RNA–Protein interactions for RNA: ENST00000622827.4

CDH23-214, Transcript of cadherin related 23, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDH23, Length 11,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-214ENST00000622827 SOGA3Q5TF21 947 aa16.76■□□□□ 0.27
CDH23-214ENST00000622827 TMX1Q9H3N1 280 aa16.76■□□□□ 0.27
CDH23-214ENST00000622827 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.76■□□□□ 0.27
CDH23-214ENST00000622827 SMARCA4P51532 1647 aa16.76■□□□□ 0.27
CDH23-214ENST00000622827 TSR2Q969E8 191 aaKnown RBP16.76■□□□□ 0.27
CDH23-214ENST00000622827 SIL1Q9H173 461 aa16.76■□□□□ 0.27
CDH23-214ENST00000622827 CTAGE5O15320 804 aa16.76■□□□□ 0.27
CDH23-214ENST00000622827 ADCY5O95622 1261 aa16.76■□□□□ 0.27
CDH23-214ENST00000622827 SPECC1Q5M775 1068 aa16.75■□□□□ 0.27
CDH23-214ENST00000622827 TWISTNBQ3B726 338 aaPredicted RBP16.75■□□□□ 0.27
CDH23-214ENST00000622827 GOLGA6L9A6NEM1 432 aa16.75■□□□□ 0.27
CDH23-214ENST00000622827 FGFR1OPO95684 399 aaKnown RBP16.75■□□□□ 0.27
CDH23-214ENST00000622827 BCAR3O75815 825 aa16.75■□□□□ 0.27
CDH23-214ENST00000622827 TRIM21P19474 475 aaKnown RBP16.75■□□□□ 0.27
CDH23-214ENST00000622827 LIG1P18858 919 aa16.75■□□□□ 0.27
CDH23-214ENST00000622827 USO1O60763 962 aaKnown RBP16.75■□□□□ 0.27
CDH23-214ENST00000622827 RAPGEF4Q8WZA2 1011 aa16.74■□□□□ 0.27
CDH23-214ENST00000622827 CNNM1Q9NRU3 951 aa16.74■□□□□ 0.27
CDH23-214ENST00000622827 CTNNA3Q9UI47 895 aa16.74■□□□□ 0.27
CDH23-214ENST00000622827 DAAM2Q86T65 1068 aa16.74■□□□□ 0.27
CDH23-214ENST00000622827 USP25Q9UHP3 1055 aa16.74■□□□□ 0.27
CDH23-214ENST00000622827 MACROD2A1Z1Q3 448 aa16.74■□□□□ 0.27
CDH23-214ENST00000622827 CACNA2D4Q7Z3S7 1137 aa16.74■□□□□ 0.27
CDH23-214ENST00000622827 TSG101Q99816 390 aa16.74■□□□□ 0.27
CDH23-214ENST00000622827 MTHFSP49914 203 aa16.74■□□□□ 0.27
CDH23-214ENST00000622827 SEPT6Q14141 434 aa16.74■□□□□ 0.27
CDH23-214ENST00000622827 YEATS4O95619 227 aa16.73■□□□□ 0.27
CDH23-214ENST00000622827 TDO2P48775 406 aa16.73■□□□□ 0.27
CDH23-214ENST00000622827 CCDC171Q6TFL3 1326 aa16.73■□□□□ 0.27
CDH23-214ENST00000622827 TTC31Q49AM3 519 aaPredicted RBP16.73■□□□□ 0.27
CDH23-214ENST00000622827 FSD2A1L4K1 749 aa16.73■□□□□ 0.27
CDH23-214ENST00000622827 SH2B1Q9NRF2 756 aaPredicted RBP16.73■□□□□ 0.27
CDH23-214ENST00000622827 EXOSC9Q06265 439 aaKnown RBP16.73■□□□□ 0.27
CDH23-214ENST00000622827 TMC6Q7Z403 805 aa16.73■□□□□ 0.27
CDH23-214ENST00000622827 HSF2BPO75031 334 aa16.73■□□□□ 0.27
CDH23-214ENST00000622827 PPP2R1AP30153 589 aa16.73■□□□□ 0.27
CDH23-214ENST00000622827 GAS2L2Q8NHY3 880 aa16.72■□□□□ 0.27
CDH23-214ENST00000622827 NSRP1Q9H0G5 558 aaKnown RBP16.72■□□□□ 0.27
CDH23-214ENST00000622827 CLGNO14967 610 aa16.72■□□□□ 0.27
CDH23-214ENST00000622827 ATF7IPQ6VMQ6 1270 aa16.72■□□□□ 0.27
CDH23-214ENST00000622827 ARFGAP3Q9NP61 516 aa16.72■□□□□ 0.27
CDH23-214ENST00000622827 EHBP1Q8NDI1 1231 aa16.72■□□□□ 0.27
CDH23-214ENST00000622827 TNPO1Q92973 898 aaKnown RBP16.72■□□□□ 0.27
CDH23-214ENST00000622827 RSPH14Q9UHP6 348 aa16.72■□□□□ 0.27
CDH23-214ENST00000622827 CKAP2LQ8IYA6 745 aa16.71■□□□□ 0.27
CDH23-214ENST00000622827 ZSCAN25Q6NSZ9 544 aa16.71■□□□□ 0.27
CDH23-214ENST00000622827 HYPKQ9NX55 129 aa16.71■□□□□ 0.27
CDH23-214ENST00000622827 DDX23Q9BUQ8 820 aaKnown RBP16.71■□□□□ 0.27
CDH23-214ENST00000622827 CCDC160A6NGH7 325 aa16.71■□□□□ 0.27
CDH23-214ENST00000622827 WDR66Q8TBY9 1149 aa16.71■□□□□ 0.27
CDH23-214ENST00000622827 PRKAR2BP31323 418 aa16.71■□□□□ 0.27
CDH23-214ENST00000622827 FKBP4Q02790 459 aaKnown RBP eCLIP16.71■□□□□ 0.26
CDH23-214ENST00000622827 CCDC150Q8NCX0 1101 aa16.71■□□□□ 0.26
CDH23-214ENST00000622827 LARP1Q6PKG0 1096 aaKnown RBP16.71■□□□□ 0.26
CDH23-214ENST00000622827 PHAXQ9H814 394 aaKnown RBP16.71■□□□□ 0.26
CDH23-214ENST00000622827 CABP2Q9NPB3 220 aa16.71■□□□□ 0.26
CDH23-214ENST00000622827 FERMT3Q86UX7 667 aa16.7■□□□□ 0.26
CDH23-214ENST00000622827 PUS7Q96PZ0 661 aaKnown RBP16.7■□□□□ 0.26
CDH23-214ENST00000622827 U3KPZ7 1027 aaPredicted RBP16.7■□□□□ 0.26
CDH23-214ENST00000622827 SLC4A2P04920 1241 aa16.7■□□□□ 0.26
CDH23-214ENST00000622827 GTPBP4Q9BZE4 634 aaKnown RBP16.7■□□□□ 0.26
CDH23-214ENST00000622827 ATP2C2O75185 946 aa16.7■□□□□ 0.26
CDH23-214ENST00000622827 SERPINA10Q9UK55 444 aa16.7■□□□□ 0.26
CDH23-214ENST00000622827 PDS5BQ9NTI5 1447 aa16.7■□□□□ 0.26
CDH23-214ENST00000622827 TMCO5BA8MYB1 307 aa16.69■□□□□ 0.26
CDH23-214ENST00000622827 SEC63Q9UGP8 760 aaKnown RBP16.69■□□□□ 0.26
CDH23-214ENST00000622827 ERICH3Q5RHP9 1530 aa16.69■□□□□ 0.26
CDH23-214ENST00000622827 CCDC6Q16204 474 aa16.69■□□□□ 0.26
CDH23-214ENST00000622827 JADE2Q9NQC1 790 aa16.69■□□□□ 0.26
CDH23-214ENST00000622827 PIBF1Q8WXW3 757 aa16.69■□□□□ 0.26
CDH23-214ENST00000622827 ARHGAP5Q13017 1502 aa16.69■□□□□ 0.26
CDH23-214ENST00000622827 NKTRP30414 1462 aaKnown RBP16.69■□□□□ 0.26
CDH23-214ENST00000622827 CAVIN2O95810 425 aa16.69■□□□□ 0.26
CDH23-214ENST00000622827 NAP1L3Q99457 506 aaPredicted RBP16.69■□□□□ 0.26
CDH23-214ENST00000622827 SRRTQ9BXP5 876 aaKnown RBP16.69■□□□□ 0.26
CDH23-214ENST00000622827 NLRP2Q9NX02 1062 aa16.69■□□□□ 0.26
CDH23-214ENST00000622827 FBF1Q8TES7 1133 aa16.69■□□□□ 0.26
CDH23-214ENST00000622827 CPSF2Q9P2I0 782 aaKnown RBP16.68■□□□□ 0.26
CDH23-214ENST00000622827 ZNF76P36508 570 aa16.68■□□□□ 0.26
CDH23-214ENST00000622827 GGNBP2Q9H3C7 697 aa16.68■□□□□ 0.26
CDH23-214ENST00000622827 HDGFL1Q5TGJ6 251 aa16.68■□□□□ 0.26
CDH23-214ENST00000622827 CEP57Q86XR8 500 aa16.68■□□□□ 0.26
CDH23-214ENST00000622827 IKBKGQ9Y6K9 419 aa16.68■□□□□ 0.26
CDH23-214ENST00000622827 ZNF526Q8TF50 670 aaPredicted RBP16.68■□□□□ 0.26
CDH23-214ENST00000622827 WDR63Q8IWG1 891 aa16.68■□□□□ 0.26
CDH23-214ENST00000622827 PPP1R14CQ8TAE6 165 aa16.68■□□□□ 0.26
CDH23-214ENST00000622827 SCLT1Q96NL6 688 aa16.68■□□□□ 0.26
CDH23-214ENST00000622827 CCDC94Q9BW85 323 aaPredicted RBP16.68■□□□□ 0.26
CDH23-214ENST00000622827 TDRD9Q8NDG6 1382 aaKnown RBP16.68■□□□□ 0.26
CDH23-214ENST00000622827 SSFA2P28290 1259 aa16.68■□□□□ 0.26
CDH23-214ENST00000622827 LRRC9Q6ZRR7 1453 aa16.67■□□□□ 0.26
CDH23-214ENST00000622827 CCDC121Q6ZUS5 278 aa16.67■□□□□ 0.26
CDH23-214ENST00000622827 DNAI2Q9GZS0 605 aa16.67■□□□□ 0.26
CDH23-214ENST00000622827 CCDC12Q8WUD4 166 aaPredicted RBP16.67■□□□□ 0.26
CDH23-214ENST00000622827 A0A1W2PRG0 241 aa16.67■□□□□ 0.26
CDH23-214ENST00000622827 CTNNA2P26232 953 aa16.66■□□□□ 0.26
CDH23-214ENST00000622827 MCM6Q14566 821 aa16.66■□□□□ 0.26
CDH23-214ENST00000622827 FERP16591 822 aa16.66■□□□□ 0.26
CDH23-214ENST00000622827 FSIP1Q8NA03 581 aa16.66■□□□□ 0.26
CDH23-214ENST00000622827 C8orf76Q96K31 380 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms