RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 SUPT6HQ7KZ85 1726 aaKnown RBP22.05■■□□□ 1.12
SPAST-203ENST00000615843 UBE2HP62256 183 aa22.04■■□□□ 1.12
SPAST-203ENST00000615843 ZNF830Q96NB3 372 aaPredicted RBP22.04■■□□□ 1.12
SPAST-203ENST00000615843 STX6O43752 255 aa22.04■■□□□ 1.12
SPAST-203ENST00000615843 SNW1Q13573 536 aaKnown RBP22.03■■□□□ 1.12
SPAST-203ENST00000615843 ZRSR2Q15696 482 aaKnown RBP22.03■■□□□ 1.12
SPAST-203ENST00000615843 RAB11FIP3O75154 756 aa22.03■■□□□ 1.12
SPAST-203ENST00000615843 ZNF165P49910 485 aa22.03■■□□□ 1.12
SPAST-203ENST00000615843 EIF5P55010 431 aaKnown RBP22.03■■□□□ 1.12
SPAST-203ENST00000615843 SYTL4Q96C24 671 aaPredicted RBP22.03■■□□□ 1.12
SPAST-203ENST00000615843 KRT18P05783 430 aaKnown RBP22.02■■□□□ 1.12
SPAST-203ENST00000615843 NEFHP12036 1026 aa22.02■■□□□ 1.12
SPAST-203ENST00000615843 MCM3P25205 808 aa22.02■■□□□ 1.12
SPAST-203ENST00000615843 FAM107BQ9H098 131 aa22.02■■□□□ 1.12
SPAST-203ENST00000615843 FBXO3Q9UK99 471 aa22.02■■□□□ 1.12
SPAST-203ENST00000615843 DDX54Q8TDD1 881 aaKnown RBP22.02■■□□□ 1.12
SPAST-203ENST00000615843 CTDP1Q9Y5B0 961 aaPredicted RBP22.02■■□□□ 1.12
SPAST-203ENST00000615843 SYCP1Q15431 976 aa22.01■■□□□ 1.11
SPAST-203ENST00000615843 ENOX2Q16206 610 aaKnown RBP22.01■■□□□ 1.11
SPAST-203ENST00000615843 NUP133Q8WUM0 1156 aa22.01■■□□□ 1.11
SPAST-203ENST00000615843 NACAP1Q9BZK3 213 aa22.01■■□□□ 1.11
SPAST-203ENST00000615843 SLC3A2P08195 630 aaKnown RBP22■■□□□ 1.11
SPAST-203ENST00000615843 HS1BP3Q53T59 392 aa22■■□□□ 1.11
SPAST-203ENST00000615843 STX1AQ16623 288 aa22■■□□□ 1.11
SPAST-203ENST00000615843 LMAN1P49257 510 aa22■■□□□ 1.11
SPAST-203ENST00000615843 TMC6Q7Z403 805 aa22■■□□□ 1.11
SPAST-203ENST00000615843 CCDC94Q9BW85 323 aaPredicted RBP21.99■■□□□ 1.11
SPAST-203ENST00000615843 GJB2P29033 226 aa21.99■■□□□ 1.11
SPAST-203ENST00000615843 POTEB2H3BUK9 544 aa21.99■■□□□ 1.11
SPAST-203ENST00000615843 PRG4Q92954 1404 aaPredicted RBP21.99■■□□□ 1.11
SPAST-203ENST00000615843 SNX21Q969T3 373 aa21.99■■□□□ 1.11
SPAST-203ENST00000615843 GTPBP4Q9BZE4 634 aaKnown RBP21.99■■□□□ 1.11
SPAST-203ENST00000615843 TROQ12816 1431 aaPredicted RBP21.98■■□□□ 1.11
SPAST-203ENST00000615843 FKBP4Q02790 459 aaKnown RBP eCLIP21.98■■□□□ 1.11
SPAST-203ENST00000615843 TAF4BQ92750 862 aa21.98■■□□□ 1.11
SPAST-203ENST00000615843 CCDC171Q6TFL3 1326 aa21.98■■□□□ 1.11
SPAST-203ENST00000615843 ATAD2Q6PL18 1390 aa21.98■■□□□ 1.11
SPAST-203ENST00000615843 ABTB2Q8N961 1025 aa21.98■■□□□ 1.11
SPAST-203ENST00000615843 ZNF692Q9BU19 519 aaPredicted RBP21.98■■□□□ 1.11
SPAST-203ENST00000615843 TFIP11Q9UBB9 837 aaKnown RBP21.98■■□□□ 1.11
SPAST-203ENST00000615843 CAVIN2O95810 425 aa21.98■■□□□ 1.11
SPAST-203ENST00000615843 GIMAP6Q6P9H5 292 aa21.98■■□□□ 1.11
SPAST-203ENST00000615843 WASF1Q92558 559 aa21.98■■□□□ 1.11
SPAST-203ENST00000615843 ZSCAN25Q6NSZ9 544 aa21.98■■□□□ 1.11
SPAST-203ENST00000615843 SMARCC1Q92922 1105 aaPredicted RBP21.98■■□□□ 1.11
SPAST-203ENST00000615843 LARP6Q9BRS8 491 aaKnown RBP21.98■■□□□ 1.11
SPAST-203ENST00000615843 CNNM1Q9NRU3 951 aa21.98■■□□□ 1.11
SPAST-203ENST00000615843 HDAC1Q13547 482 aaPredicted RBP21.97■■□□□ 1.11
SPAST-203ENST00000615843 INCENPQ9NQS7 918 aa21.97■■□□□ 1.11
SPAST-203ENST00000615843 RRS1Q15050 365 aaKnown RBP21.97■■□□□ 1.11
SPAST-203ENST00000615843 TTC22Q5TAA0 569 aa21.97■■□□□ 1.11
SPAST-203ENST00000615843 FSIP1Q8NA03 581 aa21.97■■□□□ 1.11
SPAST-203ENST00000615843 SEPT7Q16181 437 aaKnown RBP21.97■■□□□ 1.11
SPAST-203ENST00000615843 IMMTQ16891 758 aaKnown RBP21.97■■□□□ 1.11
SPAST-203ENST00000615843 TMX3Q96JJ7 454 aa21.96■■□□□ 1.11
SPAST-203ENST00000615843 TMX1Q9H3N1 280 aa21.96■■□□□ 1.11
SPAST-203ENST00000615843 RRAGDQ9NQL2 400 aaPredicted RBP21.96■■□□□ 1.11
SPAST-203ENST00000615843 PCDHB15Q9Y5E8 787 aa21.96■■□□□ 1.11
SPAST-203ENST00000615843 TOP2BQ02880 1626 aa21.96■■□□□ 1.11
SPAST-203ENST00000615843 HECW1Q76N89 1606 aa21.96■■□□□ 1.11
SPAST-203ENST00000615843 IBSPP21815 317 aaPredicted RBP21.96■■□□□ 1.11
SPAST-203ENST00000615843 RBM33Q96EV2 1170 aaKnown RBP21.96■■□□□ 1.11
SPAST-203ENST00000615843 NUCB1Q02818 461 aa21.96■■□□□ 1.11
SPAST-203ENST00000615843 CEP131Q9UPN4 1083 aa21.96■■□□□ 1.11
SPAST-203ENST00000615843 PRIM1P49642 420 aaKnown RBP21.95■■□□□ 1.11
SPAST-203ENST00000615843 GPATCH11Q8N954 259 aa21.95■■□□□ 1.1
SPAST-203ENST00000615843 AQRO60306 1485 aaKnown RBP eCLIP21.95■■□□□ 1.1
SPAST-203ENST00000615843 GOLGA6L9A6NEM1 432 aa21.94■■□□□ 1.1
SPAST-203ENST00000615843 KLHL10Q6JEL2 608 aa21.94■■□□□ 1.1
SPAST-203ENST00000615843 ZNF397Q8NF99 534 aaPredicted RBP21.94■■□□□ 1.1
SPAST-203ENST00000615843 BBXQ8WY36 941 aaPredicted RBP21.94■■□□□ 1.1
SPAST-203ENST00000615843 RAI14Q9P0K7 980 aa21.94■■□□□ 1.1
SPAST-203ENST00000615843 U3KPZ7 1027 aaPredicted RBP21.94■■□□□ 1.1
SPAST-203ENST00000615843 SPA17Q15506 151 aa21.94■■□□□ 1.1
SPAST-203ENST00000615843 C8orf76Q96K31 380 aa21.94■■□□□ 1.1
SPAST-203ENST00000615843 GUCY1B3Q02153 619 aa21.94■■□□□ 1.1
SPAST-203ENST00000615843 TTC12Q9H892 705 aaPredicted RBP21.94■■□□□ 1.1
SPAST-203ENST00000615843 MICALCLQ6ZW33 695 aa21.94■■□□□ 1.1
SPAST-203ENST00000615843 CCDC150Q8NCX0 1101 aa21.94■■□□□ 1.1
SPAST-203ENST00000615843 RAB3GAP1Q15042 981 aa21.93■■□□□ 1.1
SPAST-203ENST00000615843 CCDC57Q2TAC2 916 aa21.93■■□□□ 1.1
SPAST-203ENST00000615843 ZNF530Q6P9A1 599 aaPredicted RBP21.93■■□□□ 1.1
SPAST-203ENST00000615843 CCDC186Q7Z3E2 898 aa21.93■■□□□ 1.1
SPAST-203ENST00000615843 MIS18AQ9NYP9 233 aa21.93■■□□□ 1.1
SPAST-203ENST00000615843 SYNJ2O15056 1496 aa21.92■■□□□ 1.1
SPAST-203ENST00000615843 ZSCAN22P10073 491 aaPredicted RBP21.92■■□□□ 1.1
SPAST-203ENST00000615843 ZHX3Q9H4I2 956 aa21.92■■□□□ 1.1
SPAST-203ENST00000615843 NCAPD3P42695 1498 aa21.92■■□□□ 1.1
SPAST-203ENST00000615843 RNF187Q5TA31 235 aaPredicted RBP21.92■■□□□ 1.1
SPAST-203ENST00000615843 RPRD2Q5VT52 1461 aaKnown RBP21.92■■□□□ 1.1
SPAST-203ENST00000615843 SAMD1Q6SPF0 538 aaPredicted RBP21.92■■□□□ 1.1
SPAST-203ENST00000615843 MCM10Q7L590 875 aa21.92■■□□□ 1.1
SPAST-203ENST00000615843 KIF6Q6ZMV9 814 aa21.92■■□□□ 1.1
SPAST-203ENST00000615843 MYL6BP14649 208 aa21.91■■□□□ 1.1
SPAST-203ENST00000615843 IPO4Q8TEX9 1081 aaKnown RBP21.91■■□□□ 1.1
SPAST-203ENST00000615843 UBAC1Q9BSL1 405 aa21.91■■□□□ 1.1
SPAST-203ENST00000615843 BOLA2Q9H3K6 86 aa21.91■■□□□ 1.1
SPAST-203ENST00000615843 BIN1O00499 593 aa21.91■■□□□ 1.1
SPAST-203ENST00000615843 TXNDC2Q86VQ3 553 aa21.91■■□□□ 1.1
SPAST-203ENST00000615843 CPLX3Q8WVH0 158 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms