RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 SIK1P57059 783 aa22.6■■□□□ 1.21
LIN28B-202ENST00000635857 TEFQ10587 303 aa22.6■■□□□ 1.21
LIN28B-202ENST00000635857 WDR43Q15061 677 aaKnown RBP eCLIP22.6■■□□□ 1.21
LIN28B-202ENST00000635857 RTF1Q92541 710 aaKnown RBP22.6■■□□□ 1.21
LIN28B-202ENST00000635857 RBM42Q9BTD8 480 aaKnown RBP22.6■■□□□ 1.21
LIN28B-202ENST00000635857 SLC52A2Q9HAB3 445 aa22.6■■□□□ 1.21
LIN28B-202ENST00000635857 ATG3Q9NT62 314 aa22.6■■□□□ 1.21
LIN28B-202ENST00000635857 ZNF827Q17R98 1081 aa22.59■■□□□ 1.21
LIN28B-202ENST00000635857 PHACTR3Q96KR7 559 aa22.59■■□□□ 1.21
LIN28B-202ENST00000635857 QSER1Q2KHR3 1735 aa22.59■■□□□ 1.21
LIN28B-202ENST00000635857 MRC1P22897 1456 aa22.59■■□□□ 1.21
LIN28B-202ENST00000635857 ADAMTS7Q9UKP4 1686 aa22.58■■□□□ 1.21
LIN28B-202ENST00000635857 CASZ1Q86V15 1759 aa22.58■■□□□ 1.21
LIN28B-202ENST00000635857 ATP6V1AP38606 617 aa22.58■■□□□ 1.21
LIN28B-202ENST00000635857 AKT1S1Q96B36 256 aa22.58■■□□□ 1.21
LIN28B-202ENST00000635857 AK7Q96M32 723 aa22.58■■□□□ 1.21
LIN28B-202ENST00000635857 LGR6Q9HBX8 967 aa22.58■■□□□ 1.21
LIN28B-202ENST00000635857 ANP32CO43423 234 aa22.57■■□□□ 1.2
LIN28B-202ENST00000635857 SPON1Q9HCB6 807 aa22.57■■□□□ 1.2
LIN28B-202ENST00000635857 C4BP0C0L5 1744 aa22.56■■□□□ 1.2
LIN28B-202ENST00000635857 ZNF831Q5JPB2 1677 aa22.55■■□□□ 1.2
LIN28B-202ENST00000635857 TUBGCP6Q96RT7 1819 aa22.54■■□□□ 1.2
LIN28B-202ENST00000635857 MSH5O43196 834 aa22.54■■□□□ 1.2
LIN28B-202ENST00000635857 TTC5Q8N0Z6 440 aa22.54■■□□□ 1.2
LIN28B-202ENST00000635857 PTCD1O75127 700 aaKnown RBP22.53■■□□□ 1.2
LIN28B-202ENST00000635857 FLAD1Q8NFF5 587 aa22.53■■□□□ 1.2
LIN28B-202ENST00000635857 PPP1R1BQ9UD71 204 aaPredicted RBP22.53■■□□□ 1.2
LIN28B-202ENST00000635857 ZBTB7AO95365 584 aa22.52■■□□□ 1.2
LIN28B-202ENST00000635857 HTATSF1O43719 755 aaKnown RBP22.51■■□□□ 1.19
LIN28B-202ENST00000635857 MTFR1LQ9H019 292 aa22.51■■□□□ 1.19
LIN28B-202ENST00000635857 IL17REQ8NFR9 667 aa22.5■■□□□ 1.19
LIN28B-202ENST00000635857 SLC16A10Q8TF71 515 aa22.5■■□□□ 1.19
LIN28B-202ENST00000635857 PNPLA7Q6ZV29 1317 aa22.5■■□□□ 1.19
LIN28B-202ENST00000635857 DLG5Q8TDM6 1919 aa22.49■■□□□ 1.19
LIN28B-202ENST00000635857 LINC00116Q8NCU8 138 aa22.49■■□□□ 1.19
LIN28B-202ENST00000635857 PLEKHF1Q96S99 279 aa22.49■■□□□ 1.19
LIN28B-202ENST00000635857 PDGFDQ9GZP0 370 aaPredicted RBP22.49■■□□□ 1.19
LIN28B-202ENST00000635857 CEMIPQ8WUJ3 1361 aa22.49■■□□□ 1.19
LIN28B-202ENST00000635857 SIPA1L3O60292 1781 aaPredicted RBP22.48■■□□□ 1.19
LIN28B-202ENST00000635857 SLC39A6Q13433 755 aa22.48■■□□□ 1.19
LIN28B-202ENST00000635857 ITPK1Q13572 414 aa22.48■■□□□ 1.19
LIN28B-202ENST00000635857 NFE2L2Q16236 605 aa22.48■■□□□ 1.19
LIN28B-202ENST00000635857 COL5A3P25940 1745 aaPredicted RBP22.48■■□□□ 1.19
LIN28B-202ENST00000635857 GNPATO15228 680 aa22.47■■□□□ 1.19
LIN28B-202ENST00000635857 MCM10Q7L590 875 aa22.47■■□□□ 1.19
LIN28B-202ENST00000635857 ATF5Q9Y2D1 282 aaPredicted RBP22.47■■□□□ 1.19
LIN28B-202ENST00000635857 UBR3Q6ZT12 1888 aa22.47■■□□□ 1.19
LIN28B-202ENST00000635857 PHF14O94880 888 aa22.46■■□□□ 1.19
LIN28B-202ENST00000635857 CICQ96RK0 1608 aaPredicted RBP22.46■■□□□ 1.19
LIN28B-202ENST00000635857 BTBD11A6QL63 1104 aa22.45■■□□□ 1.18
LIN28B-202ENST00000635857 SSFA2P28290 1259 aa22.45■■□□□ 1.18
LIN28B-202ENST00000635857 LMOD3Q0VAK6 560 aa22.45■■□□□ 1.18
LIN28B-202ENST00000635857 TJP1Q07157 1748 aa22.45■■□□□ 1.18
LIN28B-202ENST00000635857 UBR2Q8IWV8 1755 aa22.45■■□□□ 1.18
LIN28B-202ENST00000635857 POLD1P28340 1107 aa22.44■■□□□ 1.18
LIN28B-202ENST00000635857 ZNF790Q6PG37 636 aa22.44■■□□□ 1.18
LIN28B-202ENST00000635857 SLC4A9Q96Q91 983 aa22.44■■□□□ 1.18
LIN28B-202ENST00000635857 CNTNAP4Q9C0A0 1308 aa22.44■■□□□ 1.18
LIN28B-202ENST00000635857 RTCBQ9Y3I0 505 aaKnown RBP22.44■■□□□ 1.18
LIN28B-202ENST00000635857 KCPQ6ZWJ8 1503 aa22.43■■□□□ 1.18
LIN28B-202ENST00000635857 DCTN1Q14203 1278 aa22.43■■□□□ 1.18
LIN28B-202ENST00000635857 CCDC146Q8IYE0 955 aa22.43■■□□□ 1.18
LIN28B-202ENST00000635857 RUNDC1Q96C34 613 aa22.43■■□□□ 1.18
LIN28B-202ENST00000635857 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.42■■□□□ 1.18
LIN28B-202ENST00000635857 RC3H1Q5TC82 1133 aaKnown RBP22.42■■□□□ 1.18
LIN28B-202ENST00000635857 COL23A1Q86Y22 540 aaPredicted RBP22.42■■□□□ 1.18
LIN28B-202ENST00000635857 VSIG10Q8N0Z9 540 aa22.42■■□□□ 1.18
LIN28B-202ENST00000635857 ADAMTS8Q9UP79 889 aa22.42■■□□□ 1.18
LIN28B-202ENST00000635857 RIPK4P57078 832 aa22.41■■□□□ 1.18
LIN28B-202ENST00000635857 FMNL2Q96PY5 1086 aa22.41■■□□□ 1.18
LIN28B-202ENST00000635857 CRKLP46109 303 aaKnown RBP22.4■■□□□ 1.18
LIN28B-202ENST00000635857 PNISRQ8TF01 805 aaKnown RBP22.4■■□□□ 1.18
LIN28B-202ENST00000635857 MRS2Q9HD23 443 aa22.4■■□□□ 1.18
LIN28B-202ENST00000635857 ADRA2BP18089 450 aa22.39■■□□□ 1.17
LIN28B-202ENST00000635857 TAF7Q15545 349 aaPredicted RBP22.39■■□□□ 1.17
LIN28B-202ENST00000635857 TRAPPC3LQ5T215 181 aa22.39■■□□□ 1.17
LIN28B-202ENST00000635857 DNAJC10Q8IXB1 793 aa22.39■■□□□ 1.17
LIN28B-202ENST00000635857 TEX13AQ9BXU3 409 aaPredicted RBP22.39■■□□□ 1.17
LIN28B-202ENST00000635857 STARD3NLO95772 234 aa22.38■■□□□ 1.17
LIN28B-202ENST00000635857 TMPOP42166 694 aaKnown RBP22.38■■□□□ 1.17
LIN28B-202ENST00000635857 NEUROD2Q15784 382 aa22.38■■□□□ 1.17
LIN28B-202ENST00000635857 SRCAPQ6ZRS2 3230 aa22.38■■□□□ 1.17
LIN28B-202ENST00000635857 HEG1Q9ULI3 1381 aa22.38■■□□□ 1.17
LIN28B-202ENST00000635857 RPS6KA4O75676 772 aa22.37■■□□□ 1.17
LIN28B-202ENST00000635857 PTGER2P43116 358 aa22.37■■□□□ 1.17
LIN28B-202ENST00000635857 ZNF496Q96IT1 587 aaPredicted RBP22.37■■□□□ 1.17
LIN28B-202ENST00000635857 CCDC87Q9NVE4 849 aa22.37■■□□□ 1.17
LIN28B-202ENST00000635857 RFC4P35249 363 aa22.36■■□□□ 1.17
LIN28B-202ENST00000635857 ARXQ96QS3 562 aa22.36■■□□□ 1.17
LIN28B-202ENST00000635857 MSL1Q68DK7 614 aa22.35■■□□□ 1.17
LIN28B-202ENST00000635857 NPM2Q86SE8 214 aaKnown RBP22.35■■□□□ 1.17
LIN28B-202ENST00000635857 RRP7AQ9Y3A4 280 aaKnown RBP22.35■■□□□ 1.17
LIN28B-202ENST00000635857 MYH14Q7Z406 1995 aaKnown RBP22.35■■□□□ 1.17
LIN28B-202ENST00000635857 COL24A1Q17RW2 1714 aa22.34■■□□□ 1.17
LIN28B-202ENST00000635857 CYP19A1P11511 503 aaPredicted RBP22.33■■□□□ 1.17
LIN28B-202ENST00000635857 THUMPD2Q9BTF0 503 aaKnown RBP22.33■■□□□ 1.17
LIN28B-202ENST00000635857 SMIM5Q71RC9 77 aa22.32■■□□□ 1.16
LIN28B-202ENST00000635857 AMIGO3Q86WK7 504 aa22.32■■□□□ 1.16
LIN28B-202ENST00000635857 KLHL34Q8N239 644 aa22.32■■□□□ 1.16
LIN28B-202ENST00000635857 SGIP1Q9BQI5 828 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms