RNA–Protein interactions for RNA: ENST00000638223.1

KCNMA1-228, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-228ENST00000638223 RFC4P35249 363 aa11.97□□□□□ -0.49
KCNMA1-228ENST00000638223 NFXL1Q6ZNB6 911 aa11.97□□□□□ -0.49
KCNMA1-228ENST00000638223 STK11IPQ8N1F8 1099 aa11.97□□□□□ -0.49
KCNMA1-228ENST00000638223 RASSF8Q8NHQ8 419 aa11.97□□□□□ -0.49
KCNMA1-228ENST00000638223 GBP4Q96PP9 640 aa11.97□□□□□ -0.49
KCNMA1-228ENST00000638223 SIGLEC1Q9BZZ2 1709 aa11.96□□□□□ -0.49
KCNMA1-228ENST00000638223 PTPRTO14522 1441 aa11.96□□□□□ -0.49
KCNMA1-228ENST00000638223 CLSTN1O94985 981 aa11.96□□□□□ -0.49
KCNMA1-228ENST00000638223 PLA2R1Q13018 1463 aa11.96□□□□□ -0.49
KCNMA1-228ENST00000638223 ABCC3O15438 1527 aa11.96□□□□□ -0.49
KCNMA1-228ENST00000638223 ANKRD13DQ6ZTN6 518 aa11.96□□□□□ -0.49
KCNMA1-228ENST00000638223 NUTM1Q86Y26 1132 aa11.96□□□□□ -0.49
KCNMA1-228ENST00000638223 KIF3AQ9Y496 699 aa11.96□□□□□ -0.49
KCNMA1-228ENST00000638223 MARCH6O60337 910 aa11.96□□□□□ -0.5
KCNMA1-228ENST00000638223 CHAF1AQ13111 956 aaPredicted RBP11.96□□□□□ -0.5
KCNMA1-228ENST00000638223 ABCF2Q9UG63 623 aa11.96□□□□□ -0.5
KCNMA1-228ENST00000638223 BCORL1Q5H9F3 1711 aa11.96□□□□□ -0.5
KCNMA1-228ENST00000638223 H3BQV1 296 aa11.95□□□□□ -0.5
KCNMA1-228ENST00000638223 NCBP3Q53F19 620 aaKnown RBP11.95□□□□□ -0.5
KCNMA1-228ENST00000638223 HSP90AB3PQ58FF7 597 aa11.95□□□□□ -0.5
KCNMA1-228ENST00000638223 IFFO2Q5TF58 517 aa11.95□□□□□ -0.5
KCNMA1-228ENST00000638223 MCTP1Q6DN14 999 aa11.95□□□□□ -0.5
KCNMA1-228ENST00000638223 IPO9Q96P70 1041 aaKnown RBP11.95□□□□□ -0.5
KCNMA1-228ENST00000638223 WWC3Q9ULE0 1092 aa11.95□□□□□ -0.5
KCNMA1-228ENST00000638223 NKTRP30414 1462 aaKnown RBP11.95□□□□□ -0.5
KCNMA1-228ENST00000638223 INO80Q9ULG1 1556 aaPredicted RBP11.95□□□□□ -0.5
KCNMA1-228ENST00000638223 TSPYL6Q8N831 410 aa11.95□□□□□ -0.5
KCNMA1-228ENST00000638223 SMARCA5O60264 1052 aaPredicted RBP11.95□□□□□ -0.5
KCNMA1-228ENST00000638223 IL13P35225 146 aa11.95□□□□□ -0.5
KCNMA1-228ENST00000638223 IFIT5Q13325 482 aaKnown RBP11.95□□□□□ -0.5
KCNMA1-228ENST00000638223 DCAF5Q96JK2 942 aa11.95□□□□□ -0.5
KCNMA1-228ENST00000638223 RSPH6AQ9H0K4 717 aa11.95□□□□□ -0.5
KCNMA1-228ENST00000638223 USP21Q9UK80 565 aa11.95□□□□□ -0.5
KCNMA1-228ENST00000638223 KDM5CP41229 1560 aa11.95□□□□□ -0.5
KCNMA1-228ENST00000638223 RRP12Q5JTH9 1297 aaKnown RBP11.95□□□□□ -0.5
KCNMA1-228ENST00000638223 SF3A1Q15459 793 aaKnown RBP11.94□□□□□ -0.5
KCNMA1-228ENST00000638223 NLRP1Q9C000 1473 aa11.94□□□□□ -0.5
KCNMA1-228ENST00000638223 ARHGEF10O15013 1369 aa11.94□□□□□ -0.5
KCNMA1-228ENST00000638223 SKAP1Q86WV1 359 aa11.94□□□□□ -0.5
KCNMA1-228ENST00000638223 C22orf23Q9BZE7 217 aa11.94□□□□□ -0.5
KCNMA1-228ENST00000638223 SBNO1A3KN83 1393 aa11.94□□□□□ -0.5
KCNMA1-228ENST00000638223 RBM5P52756 815 aaKnown RBP eCLIP11.94□□□□□ -0.5
KCNMA1-228ENST00000638223 FOSBP53539 338 aa11.94□□□□□ -0.5
KCNMA1-228ENST00000638223 CHD1LQ86WJ1 897 aa11.94□□□□□ -0.5
KCNMA1-228ENST00000638223 PRR36Q9H6K5 1346 aa11.93□□□□□ -0.5
KCNMA1-228ENST00000638223 IDH1O75874 414 aaKnown RBP11.93□□□□□ -0.5
KCNMA1-228ENST00000638223 SMARCC1Q92922 1105 aaPredicted RBP11.93□□□□□ -0.5
KCNMA1-228ENST00000638223 LGR6Q9HBX8 967 aa11.93□□□□□ -0.5
KCNMA1-228ENST00000638223 ERICH2A1L162 156 aa11.93□□□□□ -0.5
KCNMA1-228ENST00000638223 HMGB2P26583 209 aaKnown RBP11.93□□□□□ -0.5
KCNMA1-228ENST00000638223 CTDP1Q9Y5B0 961 aaPredicted RBP11.93□□□□□ -0.5
KCNMA1-228ENST00000638223 IL16Q14005 1332 aa11.93□□□□□ -0.5
KCNMA1-228ENST00000638223 RNMTO43148 476 aaKnown RBP11.93□□□□□ -0.5
KCNMA1-228ENST00000638223 HTATSF1O43719 755 aaKnown RBP11.93□□□□□ -0.5
KCNMA1-228ENST00000638223 KIDINS220Q9ULH0 1771 aa11.93□□□□□ -0.5
KCNMA1-228ENST00000638223 KDM4AO75164 1064 aa11.92□□□□□ -0.5
KCNMA1-228ENST00000638223 PRIM1P49642 420 aaKnown RBP11.92□□□□□ -0.5
KCNMA1-228ENST00000638223 CCDC8Q9H0W5 538 aaPredicted RBP11.92□□□□□ -0.5
KCNMA1-228ENST00000638223 CWC25Q9NXE8 425 aaPredicted RBP11.92□□□□□ -0.5
KCNMA1-228ENST00000638223 ANKIB1Q9P2G1 1089 aa11.92□□□□□ -0.5
KCNMA1-228ENST00000638223 PLXNC1O60486 1568 aa11.92□□□□□ -0.5
KCNMA1-228ENST00000638223 ZFYVE9O95405 1425 aa11.92□□□□□ -0.5
KCNMA1-228ENST00000638223 RAI14Q9P0K7 980 aa11.92□□□□□ -0.5
KCNMA1-228ENST00000638223 LRP2BPQ9P2M1 347 aa11.92□□□□□ -0.5
KCNMA1-228ENST00000638223 MAP3K5Q99683 1374 aa11.92□□□□□ -0.5
KCNMA1-228ENST00000638223 NBPF5PQ86XG9 351 aaPredicted RBP11.92□□□□□ -0.5
KCNMA1-228ENST00000638223 RPGRQ92834 1020 aaKnown RBP11.92□□□□□ -0.5
KCNMA1-228ENST00000638223 PCDH11XQ9BZA7 1347 aa11.91□□□□□ -0.5
KCNMA1-228ENST00000638223 PCDH11YQ9BZA8 1340 aa11.91□□□□□ -0.5
KCNMA1-228ENST00000638223 KIF1BPQ96EK5 621 aa11.91□□□□□ -0.5
KCNMA1-228ENST00000638223 TFCP2L1Q9NZI6 479 aa11.91□□□□□ -0.5
KCNMA1-228ENST00000638223 PIK3R4Q99570 1358 aa11.91□□□□□ -0.5
KCNMA1-228ENST00000638223 LDHAL6AQ6ZMR3 332 aa11.91□□□□□ -0.5
KCNMA1-228ENST00000638223 BOLA2Q9H3K6 86 aa11.91□□□□□ -0.5
KCNMA1-228ENST00000638223 PTPRCP08575 1304 aa11.91□□□□□ -0.5
KCNMA1-228ENST00000638223 C6orf229H3BNL8 230 aa11.9□□□□□ -0.5
KCNMA1-228ENST00000638223 PIK3C2GO75747 1445 aa11.9□□□□□ -0.5
KCNMA1-228ENST00000638223 MEIS3Q99687 375 aa11.9□□□□□ -0.5
KCNMA1-228ENST00000638223 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.9□□□□□ -0.5
KCNMA1-228ENST00000638223 ANKRD18BA2A2Z9 1011 aa11.9□□□□□ -0.5
KCNMA1-228ENST00000638223 ZNF622Q969S3 477 aaKnown RBP eCLIP11.9□□□□□ -0.5
KCNMA1-228ENST00000638223 IFIT1P09914 478 aaKnown RBP11.9□□□□□ -0.51
KCNMA1-228ENST00000638223 ATP2B2Q01814 1243 aa11.9□□□□□ -0.51
KCNMA1-228ENST00000638223 NIP7Q9Y221 180 aaKnown RBP eCLIP11.9□□□□□ -0.51
KCNMA1-228ENST00000638223 VPS37CA5D8V6 355 aaPredicted RBP11.89□□□□□ -0.51
KCNMA1-228ENST00000638223 CHMP4CQ96CF2 233 aa11.89□□□□□ -0.51
KCNMA1-228ENST00000638223 TNNQ9UQP3 1299 aa11.89□□□□□ -0.51
KCNMA1-228ENST00000638223 IKQ13123 557 aaPredicted RBP11.89□□□□□ -0.51
KCNMA1-228ENST00000638223 CWC27Q6UX04 472 aaKnown RBP11.89□□□□□ -0.51
KCNMA1-228ENST00000638223 PPP1R42Q7Z4L9 355 aa11.89□□□□□ -0.51
KCNMA1-228ENST00000638223 KIAA0232Q92628 1395 aa11.89□□□□□ -0.51
KCNMA1-228ENST00000638223 NEK4P51957 841 aa11.89□□□□□ -0.51
KCNMA1-228ENST00000638223 DZIP3Q86Y13 1208 aaKnown RBP11.89□□□□□ -0.51
KCNMA1-228ENST00000638223 ARHGAP31Q2M1Z3 1444 aa11.89□□□□□ -0.51
KCNMA1-228ENST00000638223 A2ML1A8K2U0 1454 aa11.89□□□□□ -0.51
KCNMA1-228ENST00000638223 ZSCAN29Q8IWY8 852 aaPredicted RBP11.88□□□□□ -0.51
KCNMA1-228ENST00000638223 DEPDC5O75140 1603 aa11.88□□□□□ -0.51
KCNMA1-228ENST00000638223 VAMP4O75379 141 aa11.88□□□□□ -0.51
KCNMA1-228ENST00000638223 TRIM29Q14134 588 aa11.88□□□□□ -0.51
KCNMA1-228ENST00000638223 SETDB2Q96T68 719 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms