RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 BTBD11A6QL63 1104 aa18.3■□□□□ 0.52
CLTCL1-212ENST00000622493 EXOC5O00471 708 aa18.3■□□□□ 0.52
CLTCL1-212ENST00000622493 TSPYL6Q8N831 410 aa18.3■□□□□ 0.52
CLTCL1-212ENST00000622493 USP21Q9UK80 565 aa18.3■□□□□ 0.52
CLTCL1-212ENST00000622493 CCDC9Q9Y3X0 531 aaKnown RBP18.3■□□□□ 0.52
CLTCL1-212ENST00000622493 BRPF1P55201 1214 aaPredicted RBP18.29■□□□□ 0.52
CLTCL1-212ENST00000622493 DDX54Q8TDD1 881 aaKnown RBP18.29■□□□□ 0.52
CLTCL1-212ENST00000622493 KDM3BQ7LBC6 1761 aa18.29■□□□□ 0.52
CLTCL1-212ENST00000622493 TNS2Q63HR2 1409 aa18.28■□□□□ 0.52
CLTCL1-212ENST00000622493 ERVV-2B6SEH9 535 aa18.28■□□□□ 0.52
CLTCL1-212ENST00000622493 SSH1Q8WYL5 1049 aa18.28■□□□□ 0.52
CLTCL1-212ENST00000622493 SMC4Q9NTJ3 1288 aa18.28■□□□□ 0.52
CLTCL1-212ENST00000622493 ELL2O00472 640 aaPredicted RBP18.27■□□□□ 0.52
CLTCL1-212ENST00000622493 PLIN1O60240 522 aa18.26■□□□□ 0.51
CLTCL1-212ENST00000622493 NFATC2IPQ8NCF5 419 aa18.26■□□□□ 0.51
CLTCL1-212ENST00000622493 CHMP4AQ9BY43 222 aa18.26■□□□□ 0.51
CLTCL1-212ENST00000622493 CABP4P57796 275 aa18.26■□□□□ 0.51
CLTCL1-212ENST00000622493 EIF4A1P60842 406 aaKnown RBP18.26■□□□□ 0.51
CLTCL1-212ENST00000622493 IRX6P78412 446 aaPredicted RBP18.26■□□□□ 0.51
CLTCL1-212ENST00000622493 DDB1Q16531 1140 aa18.26■□□□□ 0.51
CLTCL1-212ENST00000622493 AFF2P51816 1311 aa18.25■□□□□ 0.51
CLTCL1-212ENST00000622493 KIF16BQ96L93 1317 aa18.25■□□□□ 0.51
CLTCL1-212ENST00000622493 HOXB7P09629 217 aa18.25■□□□□ 0.51
CLTCL1-212ENST00000622493 PDE3AQ14432 1141 aa18.24■□□□□ 0.51
CLTCL1-212ENST00000622493 KRT24Q2M2I5 525 aa18.24■□□□□ 0.51
CLTCL1-212ENST00000622493 BCL2L13Q9BXK5 485 aa18.24■□□□□ 0.51
CLTCL1-212ENST00000622493 CANXP27824 592 aaKnown RBP18.23■□□□□ 0.51
CLTCL1-212ENST00000622493 ZNF790Q6PG37 636 aa18.23■□□□□ 0.51
CLTCL1-212ENST00000622493 IPO8O15397 1037 aaKnown RBP18.23■□□□□ 0.51
CLTCL1-212ENST00000622493 MS4A1P11836 297 aa18.23■□□□□ 0.51
CLTCL1-212ENST00000622493 FRAT1Q92837 279 aaPredicted RBP18.23■□□□□ 0.51
CLTCL1-212ENST00000622493 ZKSCAN2Q63HK3 967 aa18.22■□□□□ 0.51
CLTCL1-212ENST00000622493 FBXO41Q8TF61 875 aa18.22■□□□□ 0.51
CLTCL1-212ENST00000622493 TRPC5Q9UL62 973 aaPredicted RBP18.22■□□□□ 0.51
CLTCL1-212ENST00000622493 HEG1Q9ULI3 1381 aa18.22■□□□□ 0.51
CLTCL1-212ENST00000622493 MRPL50Q8N5N7 158 aaKnown RBP18.21■□□□□ 0.51
CLTCL1-212ENST00000622493 ARHGAP45Q92619 1136 aa18.21■□□□□ 0.51
CLTCL1-212ENST00000622493 GJD4Q96KN9 370 aaPredicted RBP18.21■□□□□ 0.51
CLTCL1-212ENST00000622493 ATRNO75882 1429 aa18.21■□□□□ 0.51
CLTCL1-212ENST00000622493 FAM98CQ17RN3 349 aaKnown RBP18.2■□□□□ 0.5
CLTCL1-212ENST00000622493 CCDC30Q5VVM6 783 aa18.2■□□□□ 0.5
CLTCL1-212ENST00000622493 TTC5Q8N0Z6 440 aa18.2■□□□□ 0.5
CLTCL1-212ENST00000622493 KCNQ3O43525 872 aa18.2■□□□□ 0.5
CLTCL1-212ENST00000622493 ATF7IPQ6VMQ6 1270 aa18.19■□□□□ 0.5
CLTCL1-212ENST00000622493 NOB1Q9ULX3 412 aaKnown RBP18.19■□□□□ 0.5
CLTCL1-212ENST00000622493 TOGARAM1Q9Y4F4 1720 aa18.19■□□□□ 0.5
CLTCL1-212ENST00000622493 GIGYF1O75420 1035 aaPredicted RBP18.18■□□□□ 0.5
CLTCL1-212ENST00000622493 C20orf194Q5TEA3 1177 aa18.18■□□□□ 0.5
CLTCL1-212ENST00000622493 ONECUT3O60422 494 aaPredicted RBP18.18■□□□□ 0.5
CLTCL1-212ENST00000622493 SLC39A6Q13433 755 aa18.18■□□□□ 0.5
CLTCL1-212ENST00000622493 STK31Q9BXU1 1019 aa18.18■□□□□ 0.5
CLTCL1-212ENST00000622493 TMOD3Q9NYL9 352 aa18.18■□□□□ 0.5
CLTCL1-212ENST00000622493 CACNA1FO60840 1977 aa18.18■□□□□ 0.5
CLTCL1-212ENST00000622493 THSD7AQ9UPZ6 1657 aa18.17■□□□□ 0.5
CLTCL1-212ENST00000622493 GLI3P10071 1580 aa18.17■□□□□ 0.5
CLTCL1-212ENST00000622493 TRIM27P14373 513 aa18.16■□□□□ 0.5
CLTCL1-212ENST00000622493 HDGFL1Q5TGJ6 251 aa18.16■□□□□ 0.5
CLTCL1-212ENST00000622493 MARCH10Q8NA82 808 aaPredicted RBP18.16■□□□□ 0.5
CLTCL1-212ENST00000622493 FMNL2Q96PY5 1086 aa18.16■□□□□ 0.5
CLTCL1-212ENST00000622493 PPP4R2Q9NY27 417 aa18.16■□□□□ 0.5
CLTCL1-212ENST00000622493 SLC4A2P04920 1241 aa18.15■□□□□ 0.5
CLTCL1-212ENST00000622493 DZIP1LQ8IYY4 767 aaKnown RBP18.15■□□□□ 0.5
CLTCL1-212ENST00000622493 QTRT2Q9H974 415 aaKnown RBP18.15■□□□□ 0.5
CLTCL1-212ENST00000622493 PTPRCP08575 1304 aa18.15■□□□□ 0.5
CLTCL1-212ENST00000622493 PAPPAQ13219 1627 aa18.15■□□□□ 0.5
CLTCL1-212ENST00000622493 TCERG1O14776 1098 aaKnown RBP18.15■□□□□ 0.5
CLTCL1-212ENST00000622493 FTSJ3Q8IY81 847 aaKnown RBP18.15■□□□□ 0.5
CLTCL1-212ENST00000622493 EXOC6Q8TAG9 804 aa18.15■□□□□ 0.5
CLTCL1-212ENST00000622493 ZNF496Q96IT1 587 aaPredicted RBP18.15■□□□□ 0.5
CLTCL1-212ENST00000622493 CRBNQ96SW2 442 aa18.15■□□□□ 0.5
CLTCL1-212ENST00000622493 ITGB4P16144 1822 aa18.15■□□□□ 0.5
CLTCL1-212ENST00000622493 BCL9O00512 1426 aa18.14■□□□□ 0.49
CLTCL1-212ENST00000622493 SNRPA1P09661 255 aaKnown RBP18.14■□□□□ 0.49
CLTCL1-212ENST00000622493 ZNF772Q68DY9 489 aaPredicted RBP18.14■□□□□ 0.49
CLTCL1-212ENST00000622493 API5Q9BZZ5 524 aaKnown RBP18.14■□□□□ 0.49
CLTCL1-212ENST00000622493 UBR2Q8IWV8 1755 aa18.13■□□□□ 0.49
CLTCL1-212ENST00000622493 PIGBQ92521 554 aa18.13■□□□□ 0.49
CLTCL1-212ENST00000622493 A0A0G2JS52 829 aa18.12■□□□□ 0.49
CLTCL1-212ENST00000622493 AAMPQ13685 434 aa18.12■□□□□ 0.49
CLTCL1-212ENST00000622493 PANK1Q8TE04 598 aa18.12■□□□□ 0.49
CLTCL1-212ENST00000622493 EIF2S2P20042 333 aaKnown RBP18.12■□□□□ 0.49
CLTCL1-212ENST00000622493 CLUAP1Q96AJ1 413 aa18.12■□□□□ 0.49
CLTCL1-212ENST00000622493 DBF4Q9UBU7 674 aaPredicted RBP18.12■□□□□ 0.49
CLTCL1-212ENST00000622493 DOT1LQ8TEK3 1739 aa18.12■□□□□ 0.49
CLTCL1-212ENST00000622493 RLBP1P12271 317 aa18.11■□□□□ 0.49
CLTCL1-212ENST00000622493 PRIM1P49642 420 aaKnown RBP18.1■□□□□ 0.49
CLTCL1-212ENST00000622493 KCPQ6ZWJ8 1503 aa18.1■□□□□ 0.49
CLTCL1-212ENST00000622493 MVPQ14764 893 aaKnown RBP18.09■□□□□ 0.49
CLTCL1-212ENST00000622493 NECTIN2Q92692 538 aa18.09■□□□□ 0.49
CLTCL1-212ENST00000622493 TNNQ9UQP3 1299 aa18.09■□□□□ 0.49
CLTCL1-212ENST00000622493 COG6Q9Y2V7 657 aa18.09■□□□□ 0.49
CLTCL1-212ENST00000622493 ABCC4O15439 1325 aa18.09■□□□□ 0.49
CLTCL1-212ENST00000622493 VSIG10Q8N0Z9 540 aa18.09■□□□□ 0.49
CLTCL1-212ENST00000622493 SYTL4Q96C24 671 aaPredicted RBP18.09■□□□□ 0.49
CLTCL1-212ENST00000622493 ATG3Q9NT62 314 aa18.09■□□□□ 0.49
CLTCL1-212ENST00000622493 KAT6BQ8WYB5 2073 aa18.08■□□□□ 0.48
CLTCL1-212ENST00000622493 FLIIQ13045 1269 aa18.08■□□□□ 0.48
CLTCL1-212ENST00000622493 CHPF2Q9P2E5 772 aa18.08■□□□□ 0.48
CLTCL1-212ENST00000622493 DDX19BQ9UMR2 479 aa18.08■□□□□ 0.48
CLTCL1-212ENST00000622493 C5P01031 1676 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms