□□□□ -0.54
PAX6-273ENST00000640610 RTF1Q92541 710 aaKnown RBP11.67□□□□□ -0.54
PAX6-273ENST00000640610 LRRC59Q96AG4 307 aaKnown RBP11.67□□□□□ -0.54
PAX6-273ENST00000640610 DDX49Q9Y6V7 483 aaKnown RBP11.67□□□□□ -0.54
PAX6-273ENST00000640610 IP6K1Q92551 441 aa11.66□□□□□ -0.54
PAX6-273ENST00000640610 PRDM4Q9UKN5 801 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms