RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 UPF3BQ9BZI7 483 aaKnown RBP15.37■□□□□ 0.05
SYNGAP1-208ENST00000629380 KIF5CO60282 957 aa15.37■□□□□ 0.05
SYNGAP1-208ENST00000629380 ALS2CR12Q96Q35 445 aa15.37■□□□□ 0.05
SYNGAP1-208ENST00000629380 GSTTP1A0A1W2PQM5 241 aa15.36■□□□□ 0.05
SYNGAP1-208ENST00000629380 FKBP15Q5T1M5 1219 aa15.36■□□□□ 0.05
SYNGAP1-208ENST00000629380 NUTM2GQ5VZR2 741 aa15.36■□□□□ 0.05
SYNGAP1-208ENST00000629380 EHMT1Q9H9B1 1298 aa15.36■□□□□ 0.05
SYNGAP1-208ENST00000629380 PRXQ9BXM0 1461 aa15.36■□□□□ 0.05
SYNGAP1-208ENST00000629380 RBM5P52756 815 aaKnown RBP eCLIP15.36■□□□□ 0.05
SYNGAP1-208ENST00000629380 PRPF40AO75400 957 aaKnown RBP15.36■□□□□ 0.05
SYNGAP1-208ENST00000629380 ZSCAN31Q96LW9 406 aaPredicted RBP15.36■□□□□ 0.05
SYNGAP1-208ENST00000629380 AK9Q5TCS8 1911 aa15.36■□□□□ 0.05
SYNGAP1-208ENST00000629380 PEG3Q9GZU2 1588 aa15.36■□□□□ 0.05
SYNGAP1-208ENST00000629380 SURF6O75683 361 aaKnown RBP15.36■□□□□ 0.05
SYNGAP1-208ENST00000629380 CABP4P57796 275 aa15.35■□□□□ 0.05
SYNGAP1-208ENST00000629380 CCDC83Q8IWF9 413 aa15.35■□□□□ 0.05
SYNGAP1-208ENST00000629380 PANK1Q8TE04 598 aa15.35■□□□□ 0.05
SYNGAP1-208ENST00000629380 TDO2P48775 406 aa15.35■□□□□ 0.05
SYNGAP1-208ENST00000629380 TMOD2Q9NZR1 351 aa15.35■□□□□ 0.05
SYNGAP1-208ENST00000629380 SFPQP23246 707 aaKnown RBP eCLIP15.35■□□□□ 0.05
SYNGAP1-208ENST00000629380 PPM1FP49593 454 aaPredicted RBP15.35■□□□□ 0.05
SYNGAP1-208ENST00000629380 C6orf163Q5TEZ5 329 aa15.35■□□□□ 0.05
SYNGAP1-208ENST00000629380 RBM42Q9BTD8 480 aaKnown RBP15.35■□□□□ 0.05
SYNGAP1-208ENST00000629380 RAB34Q9BZG1 259 aa15.35■□□□□ 0.05
SYNGAP1-208ENST00000629380 TSNARE1Q96NA8 513 aa15.35■□□□□ 0.05
SYNGAP1-208ENST00000629380 CCDC175P0C221 793 aa15.34■□□□□ 0.05
SYNGAP1-208ENST00000629380 SPECC1LQ69YQ0 1117 aa15.34■□□□□ 0.05
SYNGAP1-208ENST00000629380 HMOX1P09601 288 aa15.34■□□□□ 0.05
SYNGAP1-208ENST00000629380 SSBP05455 408 aaKnown RBP eCLIP15.34■□□□□ 0.05
SYNGAP1-208ENST00000629380 NUP62CLQ9H1M0 184 aa15.34■□□□□ 0.05
SYNGAP1-208ENST00000629380 UBXN4Q92575 508 aa15.34■□□□□ 0.05
SYNGAP1-208ENST00000629380 TMEM132EQ6IEE7 984 aa15.33■□□□□ 0.05
SYNGAP1-208ENST00000629380 ITSN2Q9NZM3 1697 aa15.33■□□□□ 0.05
SYNGAP1-208ENST00000629380 LARP1BQ659C4 914 aaKnown RBP15.33■□□□□ 0.05
SYNGAP1-208ENST00000629380 PPP1R1BQ9UD71 204 aaPredicted RBP15.33■□□□□ 0.05
SYNGAP1-208ENST00000629380 CETN1Q12798 172 aa15.33■□□□□ 0.04
SYNGAP1-208ENST00000629380 NUP133Q8WUM0 1156 aa15.33■□□□□ 0.04
SYNGAP1-208ENST00000629380 PKNOX2Q96KN3 472 aa15.33■□□□□ 0.04
SYNGAP1-208ENST00000629380 CASQ1P31415 396 aa15.33■□□□□ 0.04
SYNGAP1-208ENST00000629380 CDK19Q9BWU1 502 aa15.33■□□□□ 0.04
SYNGAP1-208ENST00000629380 CIZ1Q9ULV3 898 aaPredicted RBP15.33■□□□□ 0.04
SYNGAP1-208ENST00000629380 COMMD10Q9Y6G5 202 aa15.32■□□□□ 0.04
SYNGAP1-208ENST00000629380 LRRC45Q96CN5 670 aa15.32■□□□□ 0.04
SYNGAP1-208ENST00000629380 DRC1Q96MC2 740 aa15.32■□□□□ 0.04
SYNGAP1-208ENST00000629380 SSX2IPQ9Y2D8 614 aa15.32■□□□□ 0.04
SYNGAP1-208ENST00000629380 FAM177A1Q8N128 213 aaPredicted RBP15.32■□□□□ 0.04
SYNGAP1-208ENST00000629380 MAP3K11Q16584 847 aa15.32■□□□□ 0.04
SYNGAP1-208ENST00000629380 NAA15Q9BXJ9 866 aaKnown RBP15.31■□□□□ 0.04
SYNGAP1-208ENST00000629380 K7ELQ4 463 aaPredicted RBP15.31■□□□□ 0.04
SYNGAP1-208ENST00000629380 KIF20AO95235 890 aa15.31■□□□□ 0.04
SYNGAP1-208ENST00000629380 SCLT1Q96NL6 688 aa15.31■□□□□ 0.04
SYNGAP1-208ENST00000629380 KDM4AO75164 1064 aa15.31■□□□□ 0.04
SYNGAP1-208ENST00000629380 U3KPZ7 1027 aaPredicted RBP15.31■□□□□ 0.04
SYNGAP1-208ENST00000629380 EHBP1Q8NDI1 1231 aa15.31■□□□□ 0.04
SYNGAP1-208ENST00000629380 ARHGEF11O15085 1522 aa15.31■□□□□ 0.04
SYNGAP1-208ENST00000629380 IKBKGQ9Y6K9 419 aa15.31■□□□□ 0.04
SYNGAP1-208ENST00000629380 TTC21AQ8NDW8 1320 aa15.3■□□□□ 0.04
SYNGAP1-208ENST00000629380 CCDC196A0A1B0GTZ2 297 aa15.3■□□□□ 0.04
SYNGAP1-208ENST00000629380 GOPCQ9HD26 462 aa15.3■□□□□ 0.04
SYNGAP1-208ENST00000629380 KIF18AQ8NI77 898 aa15.3■□□□□ 0.04
SYNGAP1-208ENST00000629380 CCDC113Q9H0I3 377 aa15.3■□□□□ 0.04
SYNGAP1-208ENST00000629380 TMEM266Q2M3C6 531 aa15.3■□□□□ 0.04
SYNGAP1-208ENST00000629380 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.3■□□□□ 0.04
SYNGAP1-208ENST00000629380 V9GYY5 206 aaPredicted RBP15.3■□□□□ 0.04
SYNGAP1-208ENST00000629380 GGNBP2Q9H3C7 697 aa15.3■□□□□ 0.04
SYNGAP1-208ENST00000629380 CAMSAP2Q08AD1 1489 aa15.3■□□□□ 0.04
SYNGAP1-208ENST00000629380 ARAP1Q96P48 1450 aa15.3■□□□□ 0.04
SYNGAP1-208ENST00000629380 ZWINTO95229 277 aa15.3■□□□□ 0.04
SYNGAP1-208ENST00000629380 FANCAO15360 1455 aa15.3■□□□□ 0.04
SYNGAP1-208ENST00000629380 SPDYE4A6NLX3 237 aa15.29■□□□□ 0.04
SYNGAP1-208ENST00000629380 CTNNA2P26232 953 aa15.29■□□□□ 0.04
SYNGAP1-208ENST00000629380 ZNF652Q9Y2D9 606 aa15.29■□□□□ 0.04
SYNGAP1-208ENST00000629380 FSD2A1L4K1 749 aa15.29■□□□□ 0.04
SYNGAP1-208ENST00000629380 CUL5Q93034 780 aa15.29■□□□□ 0.04
SYNGAP1-208ENST00000629380 CFAP100Q494V2 611 aa15.29■□□□□ 0.04
SYNGAP1-208ENST00000629380 BLOC1S2Q6QNY1 142 aa15.29■□□□□ 0.04
SYNGAP1-208ENST00000629380 CCDC178Q5BJE1 867 aa15.29■□□□□ 0.04
SYNGAP1-208ENST00000629380 LARP1Q6PKG0 1096 aaKnown RBP15.29■□□□□ 0.04
SYNGAP1-208ENST00000629380 FAM114A1Q8IWE2 563 aa15.29■□□□□ 0.04
SYNGAP1-208ENST00000629380 TMEM87AQ8NBN3 555 aa15.29■□□□□ 0.04
SYNGAP1-208ENST00000629380 ERICH4A6NGS2 130 aa15.28■□□□□ 0.04
SYNGAP1-208ENST00000629380 CALCOCO1Q9P1Z2 691 aa15.28■□□□□ 0.04
SYNGAP1-208ENST00000629380 MYO10Q9HD67 2058 aa15.28■□□□□ 0.04
SYNGAP1-208ENST00000629380 CFAP70Q5T0N1 1121 aa15.28■□□□□ 0.04
SYNGAP1-208ENST00000629380 FERMT2Q96AC1 680 aa15.28■□□□□ 0.04
SYNGAP1-208ENST00000629380 CGNQ9P2M7 1197 aaKnown RBP15.28■□□□□ 0.04
SYNGAP1-208ENST00000629380 USO1O60763 962 aaKnown RBP15.28■□□□□ 0.04
SYNGAP1-208ENST00000629380 A0A087WZG4 1122 aa15.28■□□□□ 0.04
SYNGAP1-208ENST00000629380 MPHOSPH6Q99547 160 aaKnown RBP15.28■□□□□ 0.04
SYNGAP1-208ENST00000629380 PIBF1Q8WXW3 757 aa15.28■□□□□ 0.04
SYNGAP1-208ENST00000629380 PDRG1Q9NUG6 133 aa15.28■□□□□ 0.04
SYNGAP1-208ENST00000629380 PDE3AQ14432 1141 aa15.27■□□□□ 0.04
SYNGAP1-208ENST00000629380 PYM1Q9BRP8 204 aaKnown RBP15.27■□□□□ 0.04
SYNGAP1-208ENST00000629380 GRPEL1Q9HAV7 217 aa15.27■□□□□ 0.04
SYNGAP1-208ENST00000629380 UBE4AQ14139 1066 aa15.27■□□□□ 0.04
SYNGAP1-208ENST00000629380 CTNNBL1Q8WYA6 563 aaPredicted RBP15.27■□□□□ 0.04
SYNGAP1-208ENST00000629380 CDK13Q14004 1512 aaKnown RBP15.27■□□□□ 0.04
SYNGAP1-208ENST00000629380 AACSQ86V21 672 aa15.27■□□□□ 0.04
SYNGAP1-208ENST00000629380 CEP112Q8N8E3 955 aa15.27■□□□□ 0.03
SYNGAP1-208ENST00000629380 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.27■□□□□ 0.034e-6■■■■□ 23.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms