RNA–Protein interactions for RNA: ENST00000628597.1

SCARNA4.1-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 123 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4.1-201ENST00000628597 LRRC37A3O60309 1634 aa4.82□□□□□ -1.64
SCARNA4.1-201ENST00000628597 CEP290O15078 2479 aa4.82□□□□□ -1.64
SCARNA4.1-201ENST00000628597 FMN2Q9NZ56 1722 aa4.81□□□□□ -1.64
SCARNA4.1-201ENST00000628597 RPTORQ8N122 1335 aa4.81□□□□□ -1.64
SCARNA4.1-201ENST00000628597 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.81□□□□□ -1.64
SCARNA4.1-201ENST00000628597 EPHX2P34913 555 aa4.81□□□□□ -1.64
SCARNA4.1-201ENST00000628597 SAPCD2Q86UD0 394 aa4.81□□□□□ -1.64
SCARNA4.1-201ENST00000628597 NLGN1Q8N2Q7 840 aa4.81□□□□□ -1.64
SCARNA4.1-201ENST00000628597 HHIPL1Q96JK4 782 aa4.81□□□□□ -1.64
SCARNA4.1-201ENST00000628597 CARD10Q9BWT7 1032 aa4.81□□□□□ -1.64
SCARNA4.1-201ENST00000628597 NR2E3Q9Y5X4 410 aa4.81□□□□□ -1.64
SCARNA4.1-201ENST00000628597 SZT2Q5T011 3432 aa4.81□□□□□ -1.64
SCARNA4.1-201ENST00000628597 LTBP1Q14766 1721 aa4.8□□□□□ -1.64
SCARNA4.1-201ENST00000628597 QSER1Q2KHR3 1735 aa4.8□□□□□ -1.64
SCARNA4.1-201ENST00000628597 CPDO75976 1380 aa4.8□□□□□ -1.64
SCARNA4.1-201ENST00000628597 TJAP1Q5JTD0 557 aa4.8□□□□□ -1.64
SCARNA4.1-201ENST00000628597 SYNE4Q8N205 404 aa4.8□□□□□ -1.64
SCARNA4.1-201ENST00000628597 COL5A2P05997 1499 aaPredicted RBP4.8□□□□□ -1.64
SCARNA4.1-201ENST00000628597 PKD1L3Q7Z443 1732 aa4.8□□□□□ -1.64
SCARNA4.1-201ENST00000628597 KDM6AO15550 1401 aaPredicted RBP4.8□□□□□ -1.64
SCARNA4.1-201ENST00000628597 MYO5BQ9ULV0 1848 aa4.79□□□□□ -1.64
SCARNA4.1-201ENST00000628597 ERBB3P21860 1342 aa4.79□□□□□ -1.64
SCARNA4.1-201ENST00000628597 WDR17Q8IZU2 1322 aa4.79□□□□□ -1.64
SCARNA4.1-201ENST00000628597 TTC21AQ8NDW8 1320 aa4.79□□□□□ -1.64
SCARNA4.1-201ENST00000628597 GCP02774 474 aa4.79□□□□□ -1.64
SCARNA4.1-201ENST00000628597 SSFA2P28290 1259 aa4.79□□□□□ -1.64
SCARNA4.1-201ENST00000628597 PRIM1P49642 420 aaKnown RBP4.79□□□□□ -1.64
SCARNA4.1-201ENST00000628597 TMF1P82094 1093 aa4.79□□□□□ -1.64
SCARNA4.1-201ENST00000628597 CST9Q5W186 159 aa4.79□□□□□ -1.64
SCARNA4.1-201ENST00000628597 BICDL1Q6ZP65 573 aa4.79□□□□□ -1.64
SCARNA4.1-201ENST00000628597 ABTB2Q8N961 1025 aa4.79□□□□□ -1.64
SCARNA4.1-201ENST00000628597 L3MBTL3Q96JM7 780 aaPredicted RBP4.79□□□□□ -1.64
SCARNA4.1-201ENST00000628597 DACH1Q9UI36 760 aa4.79□□□□□ -1.64
SCARNA4.1-201ENST00000628597 TAOK2Q9UL54 1235 aa4.79□□□□□ -1.64
SCARNA4.1-201ENST00000628597 NSD3Q9BZ95 1437 aa4.79□□□□□ -1.64
SCARNA4.1-201ENST00000628597 NRXN3Q9Y4C0 1643 aa4.79□□□□□ -1.64
SCARNA4.1-201ENST00000628597 USP47Q96K76 1375 aa4.78□□□□□ -1.64
SCARNA4.1-201ENST00000628597 CACNA1BQ00975 2339 aa4.78□□□□□ -1.64
SCARNA4.1-201ENST00000628597 CELF2O95319 508 aaKnown RBP4.78□□□□□ -1.64
SCARNA4.1-201ENST00000628597 CHRNA5P30532 468 aa4.78□□□□□ -1.64
SCARNA4.1-201ENST00000628597 KIF23Q02241 960 aaPredicted RBP4.78□□□□□ -1.64
SCARNA4.1-201ENST00000628597 NLRP13Q86W25 1043 aa4.78□□□□□ -1.64
SCARNA4.1-201ENST00000628597 DDX54Q8TDD1 881 aaKnown RBP4.78□□□□□ -1.64
SCARNA4.1-201ENST00000628597 ZIC5Q96T25 663 aa4.78□□□□□ -1.64
SCARNA4.1-201ENST00000628597 BAHCC1Q9P281 2608 aa4.78□□□□□ -1.64
SCARNA4.1-201ENST00000628597 TRPM1Q7Z4N2 1603 aa4.78□□□□□ -1.64
SCARNA4.1-201ENST00000628597 KRT37O76014 449 aa4.77□□□□□ -1.65
SCARNA4.1-201ENST00000628597 FMR1Q06787 632 aaKnown RBP eCLIP4.77□□□□□ -1.65
SCARNA4.1-201ENST00000628597 ZNF296Q8WUU4 475 aaPredicted RBP4.77□□□□□ -1.65
SCARNA4.1-201ENST00000628597 PRO3102Q9H379 93 aa4.77□□□□□ -1.65
SCARNA4.1-201ENST00000628597 COL18A1P39060 1754 aa4.77□□□□□ -1.65
SCARNA4.1-201ENST00000628597 CCDC7Q96M83 1385 aa4.77□□□□□ -1.65
SCARNA4.1-201ENST00000628597 PLEKHH1Q9ULM0 1364 aa4.77□□□□□ -1.65
SCARNA4.1-201ENST00000628597 COL6A3P12111 3177 aa4.76□□□□□ -1.65
SCARNA4.1-201ENST00000628597 KAT6BQ8WYB5 2073 aa4.76□□□□□ -1.65
SCARNA4.1-201ENST00000628597 TRAF5O00463 557 aa4.76□□□□□ -1.65
SCARNA4.1-201ENST00000628597 RGS20O76081 388 aa4.76□□□□□ -1.65
SCARNA4.1-201ENST00000628597 IL2RBP14784 551 aa4.76□□□□□ -1.65
SCARNA4.1-201ENST00000628597 SLC4A8Q2Y0W8 1093 aa4.76□□□□□ -1.65
SCARNA4.1-201ENST00000628597 REM2Q8IYK8 340 aaPredicted RBP4.76□□□□□ -1.65
SCARNA4.1-201ENST00000628597 TTLL6Q8N841 843 aa4.76□□□□□ -1.65
SCARNA4.1-201ENST00000628597 CCDC102AQ96A19 550 aa4.76□□□□□ -1.65
SCARNA4.1-201ENST00000628597 ZNF408Q9H9D4 720 aa4.76□□□□□ -1.65
SCARNA4.1-201ENST00000628597 THSD7BQ9C0I4 1608 aa4.75□□□□□ -1.65
SCARNA4.1-201ENST00000628597 IRS2Q9Y4H2 1338 aa4.75□□□□□ -1.65
SCARNA4.1-201ENST00000628597 KIAA0100Q14667 2235 aaKnown RBP4.75□□□□□ -1.65
SCARNA4.1-201ENST00000628597 NFKBIEO00221 500 aa4.75□□□□□ -1.65
SCARNA4.1-201ENST00000628597 LMOD1P29536 600 aaPredicted RBP4.75□□□□□ -1.65
SCARNA4.1-201ENST00000628597 HUNKP57058 714 aa4.75□□□□□ -1.65
SCARNA4.1-201ENST00000628597 COL9A2Q14055 689 aaPredicted RBP4.75□□□□□ -1.65
SCARNA4.1-201ENST00000628597 SAFB2Q14151 953 aaKnown RBP eCLIP4.75□□□□□ -1.65
SCARNA4.1-201ENST00000628597 MAFAQ8NHW3 353 aaPredicted RBP4.75□□□□□ -1.65
SCARNA4.1-201ENST00000628597 HTATIP2Q9BUP3 242 aa4.75□□□□□ -1.65
SCARNA4.1-201ENST00000628597 NHSQ6T4R5 1651 aa4.75□□□□□ -1.65
SCARNA4.1-201ENST00000628597 MUC6Q6W4X9 2439 aa4.75□□□□□ -1.65
SCARNA4.1-201ENST00000628597 CEP162Q5TB80 1403 aa4.74□□□□□ -1.65
SCARNA4.1-201ENST00000628597 TRAPPC3LQ5T215 181 aa4.74□□□□□ -1.65
SCARNA4.1-201ENST00000628597 RGMBQ6NW40 437 aa4.74□□□□□ -1.65
SCARNA4.1-201ENST00000628597 IL27Q8NEV9 243 aa4.74□□□□□ -1.65
SCARNA4.1-201ENST00000628597 SIRT1Q96EB6 747 aa4.74□□□□□ -1.65
SCARNA4.1-201ENST00000628597 LRFN3Q9BTN0 628 aa4.74□□□□□ -1.65
SCARNA4.1-201ENST00000628597 TAOK3Q9H2K8 898 aa4.74□□□□□ -1.65
SCARNA4.1-201ENST00000628597 POGKQ9P215 609 aa4.74□□□□□ -1.65
SCARNA4.1-201ENST00000628597 STAP2Q9UGK3 403 aa4.74□□□□□ -1.65
SCARNA4.1-201ENST00000628597 ABCC11Q96J66 1382 aa4.74□□□□□ -1.65
SCARNA4.1-201ENST00000628597 ATRXP46100 2492 aa4.73□□□□□ -1.65
SCARNA4.1-201ENST00000628597 PPIP5K1Q6PFW1 1433 aa4.73□□□□□ -1.65
SCARNA4.1-201ENST00000628597 ANKARQ7Z5J8 1434 aa4.73□□□□□ -1.65
SCARNA4.1-201ENST00000628597 GPR25O00155 361 aa4.73□□□□□ -1.65
SCARNA4.1-201ENST00000628597 GNPATO15228 680 aa4.73□□□□□ -1.65
SCARNA4.1-201ENST00000628597 FKTNO75072 461 aa4.73□□□□□ -1.65
SCARNA4.1-201ENST00000628597 TBC1D8O95759 1140 aa4.73□□□□□ -1.65
SCARNA4.1-201ENST00000628597 LRIT3Q3SXY7 679 aa4.73□□□□□ -1.65
SCARNA4.1-201ENST00000628597 TMEM31Q5JXX7 168 aa4.73□□□□□ -1.65
SCARNA4.1-201ENST00000628597 CSRNP1Q96S65 589 aa4.73□□□□□ -1.65
SCARNA4.1-201ENST00000628597 NLRP2Q9NX02 1062 aa4.73□□□□□ -1.65
SCARNA4.1-201ENST00000628597 CHIC2Q9UKJ5 165 aa4.73□□□□□ -1.65
SCARNA4.1-201ENST00000628597 TRIM17Q9Y577 477 aa4.73□□□□□ -1.65
SCARNA4.1-201ENST00000628597 RNF123Q5XPI4 1314 aa4.72□□□□□ -1.65
SCARNA4.1-201ENST00000628597 CLTCL1P53675 1640 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms