RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 PIGBQ92521 554 aa21.02■□□□□ 0.96
CLN6-216ENST00000636876 BTAF1O14981 1849 aa21.01■□□□□ 0.95
CLN6-216ENST00000636876 LRP5O75197 1615 aa21.01■□□□□ 0.95
CLN6-216ENST00000636876 NFATC2IPQ8NCF5 419 aa21.01■□□□□ 0.95
CLN6-216ENST00000636876 THUMPD2Q9BTF0 503 aaKnown RBP21.01■□□□□ 0.95
CLN6-216ENST00000636876 NGEFQ8N5V2 710 aa21■□□□□ 0.95
CLN6-216ENST00000636876 CCDC27Q2M243 656 aa20.99■□□□□ 0.95
CLN6-216ENST00000636876 SIPA1L3O60292 1781 aaPredicted RBP20.99■□□□□ 0.95
CLN6-216ENST00000636876 SF3B2Q13435 895 aaKnown RBP20.98■□□□□ 0.95
CLN6-216ENST00000636876 APBA3O96018 575 aa20.97■□□□□ 0.95
CLN6-216ENST00000636876 SALL2Q9Y467 1007 aaPredicted RBP20.97■□□□□ 0.95
CLN6-216ENST00000636876 WWC1Q8IX03 1113 aa20.96■□□□□ 0.95
CLN6-216ENST00000636876 TAF7Q15545 349 aaPredicted RBP20.95■□□□□ 0.94
CLN6-216ENST00000636876 ASAP1Q9ULH1 1129 aa20.95■□□□□ 0.94
CLN6-216ENST00000636876 SMARCC1Q92922 1105 aaPredicted RBP20.94■□□□□ 0.94
CLN6-216ENST00000636876 ATG3Q9NT62 314 aa20.94■□□□□ 0.94
CLN6-216ENST00000636876 PAPPAQ13219 1627 aa20.93■□□□□ 0.94
CLN6-216ENST00000636876 PLSCR1O15162 318 aa20.93■□□□□ 0.94
CLN6-216ENST00000636876 BAG6P46379 1132 aa20.93■□□□□ 0.94
CLN6-216ENST00000636876 CALD1Q05682 793 aaKnown RBP20.93■□□□□ 0.94
CLN6-216ENST00000636876 BTBD11A6QL63 1104 aa20.92■□□□□ 0.94
CLN6-216ENST00000636876 SLC39A6Q13433 755 aa20.92■□□□□ 0.94
CLN6-216ENST00000636876 PALLDQ8WX93 1383 aa20.92■□□□□ 0.94
CLN6-216ENST00000636876 RGPD3A6NKT7 1758 aaPredicted RBP20.91■□□□□ 0.94
CLN6-216ENST00000636876 RGPD4Q7Z3J3 1758 aa20.91■□□□□ 0.94
CLN6-216ENST00000636876 WDR63Q8IWG1 891 aa20.9■□□□□ 0.94
CLN6-216ENST00000636876 BABAM1Q9NWV8 329 aa20.9■□□□□ 0.94
CLN6-216ENST00000636876 IL16Q14005 1332 aa20.89■□□□□ 0.93
CLN6-216ENST00000636876 ZNF521Q96K83 1311 aa20.89■□□□□ 0.93
CLN6-216ENST00000636876 HNRNPUQ00839 825 aaKnown RBP eCLIP20.89■□□□□ 0.93
CLN6-216ENST00000636876 EN1Q05925 392 aaPredicted RBP20.89■□□□□ 0.93
CLN6-216ENST00000636876 ZNF790Q6PG37 636 aa20.89■□□□□ 0.93
CLN6-216ENST00000636876 CAMKK2Q96RR4 588 aa20.89■□□□□ 0.93
CLN6-216ENST00000636876 MIS18AQ9NYP9 233 aa20.89■□□□□ 0.93
CLN6-216ENST00000636876 LY75O60449 1722 aa20.89■□□□□ 0.93
CLN6-216ENST00000636876 KDM3BQ7LBC6 1761 aa20.88■□□□□ 0.93
CLN6-216ENST00000636876 CHL1O00533 1208 aa20.88■□□□□ 0.93
CLN6-216ENST00000636876 KCNQ3O43525 872 aa20.88■□□□□ 0.93
CLN6-216ENST00000636876 TTC5Q8N0Z6 440 aa20.88■□□□□ 0.93
CLN6-216ENST00000636876 CFAP44Q96MT7 982 aa20.88■□□□□ 0.93
CLN6-216ENST00000636876 IFT57Q9NWB7 429 aa20.88■□□□□ 0.93
CLN6-216ENST00000636876 TSPYL4Q9UJ04 414 aa20.88■□□□□ 0.93
CLN6-216ENST00000636876 LAS1LQ9Y4W2 734 aaKnown RBP20.88■□□□□ 0.93
CLN6-216ENST00000636876 KCPQ6ZWJ8 1503 aa20.88■□□□□ 0.93
CLN6-216ENST00000636876 UBR2Q8IWV8 1755 aa20.87■□□□□ 0.93
CLN6-216ENST00000636876 RREB1Q92766 1687 aa20.87■□□□□ 0.93
CLN6-216ENST00000636876 PSDA5PKW4 1024 aaPredicted RBP20.87■□□□□ 0.93
CLN6-216ENST00000636876 PTCD1O75127 700 aaKnown RBP20.87■□□□□ 0.93
CLN6-216ENST00000636876 ZNF853P0CG23 659 aa20.87■□□□□ 0.93
CLN6-216ENST00000636876 GNAI1P63096 354 aa20.87■□□□□ 0.93
CLN6-216ENST00000636876 LOC102724428A0A0B4J2F2 783 aa20.86■□□□□ 0.93
CLN6-216ENST00000636876 SIK1P57059 783 aa20.86■□□□□ 0.93
CLN6-216ENST00000636876 EZH2Q15910 746 aaKnown RBP20.86■□□□□ 0.93
CLN6-216ENST00000636876 TXNRD1Q16881 649 aa20.86■□□□□ 0.93
CLN6-216ENST00000636876 PROM2Q8N271 834 aa20.86■□□□□ 0.93
CLN6-216ENST00000636876 RBM42Q9BTD8 480 aaKnown RBP20.86■□□□□ 0.93
CLN6-216ENST00000636876 NUP188Q5SRE5 1749 aa20.84■□□□□ 0.93
CLN6-216ENST00000636876 SLC27A3Q5K4L6 730 aa20.84■□□□□ 0.93
CLN6-216ENST00000636876 ZNF496Q96IT1 587 aaPredicted RBP20.84■□□□□ 0.93
CLN6-216ENST00000636876 FMNL2Q96PY5 1086 aa20.84■□□□□ 0.93
CLN6-216ENST00000636876 SLC4A9Q96Q91 983 aa20.84■□□□□ 0.93
CLN6-216ENST00000636876 CCNL1Q9UK58 526 aaPredicted RBP20.84■□□□□ 0.93
CLN6-216ENST00000636876 MBIPQ9NS73 344 aa20.83■□□□□ 0.93
CLN6-216ENST00000636876 ZNF831Q5JPB2 1677 aa20.83■□□□□ 0.92
CLN6-216ENST00000636876 KCNQ4P56696 695 aa20.82■□□□□ 0.92
CLN6-216ENST00000636876 EIF4A1P60842 406 aaKnown RBP20.82■□□□□ 0.92
CLN6-216ENST00000636876 LRRC4BQ9NT99 713 aa20.82■□□□□ 0.92
CLN6-216ENST00000636876 HEG1Q9ULI3 1381 aa20.82■□□□□ 0.92
CLN6-216ENST00000636876 ATP6V1AP38606 617 aa20.81■□□□□ 0.92
CLN6-216ENST00000636876 GOLGA2Q08379 1002 aa20.81■□□□□ 0.92
CLN6-216ENST00000636876 VSIG10Q8N0Z9 540 aa20.81■□□□□ 0.92
CLN6-216ENST00000636876 SPINK5Q9NQ38 1064 aaPredicted RBP20.81■□□□□ 0.92
CLN6-216ENST00000636876 CICQ96RK0 1608 aaPredicted RBP20.8■□□□□ 0.92
CLN6-216ENST00000636876 ITPK1Q13572 414 aa20.8■□□□□ 0.92
CLN6-216ENST00000636876 ZBED9Q6R2W3 1325 aa20.79■□□□□ 0.92
CLN6-216ENST00000636876 TJP1Q07157 1748 aa20.79■□□□□ 0.92
CLN6-216ENST00000636876 TSR2Q969E8 191 aaKnown RBP20.79■□□□□ 0.92
CLN6-216ENST00000636876 MYH16Q9H6N6 1097 aa20.78■□□□□ 0.92
CLN6-216ENST00000636876 TAF1LQ8IZX4 1826 aa20.78■□□□□ 0.92
CLN6-216ENST00000636876 FANCIQ9NVI1 1328 aa20.78■□□□□ 0.92
CLN6-216ENST00000636876 E9PSI1 815 aa20.77■□□□□ 0.92
CLN6-216ENST00000636876 SNRPA1P09661 255 aaKnown RBP20.77■□□□□ 0.92
CLN6-216ENST00000636876 DNAJC10Q8IXB1 793 aa20.77■□□□□ 0.92
CLN6-216ENST00000636876 C5P01031 1676 aa20.77■□□□□ 0.91
CLN6-216ENST00000636876 GIGYF1O75420 1035 aaPredicted RBP20.76■□□□□ 0.91
CLN6-216ENST00000636876 HMGB2P26583 209 aaKnown RBP20.76■□□□□ 0.91
CLN6-216ENST00000636876 SLFN5Q08AF3 891 aa20.76■□□□□ 0.91
CLN6-216ENST00000636876 LINC00116Q8NCU8 138 aa20.76■□□□□ 0.91
CLN6-216ENST00000636876 TEX13AQ9BXU3 409 aaPredicted RBP20.76■□□□□ 0.91
CLN6-216ENST00000636876 KRT24Q2M2I5 525 aa20.75■□□□□ 0.91
CLN6-216ENST00000636876 CDCA7LQ96GN5 454 aa20.75■□□□□ 0.91
CLN6-216ENST00000636876 COL5A3P25940 1745 aaPredicted RBP20.75■□□□□ 0.91
CLN6-216ENST00000636876 PRAMEF22A3QJZ6 481 aa20.74■□□□□ 0.91
CLN6-216ENST00000636876 R3HDM1Q15032 1099 aaKnown RBP20.74■□□□□ 0.91
CLN6-216ENST00000636876 C4BP0C0L5 1744 aa20.73■□□□□ 0.91
CLN6-216ENST00000636876 CYP19A1P11511 503 aaPredicted RBP20.73■□□□□ 0.91
CLN6-216ENST00000636876 TRMT2AQ8IZ69 625 aaKnown RBP20.73■□□□□ 0.91
CLN6-216ENST00000636876 STARD3NLO95772 234 aa20.72■□□□□ 0.91
CLN6-216ENST00000636876 C8orf58Q8NAV2 365 aa20.72■□□□□ 0.91
CLN6-216ENST00000636876 YTHDC1Q96MU7 727 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms