RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 SMARCA5O60264 1052 aaPredicted RBP17.86■□□□□ 0.45
CLN6-215ENST00000636674 SLC4A2P04920 1241 aa17.86■□□□□ 0.45
CLN6-215ENST00000636674 SALL3Q9BXA9 1300 aa17.86■□□□□ 0.45
CLN6-215ENST00000636674 FLT4P35916 1363 aa17.85■□□□□ 0.45
CLN6-215ENST00000636674 LMBRD1Q9NUN5 540 aa17.85■□□□□ 0.45
CLN6-215ENST00000636674 MAP3K19Q56UN5 1328 aa17.85■□□□□ 0.45
CLN6-215ENST00000636674 USP54Q70EL1 1684 aa17.85■□□□□ 0.45
CLN6-215ENST00000636674 PTPRUQ92729 1446 aa17.85■□□□□ 0.45
CLN6-215ENST00000636674 KCNA4P22459 653 aa17.84■□□□□ 0.45
CLN6-215ENST00000636674 NASPP49321 788 aaPredicted RBP17.84■□□□□ 0.45
CLN6-215ENST00000636674 PDE1AP54750 535 aa17.84■□□□□ 0.45
CLN6-215ENST00000636674 PXDNLA1KZ92 1463 aa17.84■□□□□ 0.45
CLN6-215ENST00000636674 STRCP1A6NGW2 1772 aa17.83■□□□□ 0.45
CLN6-215ENST00000636674 MCTP1Q6DN14 999 aa17.82■□□□□ 0.44
CLN6-215ENST00000636674 SOS1Q07889 1333 aaPredicted RBP17.82■□□□□ 0.44
CLN6-215ENST00000636674 IGSF1Q8N6C5 1336 aa17.82■□□□□ 0.44
CLN6-215ENST00000636674 PIK3C2AO00443 1686 aa17.82■□□□□ 0.44
CLN6-215ENST00000636674 HTATSF1O43719 755 aaKnown RBP17.82■□□□□ 0.44
CLN6-215ENST00000636674 IL17RAQ96F46 866 aa17.82■□□□□ 0.44
CLN6-215ENST00000636674 TSPYL4Q9UJ04 414 aa17.82■□□□□ 0.44
CLN6-215ENST00000636674 GNAI2P04899 355 aa17.81■□□□□ 0.44
CLN6-215ENST00000636674 MTHFSDQ2M296 383 aaKnown RBP17.81■□□□□ 0.44
CLN6-215ENST00000636674 RTF1Q92541 710 aaKnown RBP17.81■□□□□ 0.44
CLN6-215ENST00000636674 NAP1L5Q96NT1 182 aaPredicted RBP17.81■□□□□ 0.44
CLN6-215ENST00000636674 MCM2P49736 904 aa17.81■□□□□ 0.44
CLN6-215ENST00000636674 G2E3Q7L622 706 aa17.81■□□□□ 0.44
CLN6-215ENST00000636674 FBXO41Q8TF61 875 aa17.81■□□□□ 0.44
CLN6-215ENST00000636674 PKP1Q13835 747 aa17.8■□□□□ 0.44
CLN6-215ENST00000636674 ANP32BQ92688 251 aaKnown RBP17.8■□□□□ 0.44
CLN6-215ENST00000636674 ZDHHC9Q9Y397 364 aa17.8■□□□□ 0.44
CLN6-215ENST00000636674 ZSCAN23Q3MJ62 389 aa17.79■□□□□ 0.44
CLN6-215ENST00000636674 ZGPATQ8N5A5 531 aaKnown RBP17.79■□□□□ 0.44
CLN6-215ENST00000636674 APBB1O00213 710 aa17.79■□□□□ 0.44
CLN6-215ENST00000636674 GNAI3P08754 354 aa17.79■□□□□ 0.44
CLN6-215ENST00000636674 ANAPC15P60006 121 aa17.79■□□□□ 0.44
CLN6-215ENST00000636674 UBE2Q2Q8WVN8 375 aa17.79■□□□□ 0.44
CLN6-215ENST00000636674 MARF1Q9Y4F3 1742 aaKnown RBP17.79■□□□□ 0.44
CLN6-215ENST00000636674 DIP2AQ14689 1571 aa17.78■□□□□ 0.44
CLN6-215ENST00000636674 AOX1Q06278 1338 aa17.78■□□□□ 0.44
CLN6-215ENST00000636674 F6X3S4 739 aa17.77■□□□□ 0.44
CLN6-215ENST00000636674 EPB41L2O43491 1005 aaKnown RBP17.77■□□□□ 0.44
CLN6-215ENST00000636674 FOXO3O43524 673 aa17.77■□□□□ 0.44
CLN6-215ENST00000636674 HS1BP3Q53T59 392 aa17.77■□□□□ 0.44
CLN6-215ENST00000636674 ILDR1Q86SU0 546 aaPredicted RBP17.77■□□□□ 0.44
CLN6-215ENST00000636674 ESYT1Q9BSJ8 1104 aa17.77■□□□□ 0.44
CLN6-215ENST00000636674 STK31Q9BXU1 1019 aa17.77■□□□□ 0.44
CLN6-215ENST00000636674 LRRCC1Q9C099 1032 aa17.77■□□□□ 0.44
CLN6-215ENST00000636674 NWD1Q149M9 1564 aa17.77■□□□□ 0.44
CLN6-215ENST00000636674 CUL4AQ13619 759 aa17.77■□□□□ 0.43
CLN6-215ENST00000636674 CAVIN1Q6NZI2 390 aaKnown RBP17.77■□□□□ 0.43
CLN6-215ENST00000636674 SLC4A10Q6U841 1118 aa17.77■□□□□ 0.43
CLN6-215ENST00000636674 ZSCAN30Q86W11 494 aa17.77■□□□□ 0.43
CLN6-215ENST00000636674 STAP2Q9UGK3 403 aa17.77■□□□□ 0.43
CLN6-215ENST00000636674 RGPD8O14715 1765 aaPredicted RBP17.77■□□□□ 0.43
CLN6-215ENST00000636674 BABAM1Q9NWV8 329 aa17.76■□□□□ 0.43
CLN6-215ENST00000636674 MIS18AQ9NYP9 233 aa17.76■□□□□ 0.43
CLN6-215ENST00000636674 MX1P20591 662 aa17.76■□□□□ 0.43
CLN6-215ENST00000636674 ATP8B2P98198 1209 aa17.76■□□□□ 0.43
CLN6-215ENST00000636674 FLIIQ13045 1269 aa17.76■□□□□ 0.43
CLN6-215ENST00000636674 CCDC30Q5VVM6 783 aa17.76■□□□□ 0.43
CLN6-215ENST00000636674 SRCIN1Q9C0H9 1055 aa17.76■□□□□ 0.43
CLN6-215ENST00000636674 MCCP23508 829 aa17.75■□□□□ 0.43
CLN6-215ENST00000636674 GPT2Q8TD30 523 aa17.75■□□□□ 0.43
CLN6-215ENST00000636674 INTS4Q96HW7 963 aaKnown RBP17.75■□□□□ 0.43
CLN6-215ENST00000636674 TMX3Q96JJ7 454 aa17.75■□□□□ 0.43
CLN6-215ENST00000636674 PDLIM2Q96JY6 352 aa17.75■□□□□ 0.43
CLN6-215ENST00000636674 EYA1Q99502 592 aa17.75■□□□□ 0.43
CLN6-215ENST00000636674 CHD2O14647 1828 aaKnown RBP17.75■□□□□ 0.43
CLN6-215ENST00000636674 EXOC6BQ9Y2D4 811 aa17.74■□□□□ 0.43
CLN6-215ENST00000636674 SLC26A8Q96RN1 970 aa17.74■□□□□ 0.43
CLN6-215ENST00000636674 BRD1O95696 1058 aa17.73■□□□□ 0.43
CLN6-215ENST00000636674 NEK4P51957 841 aa17.73■□□□□ 0.43
CLN6-215ENST00000636674 PRPF40AO75400 957 aaKnown RBP17.72■□□□□ 0.43
CLN6-215ENST00000636674 MBD3O95983 291 aa17.72■□□□□ 0.43
CLN6-215ENST00000636674 CHMLP26374 656 aa17.72■□□□□ 0.43
CLN6-215ENST00000636674 ANKARQ7Z5J8 1434 aa17.72■□□□□ 0.43
CLN6-215ENST00000636674 TBX22Q9Y458 520 aa17.72■□□□□ 0.43
CLN6-215ENST00000636674 CRYBG1Q9Y4K1 1723 aa17.72■□□□□ 0.43
CLN6-215ENST00000636674 XIRP1Q702N8 1843 aaKnown RBP17.71■□□□□ 0.43
CLN6-215ENST00000636674 MAP3K5Q99683 1374 aa17.71■□□□□ 0.43
CLN6-215ENST00000636674 PNMA6EA0A0J9YXQ4 647 aa17.71■□□□□ 0.43
CLN6-215ENST00000636674 RBSNQ9H1K0 784 aa17.71■□□□□ 0.43
CLN6-215ENST00000636674 MED1Q15648 1581 aaPredicted RBP17.71■□□□□ 0.43
CLN6-215ENST00000636674 GNAT3A8MTJ3 354 aa17.71■□□□□ 0.42
CLN6-215ENST00000636674 TPM2P07951 284 aa17.71■□□□□ 0.42
CLN6-215ENST00000636674 KCNA6P17658 529 aa17.71■□□□□ 0.42
CLN6-215ENST00000636674 NCLP19338 710 aaKnown RBP17.71■□□□□ 0.42
CLN6-215ENST00000636674 FKBP5Q13451 457 aaPredicted RBP17.71■□□□□ 0.42
CLN6-215ENST00000636674 LRSAM1Q6UWE0 723 aa17.71■□□□□ 0.42
CLN6-215ENST00000636674 NUTM2FA1L443 756 aa17.7■□□□□ 0.42
CLN6-215ENST00000636674 AMPHP49418 695 aa17.7■□□□□ 0.42
CLN6-215ENST00000636674 PRIM1P49642 420 aaKnown RBP17.7■□□□□ 0.42
CLN6-215ENST00000636674 RRP9O43818 475 aaKnown RBP17.69■□□□□ 0.42
CLN6-215ENST00000636674 TMEM63CQ9P1W3 806 aa17.69■□□□□ 0.42
CLN6-215ENST00000636674 PALD1Q9ULE6 856 aa17.69■□□□□ 0.42
CLN6-215ENST00000636674 SOX12O15370 315 aa17.68■□□□□ 0.42
CLN6-215ENST00000636674 SSH3Q8TE77 659 aa17.68■□□□□ 0.42
CLN6-215ENST00000636674 KDM3BQ7LBC6 1761 aa17.67■□□□□ 0.42
CLN6-215ENST00000636674 OFD1O75665 1012 aa17.67■□□□□ 0.42
CLN6-215ENST00000636674 MSNP26038 577 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 457.6 ms