RNA–Protein interactions for RNA: ENST00000629650.2

PPM1D-204, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1D, humanhuman

TSL 5 BASIC

Gene PPM1D, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1D-204ENST00000629650 DCAF5Q96JK2 942 aa25.59■■□□□ 1.69
PPM1D-204ENST00000629650 MBIPQ9NS73 344 aa25.59■■□□□ 1.69
PPM1D-204ENST00000629650 TEFQ10587 303 aa25.58■■□□□ 1.69
PPM1D-204ENST00000629650 DEFB132Q7Z7B7 95 aa25.58■■□□□ 1.69
PPM1D-204ENST00000629650 SIPA1L3O60292 1781 aaPredicted RBP25.58■■□□□ 1.69
PPM1D-204ENST00000629650 CHL1O00533 1208 aa25.58■■□□□ 1.68
PPM1D-204ENST00000629650 SF3B2Q13435 895 aaKnown RBP25.58■■□□□ 1.68
PPM1D-204ENST00000629650 TAF7Q15545 349 aaPredicted RBP25.57■■□□□ 1.68
PPM1D-204ENST00000629650 DDB1Q16531 1140 aa25.56■■□□□ 1.68
PPM1D-204ENST00000629650 NKX1-1Q15270 411 aaPredicted RBP25.55■■□□□ 1.68
PPM1D-204ENST00000629650 EXOSC9Q06265 439 aaKnown RBP25.54■■□□□ 1.68
PPM1D-204ENST00000629650 MIS18AQ9NYP9 233 aa25.54■■□□□ 1.68
PPM1D-204ENST00000629650 TSPYL4Q9UJ04 414 aa25.54■■□□□ 1.68
PPM1D-204ENST00000629650 RCAN3Q9UKA8 241 aa25.54■■□□□ 1.68
PPM1D-204ENST00000629650 FAM196AQ6ZSG2 479 aa25.53■■□□□ 1.68
PPM1D-204ENST00000629650 BABAM1Q9NWV8 329 aa25.53■■□□□ 1.68
PPM1D-204ENST00000629650 MRC1P22897 1456 aa25.53■■□□□ 1.68
PPM1D-204ENST00000629650 KDM3BQ7LBC6 1761 aa25.53■■□□□ 1.68
PPM1D-204ENST00000629650 SLC52A2Q9HAB3 445 aa25.52■■□□□ 1.68
PPM1D-204ENST00000629650 TOGARAM1Q9Y4F4 1720 aa25.51■■□□□ 1.67
PPM1D-204ENST00000629650 TRIM37O94972 964 aa25.5■■□□□ 1.67
PPM1D-204ENST00000629650 BTBD11A6QL63 1104 aa25.49■■□□□ 1.67
PPM1D-204ENST00000629650 SUPT16HQ9Y5B9 1047 aaKnown RBP25.49■■□□□ 1.67
PPM1D-204ENST00000629650 CT47B1P0C2W7 299 aaPredicted RBP25.48■■□□□ 1.67
PPM1D-204ENST00000629650 CABP4P57796 275 aa25.48■■□□□ 1.67
PPM1D-204ENST00000629650 ERVV-2B6SEH9 535 aa25.47■■□□□ 1.67
PPM1D-204ENST00000629650 NFATC2IPQ8NCF5 419 aa25.47■■□□□ 1.67
PPM1D-204ENST00000629650 BAG6P46379 1132 aa25.47■■□□□ 1.67
PPM1D-204ENST00000629650 ITGB4P16144 1822 aa25.46■■□□□ 1.67
PPM1D-204ENST00000629650 DOT1LQ8TEK3 1739 aa25.45■■□□□ 1.67
PPM1D-204ENST00000629650 EN1Q05925 392 aaPredicted RBP25.45■■□□□ 1.66
PPM1D-204ENST00000629650 MARCH10Q8NA82 808 aaPredicted RBP25.45■■□□□ 1.66
PPM1D-204ENST00000629650 C8orf58Q8NAV2 365 aa25.45■■□□□ 1.66
PPM1D-204ENST00000629650 TWISTNBQ3B726 338 aaPredicted RBP25.44■■□□□ 1.66
PPM1D-204ENST00000629650 TNS1Q9HBL0 1735 aaKnown RBP25.44■■□□□ 1.66
PPM1D-204ENST00000629650 ELL2O00472 640 aaPredicted RBP25.43■■□□□ 1.66
PPM1D-204ENST00000629650 TSPYL6Q8N831 410 aa25.43■■□□□ 1.66
PPM1D-204ENST00000629650 KRT24Q2M2I5 525 aa25.42■■□□□ 1.66
PPM1D-204ENST00000629650 KCNQ3O43525 872 aa25.41■■□□□ 1.66
PPM1D-204ENST00000629650 VAMP4O75379 141 aa25.41■■□□□ 1.66
PPM1D-204ENST00000629650 APBA3O96018 575 aa25.41■■□□□ 1.66
PPM1D-204ENST00000629650 KAT6BQ8WYB5 2073 aa25.4■■□□□ 1.66
PPM1D-204ENST00000629650 RARSP54136 660 aaKnown RBP25.4■■□□□ 1.66
PPM1D-204ENST00000629650 TMOD3Q9NYL9 352 aa25.4■■□□□ 1.66
PPM1D-204ENST00000629650 PAPPAQ13219 1627 aa25.39■■□□□ 1.66
PPM1D-204ENST00000629650 EIF4A1P60842 406 aaKnown RBP25.39■■□□□ 1.66
PPM1D-204ENST00000629650 ZNF790Q6PG37 636 aa25.39■■□□□ 1.66
PPM1D-204ENST00000629650 ZNF428Q96B54 188 aa25.39■■□□□ 1.66
PPM1D-204ENST00000629650 SLC39A6Q13433 755 aa25.38■■□□□ 1.65
PPM1D-204ENST00000629650 SBF2Q86WG5 1849 aa25.38■■□□□ 1.65
PPM1D-204ENST00000629650 EZH2Q15910 746 aaKnown RBP25.37■■□□□ 1.65
PPM1D-204ENST00000629650 RNF123Q5XPI4 1314 aa25.37■■□□□ 1.65
PPM1D-204ENST00000629650 BCAR3O75815 825 aa25.37■■□□□ 1.65
PPM1D-204ENST00000629650 TTC5Q8N0Z6 440 aa25.37■■□□□ 1.65
PPM1D-204ENST00000629650 UBR2Q8IWV8 1755 aa25.36■■□□□ 1.65
PPM1D-204ENST00000629650 SOS1Q07889 1333 aaPredicted RBP25.35■■□□□ 1.65
PPM1D-204ENST00000629650 RRP1P56182 461 aaKnown RBP25.35■■□□□ 1.65
PPM1D-204ENST00000629650 ALDH1L2Q3SY69 923 aa25.35■■□□□ 1.65
PPM1D-204ENST00000629650 PTF1AQ7RTS3 328 aa25.35■■□□□ 1.65
PPM1D-204ENST00000629650 SYTL4Q96C24 671 aaPredicted RBP25.35■■□□□ 1.65
PPM1D-204ENST00000629650 CAMKK2Q96RR4 588 aa25.35■■□□□ 1.65
PPM1D-204ENST00000629650 BCL2L13Q9BXK5 485 aa25.35■■□□□ 1.65
PPM1D-204ENST00000629650 BCL9O00512 1426 aa25.34■■□□□ 1.65
PPM1D-204ENST00000629650 SSH1Q8WYL5 1049 aa25.34■■□□□ 1.65
PPM1D-204ENST00000629650 PIGBQ92521 554 aa25.34■■□□□ 1.65
PPM1D-204ENST00000629650 SMC4Q9NTJ3 1288 aa25.34■■□□□ 1.65
PPM1D-204ENST00000629650 PRIM1P49642 420 aaKnown RBP25.33■■□□□ 1.65
PPM1D-204ENST00000629650 HEG1Q9ULI3 1381 aa25.33■■□□□ 1.65
PPM1D-204ENST00000629650 ACSBG1Q96GR2 724 aa25.32■■□□□ 1.64
PPM1D-204ENST00000629650 NEFLP07196 543 aa25.32■■□□□ 1.64
PPM1D-204ENST00000629650 HOXB7P09629 217 aa25.31■■□□□ 1.64
PPM1D-204ENST00000629650 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.31■■□□□ 1.64
PPM1D-204ENST00000629650 ZNF496Q96IT1 587 aaPredicted RBP25.31■■□□□ 1.64
PPM1D-204ENST00000629650 C5P01031 1676 aa25.3■■□□□ 1.64
PPM1D-204ENST00000629650 FMNL2Q96PY5 1086 aa25.3■■□□□ 1.64
PPM1D-204ENST00000629650 KCPQ6ZWJ8 1503 aa25.3■■□□□ 1.64
PPM1D-204ENST00000629650 TCERG1O14776 1098 aaKnown RBP25.29■■□□□ 1.64
PPM1D-204ENST00000629650 PLIN1O60240 522 aa25.29■■□□□ 1.64
PPM1D-204ENST00000629650 GIGYF1O75420 1035 aaPredicted RBP25.29■■□□□ 1.64
PPM1D-204ENST00000629650 BCL11BQ9C0K0 894 aaPredicted RBP25.29■■□□□ 1.64
PPM1D-204ENST00000629650 FRAT1Q92837 279 aaPredicted RBP25.27■■□□□ 1.64
PPM1D-204ENST00000629650 ASAP1Q9ULH1 1129 aa25.27■■□□□ 1.64
PPM1D-204ENST00000629650 NHSQ6T4R5 1651 aa25.27■■□□□ 1.64
PPM1D-204ENST00000629650 KCNQ2O43526 872 aa25.27■■□□□ 1.64
PPM1D-204ENST00000629650 CANXP27824 592 aaKnown RBP25.27■■□□□ 1.64
PPM1D-204ENST00000629650 HDGFL1Q5TGJ6 251 aa25.27■■□□□ 1.64
PPM1D-204ENST00000629650 CCDC30Q5VVM6 783 aa25.27■■□□□ 1.64
PPM1D-204ENST00000629650 ATG3Q9NT62 314 aa25.27■■□□□ 1.64
PPM1D-204ENST00000629650 CACNA1FO60840 1977 aa25.26■■□□□ 1.63
PPM1D-204ENST00000629650 LAMB4A4D0S4 1761 aa25.26■■□□□ 1.63
PPM1D-204ENST00000629650 PSDA5PKW4 1024 aaPredicted RBP25.26■■□□□ 1.63
PPM1D-204ENST00000629650 BRPF1P55201 1214 aaPredicted RBP25.26■■□□□ 1.63
PPM1D-204ENST00000629650 IRX6P78412 446 aaPredicted RBP25.26■■□□□ 1.63
PPM1D-204ENST00000629650 MRPL50Q8N5N7 158 aaKnown RBP25.26■■□□□ 1.63
PPM1D-204ENST00000629650 CHMP4AQ9BY43 222 aa25.26■■□□□ 1.63
PPM1D-204ENST00000629650 KIF16BQ96L93 1317 aa25.25■■□□□ 1.63
PPM1D-204ENST00000629650 SNRPA1P09661 255 aaKnown RBP25.25■■□□□ 1.63
PPM1D-204ENST00000629650 EIF2S2P20042 333 aaKnown RBP25.25■■□□□ 1.63
PPM1D-204ENST00000629650 NECTIN2Q92692 538 aa25.25■■□□□ 1.63
PPM1D-204ENST00000629650 PRAMEF22A3QJZ6 481 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms