RNA–Protein interactions for RNA: ENST00000628881.1

PFDN5-220, Transcript of prefoldin subunit 5, humanhuman

TSL 3 BASIC

Gene PFDN5, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-220ENST00000628881 SLC15A2Q16348 729 aa18.15■□□□□ 0.5
PFDN5-220ENST00000628881 C5P01031 1676 aa18.15■□□□□ 0.5
PFDN5-220ENST00000628881 HMGB2P26583 209 aaKnown RBP18.14■□□□□ 0.49
PFDN5-220ENST00000628881 WDR43Q15061 677 aaKnown RBP eCLIP18.14■□□□□ 0.49
PFDN5-220ENST00000628881 TAF1LQ8IZX4 1826 aa18.14■□□□□ 0.49
PFDN5-220ENST00000628881 LOC102724428A0A0B4J2F2 783 aa18.13■□□□□ 0.49
PFDN5-220ENST00000628881 SIK1P57059 783 aa18.13■□□□□ 0.49
PFDN5-220ENST00000628881 ZNF827Q17R98 1081 aa18.13■□□□□ 0.49
PFDN5-220ENST00000628881 IL17REQ8NFR9 667 aa18.13■□□□□ 0.49
PFDN5-220ENST00000628881 MAPK8IP3Q9UPT6 1336 aa18.13■□□□□ 0.49
PFDN5-220ENST00000628881 CEMIPQ8WUJ3 1361 aa18.13■□□□□ 0.49
PFDN5-220ENST00000628881 AKT1S1Q96B36 256 aa18.12■□□□□ 0.49
PFDN5-220ENST00000628881 ZNF831Q5JPB2 1677 aa18.12■□□□□ 0.49
PFDN5-220ENST00000628881 SIPA1L3O60292 1781 aaPredicted RBP18.12■□□□□ 0.49
PFDN5-220ENST00000628881 HTATSF1O43719 755 aaKnown RBP18.11■□□□□ 0.49
PFDN5-220ENST00000628881 RTF1Q92541 710 aaKnown RBP18.11■□□□□ 0.49
PFDN5-220ENST00000628881 QSER1Q2KHR3 1735 aa18.11■□□□□ 0.49
PFDN5-220ENST00000628881 CASZ1Q86V15 1759 aa18.11■□□□□ 0.49
PFDN5-220ENST00000628881 DLG5Q8TDM6 1919 aa18.1■□□□□ 0.49
PFDN5-220ENST00000628881 TEFQ10587 303 aa18.1■□□□□ 0.49
PFDN5-220ENST00000628881 NFE2L2Q16236 605 aa18.1■□□□□ 0.49
PFDN5-220ENST00000628881 C4BP0C0L5 1744 aa18.09■□□□□ 0.49
PFDN5-220ENST00000628881 ATP6V1AP38606 617 aa18.09■□□□□ 0.49
PFDN5-220ENST00000628881 RBM42Q9BTD8 480 aaKnown RBP18.09■□□□□ 0.49
PFDN5-220ENST00000628881 ADAMTS8Q9UP79 889 aa18.09■□□□□ 0.49
PFDN5-220ENST00000628881 TUBGCP6Q96RT7 1819 aa18.09■□□□□ 0.49
PFDN5-220ENST00000628881 CCDC184Q52MB2 194 aa18.08■□□□□ 0.48
PFDN5-220ENST00000628881 CICQ96RK0 1608 aaPredicted RBP18.08■□□□□ 0.48
PFDN5-220ENST00000628881 ITPK1Q13572 414 aa18.07■□□□□ 0.48
PFDN5-220ENST00000628881 MCM10Q7L590 875 aa18.07■□□□□ 0.48
PFDN5-220ENST00000628881 LINC00116Q8NCU8 138 aa18.07■□□□□ 0.48
PFDN5-220ENST00000628881 SLC4A9Q96Q91 983 aa18.07■□□□□ 0.48
PFDN5-220ENST00000628881 TFCP2L1Q9NZI6 479 aa18.07■□□□□ 0.48
PFDN5-220ENST00000628881 LRP5O75197 1615 aa18.07■□□□□ 0.48
PFDN5-220ENST00000628881 UBR2Q8IWV8 1755 aa18.07■□□□□ 0.48
PFDN5-220ENST00000628881 PTCD1O75127 700 aaKnown RBP18.06■□□□□ 0.48
PFDN5-220ENST00000628881 SLC39A6Q13433 755 aa18.06■□□□□ 0.48
PFDN5-220ENST00000628881 CCDC146Q8IYE0 955 aa18.06■□□□□ 0.48
PFDN5-220ENST00000628881 RUNDC1Q96C34 613 aa18.06■□□□□ 0.48
PFDN5-220ENST00000628881 KCPQ6ZWJ8 1503 aa18.06■□□□□ 0.48
PFDN5-220ENST00000628881 COL5A3P25940 1745 aaPredicted RBP18.06■□□□□ 0.48
PFDN5-220ENST00000628881 DCTN1Q14203 1278 aa18.05■□□□□ 0.48
PFDN5-220ENST00000628881 PDGFDQ9GZP0 370 aaPredicted RBP18.05■□□□□ 0.48
PFDN5-220ENST00000628881 TJP1Q07157 1748 aa18.05■□□□□ 0.48
PFDN5-220ENST00000628881 PNPLA7Q6ZV29 1317 aa18.04■□□□□ 0.48
PFDN5-220ENST00000628881 TMPOP42166 694 aaKnown RBP18.04■□□□□ 0.48
PFDN5-220ENST00000628881 TTC5Q8N0Z6 440 aa18.04■□□□□ 0.48
PFDN5-220ENST00000628881 AK7Q96M32 723 aa18.04■□□□□ 0.48
PFDN5-220ENST00000628881 MRS2Q9HD23 443 aa18.04■□□□□ 0.48
PFDN5-220ENST00000628881 ZNF790Q6PG37 636 aa18.03■□□□□ 0.48
PFDN5-220ENST00000628881 UBR3Q6ZT12 1888 aa18.03■□□□□ 0.48
PFDN5-220ENST00000628881 BTBD11A6QL63 1104 aa18.02■□□□□ 0.48
PFDN5-220ENST00000628881 RIPK4P57078 832 aa18.02■□□□□ 0.48
PFDN5-220ENST00000628881 CNTNAP4Q9C0A0 1308 aa18.01■□□□□ 0.47
PFDN5-220ENST00000628881 LMOD3Q0VAK6 560 aa18.01■□□□□ 0.47
PFDN5-220ENST00000628881 VSIG10Q8N0Z9 540 aa18.01■□□□□ 0.47
PFDN5-220ENST00000628881 PNISRQ8TF01 805 aaKnown RBP18.01■□□□□ 0.47
PFDN5-220ENST00000628881 ZBTB7AO95365 584 aa18■□□□□ 0.47
PFDN5-220ENST00000628881 TAF7Q15545 349 aaPredicted RBP18■□□□□ 0.47
PFDN5-220ENST00000628881 RC3H1Q5TC82 1133 aaKnown RBP18■□□□□ 0.47
PFDN5-220ENST00000628881 FLAD1Q8NFF5 587 aa18■□□□□ 0.47
PFDN5-220ENST00000628881 SPON1Q9HCB6 807 aa18■□□□□ 0.47
PFDN5-220ENST00000628881 RRP7AQ9Y3A4 280 aaKnown RBP18■□□□□ 0.47
PFDN5-220ENST00000628881 SRCAPQ6ZRS2 3230 aa17.99■□□□□ 0.47
PFDN5-220ENST00000628881 GNPATO15228 680 aa17.99■□□□□ 0.47
PFDN5-220ENST00000628881 SSFA2P28290 1259 aa17.99■□□□□ 0.47
PFDN5-220ENST00000628881 DNAJC10Q8IXB1 793 aa17.99■□□□□ 0.47
PFDN5-220ENST00000628881 SLC16A10Q8TF71 515 aa17.99■□□□□ 0.47
PFDN5-220ENST00000628881 ZNF496Q96IT1 587 aaPredicted RBP17.99■□□□□ 0.47
PFDN5-220ENST00000628881 THUMPD2Q9BTF0 503 aaKnown RBP17.99■□□□□ 0.47
PFDN5-220ENST00000628881 MTFR1LQ9H019 292 aa17.99■□□□□ 0.47
PFDN5-220ENST00000628881 AMIGO3Q86WK7 504 aa17.98■□□□□ 0.47
PFDN5-220ENST00000628881 COL23A1Q86Y22 540 aaPredicted RBP17.98■□□□□ 0.47
PFDN5-220ENST00000628881 FMNL2Q96PY5 1086 aa17.98■□□□□ 0.47
PFDN5-220ENST00000628881 HEG1Q9ULI3 1381 aa17.98■□□□□ 0.47
PFDN5-220ENST00000628881 MYH14Q7Z406 1995 aaKnown RBP17.98■□□□□ 0.47
PFDN5-220ENST00000628881 KDM3BQ7LBC6 1761 aa17.97■□□□□ 0.47
PFDN5-220ENST00000628881 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.97■□□□□ 0.47
PFDN5-220ENST00000628881 KCNQ3O43525 872 aa17.97■□□□□ 0.47
PFDN5-220ENST00000628881 CRKLP46109 303 aaKnown RBP17.97■□□□□ 0.47
PFDN5-220ENST00000628881 NEUROD2Q15784 382 aa17.97■□□□□ 0.47
PFDN5-220ENST00000628881 APAF1O14727 1248 aa17.96■□□□□ 0.47
PFDN5-220ENST00000628881 MSH5O43196 834 aa17.96■□□□□ 0.47
PFDN5-220ENST00000628881 PHF14O94880 888 aa17.96■□□□□ 0.47
PFDN5-220ENST00000628881 TRIM35Q9UPQ4 493 aa17.96■□□□□ 0.47
PFDN5-220ENST00000628881 ATF5Q9Y2D1 282 aaPredicted RBP17.96■□□□□ 0.47
PFDN5-220ENST00000628881 RTCBQ9Y3I0 505 aaKnown RBP17.96■□□□□ 0.47
PFDN5-220ENST00000628881 COL24A1Q17RW2 1714 aa17.95■□□□□ 0.46
PFDN5-220ENST00000628881 RPS6KA4O75676 772 aa17.95■□□□□ 0.46
PFDN5-220ENST00000628881 CYP19A1P11511 503 aaPredicted RBP17.95■□□□□ 0.46
PFDN5-220ENST00000628881 ADRA2BP18089 450 aa17.94■□□□□ 0.46
PFDN5-220ENST00000628881 PTGER2P43116 358 aa17.94■□□□□ 0.46
PFDN5-220ENST00000628881 INTS5Q6P9B9 1019 aaKnown RBP17.94■□□□□ 0.46
PFDN5-220ENST00000628881 SMIM5Q71RC9 77 aa17.94■□□□□ 0.46
PFDN5-220ENST00000628881 TEX13AQ9BXU3 409 aaPredicted RBP17.94■□□□□ 0.46
PFDN5-220ENST00000628881 CCDC87Q9NVE4 849 aa17.94■□□□□ 0.46
PFDN5-220ENST00000628881 MIS18AQ9NYP9 233 aa17.94■□□□□ 0.46
PFDN5-220ENST00000628881 STARD3NLO95772 234 aa17.93■□□□□ 0.46
PFDN5-220ENST00000628881 SGIP1Q9BQI5 828 aa17.93■□□□□ 0.46
PFDN5-220ENST00000628881 TRAPPC3LQ5T215 181 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms