RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-238ENST00000640421 SLC52A2Q9HAB3 445 aa23.08■■□□□ 1.29
SPIN3-238ENST00000640421 KDM3BQ7LBC6 1761 aa23.07■■□□□ 1.28
SPIN3-238ENST00000640421 TSPYL4Q9UJ04 414 aa23.07■■□□□ 1.28
SPIN3-238ENST00000640421 NFATC2IPQ8NCF5 419 aa23.06■■□□□ 1.28
SPIN3-238ENST00000640421 EXOSC9Q06265 439 aaKnown RBP23.05■■□□□ 1.28
SPIN3-238ENST00000640421 SEPT12Q8IYM1 358 aa23.05■■□□□ 1.28
SPIN3-238ENST00000640421 DOT1LQ8TEK3 1739 aa23.04■■□□□ 1.28
SPIN3-238ENST00000640421 RBM6P78332 1123 aaKnown RBP23.04■■□□□ 1.28
SPIN3-238ENST00000640421 KRT24Q2M2I5 525 aa23.04■■□□□ 1.28
SPIN3-238ENST00000640421 ITGB4P16144 1822 aa23.04■■□□□ 1.28
SPIN3-238ENST00000640421 ERVV-2B6SEH9 535 aa23.03■■□□□ 1.28
SPIN3-238ENST00000640421 POTEAQ6S8J7 498 aa23.03■■□□□ 1.28
SPIN3-238ENST00000640421 BRWD3Q6RI45 1802 aa23.03■■□□□ 1.28
SPIN3-238ENST00000640421 BTBD11A6QL63 1104 aa23.02■■□□□ 1.28
SPIN3-238ENST00000640421 KCNQ3O43525 872 aa23.02■■□□□ 1.28
SPIN3-238ENST00000640421 CABP4P57796 275 aa23.02■■□□□ 1.28
SPIN3-238ENST00000640421 TSPYL6Q8N831 410 aa23.02■■□□□ 1.28
SPIN3-238ENST00000640421 BABAM1Q9NWV8 329 aa23.02■■□□□ 1.28
SPIN3-238ENST00000640421 KAT6BQ8WYB5 2073 aa23.01■■□□□ 1.27
SPIN3-238ENST00000640421 FAM182BQ5T319 152 aa23.01■■□□□ 1.27
SPIN3-238ENST00000640421 C8orf58Q8NAV2 365 aa23.01■■□□□ 1.27
SPIN3-238ENST00000640421 SLC39A6Q13433 755 aa23■■□□□ 1.27
SPIN3-238ENST00000640421 PAPPAQ13219 1627 aa22.98■■□□□ 1.27
SPIN3-238ENST00000640421 ELL2O00472 640 aaPredicted RBP22.98■■□□□ 1.27
SPIN3-238ENST00000640421 RCAN3Q9UKA8 241 aa22.98■■□□□ 1.27
SPIN3-238ENST00000640421 RXRBP28702 533 aa22.97■■□□□ 1.27
SPIN3-238ENST00000640421 PIGBQ92521 554 aa22.97■■□□□ 1.27
SPIN3-238ENST00000640421 ACSBG1Q96GR2 724 aa22.97■■□□□ 1.27
SPIN3-238ENST00000640421 BCL9O00512 1426 aa22.97■■□□□ 1.27
SPIN3-238ENST00000640421 PRIM1P49642 420 aaKnown RBP22.96■■□□□ 1.27
SPIN3-238ENST00000640421 EIF4A1P60842 406 aaKnown RBP22.96■■□□□ 1.27
SPIN3-238ENST00000640421 ZNF790Q6PG37 636 aa22.96■■□□□ 1.27
SPIN3-238ENST00000640421 TMOD3Q9NYL9 352 aa22.96■■□□□ 1.27
SPIN3-238ENST00000640421 RGS12O14924 1447 aa22.96■■□□□ 1.27
SPIN3-238ENST00000640421 VAMP4O75379 141 aa22.94■■□□□ 1.26
SPIN3-238ENST00000640421 TWISTNBQ3B726 338 aaPredicted RBP22.94■■□□□ 1.26
SPIN3-238ENST00000640421 SYTL4Q96C24 671 aaPredicted RBP22.94■■□□□ 1.26
SPIN3-238ENST00000640421 UBR2Q8IWV8 1755 aa22.94■■□□□ 1.26
SPIN3-238ENST00000640421 KCNQ2O43526 872 aa22.94■■□□□ 1.26
SPIN3-238ENST00000640421 HEG1Q9ULI3 1381 aa22.93■■□□□ 1.26
SPIN3-238ENST00000640421 SUPT16HQ9Y5B9 1047 aaKnown RBP22.93■■□□□ 1.26
SPIN3-238ENST00000640421 KCPQ6ZWJ8 1503 aa22.92■■□□□ 1.26
SPIN3-238ENST00000640421 CT47B1P0C2W7 299 aaPredicted RBP22.92■■□□□ 1.26
SPIN3-238ENST00000640421 RARSP54136 660 aaKnown RBP22.92■■□□□ 1.26
SPIN3-238ENST00000640421 PTF1AQ7RTS3 328 aa22.92■■□□□ 1.26
SPIN3-238ENST00000640421 KRT27Q7Z3Y8 459 aa22.92■■□□□ 1.26
SPIN3-238ENST00000640421 ASAP1Q9ULH1 1129 aa22.92■■□□□ 1.26
SPIN3-238ENST00000640421 SBF2Q86WG5 1849 aa22.91■■□□□ 1.26
SPIN3-238ENST00000640421 ZNF496Q96IT1 587 aaPredicted RBP22.91■■□□□ 1.26
SPIN3-238ENST00000640421 BCAR3O75815 825 aa22.9■■□□□ 1.26
SPIN3-238ENST00000640421 BCL2L13Q9BXK5 485 aa22.9■■□□□ 1.26
SPIN3-238ENST00000640421 C5P01031 1676 aa22.9■■□□□ 1.26
SPIN3-238ENST00000640421 NHSQ6T4R5 1651 aa22.9■■□□□ 1.26
SPIN3-238ENST00000640421 PRAMEF22A3QJZ6 481 aa22.9■■□□□ 1.26
SPIN3-238ENST00000640421 ATG3Q9NT62 314 aa22.9■■□□□ 1.26
SPIN3-238ENST00000640421 TTC5Q8N0Z6 440 aa22.89■■□□□ 1.25
SPIN3-238ENST00000640421 SSH1Q8WYL5 1049 aa22.88■■□□□ 1.25
SPIN3-238ENST00000640421 GIGYF1O75420 1035 aaPredicted RBP22.88■■□□□ 1.25
SPIN3-238ENST00000640421 RNF123Q5XPI4 1314 aa22.87■■□□□ 1.25
SPIN3-238ENST00000640421 TCERG1O14776 1098 aaKnown RBP22.87■■□□□ 1.25
SPIN3-238ENST00000640421 PTCD1O75127 700 aaKnown RBP22.86■■□□□ 1.25
SPIN3-238ENST00000640421 FMNL2Q96PY5 1086 aa22.85■■□□□ 1.25
SPIN3-238ENST00000640421 BTAF1O14981 1849 aa22.85■■□□□ 1.25
SPIN3-238ENST00000640421 ZNF428Q96B54 188 aa22.84■■□□□ 1.25
SPIN3-238ENST00000640421 NECTIN2Q92692 538 aa22.83■■□□□ 1.25
SPIN3-238ENST00000640421 SMC4Q9NTJ3 1288 aa22.83■■□□□ 1.25
SPIN3-238ENST00000640421 PLIN1O60240 522 aa22.83■■□□□ 1.24
SPIN3-238ENST00000640421 HOXB7P09629 217 aa22.83■■□□□ 1.24
SPIN3-238ENST00000640421 ALDH1L2Q3SY69 923 aa22.83■■□□□ 1.24
SPIN3-238ENST00000640421 SOS1Q07889 1333 aaPredicted RBP22.82■■□□□ 1.24
SPIN3-238ENST00000640421 RRP1P56182 461 aaKnown RBP22.82■■□□□ 1.24
SPIN3-238ENST00000640421 SLC4A9Q96Q91 983 aa22.82■■□□□ 1.24
SPIN3-238ENST00000640421 FAM196AQ6ZSG2 479 aa22.81■■□□□ 1.24
SPIN3-238ENST00000640421 SNRPA1P09661 255 aaKnown RBP22.81■■□□□ 1.24
SPIN3-238ENST00000640421 EIF2S2P20042 333 aaKnown RBP22.81■■□□□ 1.24
SPIN3-238ENST00000640421 HDGFL1Q5TGJ6 251 aa22.81■■□□□ 1.24
SPIN3-238ENST00000640421 MRPL50Q8N5N7 158 aaKnown RBP22.81■■□□□ 1.24
SPIN3-238ENST00000640421 LAMB4A4D0S4 1761 aa22.81■■□□□ 1.24
SPIN3-238ENST00000640421 USP16Q9Y5T5 823 aa22.8■■□□□ 1.24
SPIN3-238ENST00000640421 RBM42Q9BTD8 480 aaKnown RBP22.79■■□□□ 1.24
SPIN3-238ENST00000640421 PALLDQ8WX93 1383 aa22.79■■□□□ 1.24
SPIN3-238ENST00000640421 TJP1Q07157 1748 aa22.78■■□□□ 1.24
SPIN3-238ENST00000640421 CCDC30Q5VVM6 783 aa22.77■■□□□ 1.24
SPIN3-238ENST00000640421 BCL11BQ9C0K0 894 aaPredicted RBP22.77■■□□□ 1.24
SPIN3-238ENST00000640421 BRPF1P55201 1214 aaPredicted RBP22.77■■□□□ 1.24
SPIN3-238ENST00000640421 FRAT1Q92837 279 aaPredicted RBP22.77■■□□□ 1.24
SPIN3-238ENST00000640421 CHPF2Q9P2E5 772 aa22.77■■□□□ 1.24
SPIN3-238ENST00000640421 TRIM37O94972 964 aa22.76■■□□□ 1.23
SPIN3-238ENST00000640421 SLC4A2P04920 1241 aa22.76■■□□□ 1.23
SPIN3-238ENST00000640421 IRX6P78412 446 aaPredicted RBP22.76■■□□□ 1.23
SPIN3-238ENST00000640421 TNNQ9UQP3 1299 aa22.76■■□□□ 1.23
SPIN3-238ENST00000640421 ANXA1P04083 346 aa22.75■■□□□ 1.23
SPIN3-238ENST00000640421 VSIG10Q8N0Z9 540 aa22.75■■□□□ 1.23
SPIN3-238ENST00000640421 NOB1Q9ULX3 412 aaKnown RBP22.75■■□□□ 1.23
SPIN3-238ENST00000640421 PROSER3Q2NL68 480 aa22.75■■□□□ 1.23
SPIN3-238ENST00000640421 G2E3Q7L622 706 aa22.75■■□□□ 1.23
SPIN3-238ENST00000640421 DNAJC10Q8IXB1 793 aa22.75■■□□□ 1.23
SPIN3-238ENST00000640421 LOC102724428A0A0B4J2F2 783 aa22.74■■□□□ 1.23
SPIN3-238ENST00000640421 SIK1P57059 783 aa22.74■■□□□ 1.23
SPIN3-238ENST00000640421 PDIA6Q15084 440 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms