RNA–Protein interactions for RNA: ENST00000614778.4

PDCD6-212, Transcript of programmed cell death 6, humanhuman

TSL 2 BASIC

Gene PDCD6, Length 1,050 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-212ENST00000614778 ITPK1Q13572 414 aa21.03■□□□□ 0.96
PDCD6-212ENST00000614778 PHACTR3Q96KR7 559 aa21.03■□□□□ 0.96
PDCD6-212ENST00000614778 SLC4A9Q96Q91 983 aa21.03■□□□□ 0.96
PDCD6-212ENST00000614778 RNMTO43148 476 aaKnown RBP21.02■□□□□ 0.96
PDCD6-212ENST00000614778 U2AF1L5P0DN76 240 aaPredicted RBP21.02■□□□□ 0.96
PDCD6-212ENST00000614778 PRKAR2BP31323 418 aa21.02■□□□□ 0.96
PDCD6-212ENST00000614778 U2AF1Q01081 240 aaKnown RBP eCLIP21.02■□□□□ 0.96
PDCD6-212ENST00000614778 AMIGO3Q86WK7 504 aa21.02■□□□□ 0.96
PDCD6-212ENST00000614778 LINC00116Q8NCU8 138 aa21.02■□□□□ 0.96
PDCD6-212ENST00000614778 NUDCQ9Y266 331 aa21.02■□□□□ 0.96
PDCD6-212ENST00000614778 MTFR1LQ9H019 292 aa21.01■□□□□ 0.95
PDCD6-212ENST00000614778 MRC1P22897 1456 aa21.01■□□□□ 0.95
PDCD6-212ENST00000614778 SMIM5Q71RC9 77 aa21■□□□□ 0.95
PDCD6-212ENST00000614778 SGIP1Q9BQI5 828 aa21■□□□□ 0.95
PDCD6-212ENST00000614778 UBR3Q6ZT12 1888 aa20.99■□□□□ 0.95
PDCD6-212ENST00000614778 ATP6V1AP38606 617 aa20.99■□□□□ 0.95
PDCD6-212ENST00000614778 RALBP1Q15311 655 aa20.99■□□□□ 0.95
PDCD6-212ENST00000614778 COL23A1Q86Y22 540 aaPredicted RBP20.99■□□□□ 0.95
PDCD6-212ENST00000614778 SLC52A2Q9HAB3 445 aa20.99■□□□□ 0.95
PDCD6-212ENST00000614778 RBM42Q9BTD8 480 aaKnown RBP20.98■□□□□ 0.95
PDCD6-212ENST00000614778 ZNF831Q5JPB2 1677 aa20.98■□□□□ 0.95
PDCD6-212ENST00000614778 MAP3K5Q99683 1374 aa20.97■□□□□ 0.95
PDCD6-212ENST00000614778 GAS2L2Q8NHY3 880 aa20.97■□□□□ 0.95
PDCD6-212ENST00000614778 PPP1R1BQ9UD71 204 aaPredicted RBP20.97■□□□□ 0.95
PDCD6-212ENST00000614778 COL24A1Q17RW2 1714 aa20.97■□□□□ 0.95
PDCD6-212ENST00000614778 COL5A3P25940 1745 aaPredicted RBP20.96■□□□□ 0.95
PDCD6-212ENST00000614778 PTCD1O75127 700 aaKnown RBP20.96■□□□□ 0.95
PDCD6-212ENST00000614778 FCHSD2O94868 740 aa20.96■□□□□ 0.95
PDCD6-212ENST00000614778 IL17REQ8NFR9 667 aa20.96■□□□□ 0.95
PDCD6-212ENST00000614778 GNAT3A8MTJ3 354 aa20.95■□□□□ 0.94
PDCD6-212ENST00000614778 SLC16A10Q8TF71 515 aa20.95■□□□□ 0.94
PDCD6-212ENST00000614778 AK7Q96M32 723 aa20.95■□□□□ 0.94
PDCD6-212ENST00000614778 MSH5O43196 834 aa20.94■□□□□ 0.94
PDCD6-212ENST00000614778 SLC39A6Q13433 755 aa20.94■□□□□ 0.94
PDCD6-212ENST00000614778 MYH14Q7Z406 1995 aaKnown RBP20.94■□□□□ 0.94
PDCD6-212ENST00000614778 TJP1Q07157 1748 aa20.93■□□□□ 0.94
PDCD6-212ENST00000614778 SIPA1L3O60292 1781 aaPredicted RBP20.93■□□□□ 0.94
PDCD6-212ENST00000614778 PHF14O94880 888 aa20.92■□□□□ 0.94
PDCD6-212ENST00000614778 HMGB2P26583 209 aaKnown RBP20.92■□□□□ 0.94
PDCD6-212ENST00000614778 MYBBP1AQ9BQG0 1328 aaKnown RBP20.92■□□□□ 0.94
PDCD6-212ENST00000614778 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.91■□□□□ 0.94
PDCD6-212ENST00000614778 GNPATO15228 680 aa20.91■□□□□ 0.94
PDCD6-212ENST00000614778 KCPQ6ZWJ8 1503 aa20.91■□□□□ 0.94
PDCD6-212ENST00000614778 CICQ96RK0 1608 aaPredicted RBP20.9■□□□□ 0.94
PDCD6-212ENST00000614778 CEMIPQ8WUJ3 1361 aa20.9■□□□□ 0.94
PDCD6-212ENST00000614778 MSL1Q68DK7 614 aa20.9■□□□□ 0.94
PDCD6-212ENST00000614778 PLEKHF1Q96S99 279 aa20.9■□□□□ 0.94
PDCD6-212ENST00000614778 UBR2Q8IWV8 1755 aa20.9■□□□□ 0.94
PDCD6-212ENST00000614778 FLAD1Q8NFF5 587 aa20.89■□□□□ 0.93
PDCD6-212ENST00000614778 ARXQ96QS3 562 aa20.89■□□□□ 0.93
PDCD6-212ENST00000614778 PRKRIP1Q9H875 184 aaPredicted RBP20.89■□□□□ 0.93
PDCD6-212ENST00000614778 CNTNAP4Q9C0A0 1308 aa20.88■□□□□ 0.93
PDCD6-212ENST00000614778 SSFA2P28290 1259 aa20.88■□□□□ 0.93
PDCD6-212ENST00000614778 FHDC1Q9C0D6 1143 aaPredicted RBP20.88■□□□□ 0.93
PDCD6-212ENST00000614778 DLG5Q8TDM6 1919 aa20.88■□□□□ 0.93
PDCD6-212ENST00000614778 TEFQ10587 303 aa20.87■□□□□ 0.93
PDCD6-212ENST00000614778 DCTN1Q14203 1278 aa20.87■□□□□ 0.93
PDCD6-212ENST00000614778 RC3H1Q5TC82 1133 aaKnown RBP20.87■□□□□ 0.93
PDCD6-212ENST00000614778 DNAJC10Q8IXB1 793 aa20.87■□□□□ 0.93
PDCD6-212ENST00000614778 ZNF316A6NFI3 1004 aaPredicted RBP20.86■□□□□ 0.93
PDCD6-212ENST00000614778 MCM10Q7L590 875 aa20.86■□□□□ 0.93
PDCD6-212ENST00000614778 CRKLP46109 303 aaKnown RBP20.85■□□□□ 0.93
PDCD6-212ENST00000614778 POLD1P28340 1107 aa20.84■□□□□ 0.93
PDCD6-212ENST00000614778 SYT17Q9BSW7 474 aa20.84■□□□□ 0.93
PDCD6-212ENST00000614778 RTCBQ9Y3I0 505 aaKnown RBP20.84■□□□□ 0.93
PDCD6-212ENST00000614778 KCNQ3O43525 872 aa20.83■□□□□ 0.93
PDCD6-212ENST00000614778 RPS6KA4O75676 772 aa20.83■□□□□ 0.93
PDCD6-212ENST00000614778 INTS5Q6P9B9 1019 aaKnown RBP20.83■□□□□ 0.93
PDCD6-212ENST00000614778 C4AP0C0L4 1744 aa20.83■□□□□ 0.92
PDCD6-212ENST00000614778 ZNF790Q6PG37 636 aa20.82■□□□□ 0.92
PDCD6-212ENST00000614778 RTF1Q92541 710 aaKnown RBP20.82■□□□□ 0.92
PDCD6-212ENST00000614778 ARHGEF1Q92888 912 aaKnown RBP20.82■□□□□ 0.92
PDCD6-212ENST00000614778 ZNF496Q96IT1 587 aaPredicted RBP20.82■□□□□ 0.92
PDCD6-212ENST00000614778 CYP19A1P11511 503 aaPredicted RBP20.81■□□□□ 0.92
PDCD6-212ENST00000614778 NFE2L2Q16236 605 aa20.81■□□□□ 0.92
PDCD6-212ENST00000614778 TRAPPC3LQ5T215 181 aa20.81■□□□□ 0.92
PDCD6-212ENST00000614778 TTC5Q8N0Z6 440 aa20.81■□□□□ 0.92
PDCD6-212ENST00000614778 BTBD11A6QL63 1104 aa20.8■□□□□ 0.92
PDCD6-212ENST00000614778 HTATSF1O43719 755 aaKnown RBP20.8■□□□□ 0.92
PDCD6-212ENST00000614778 NEFMP07197 916 aa20.79■□□□□ 0.92
PDCD6-212ENST00000614778 VSIG10Q8N0Z9 540 aa20.79■□□□□ 0.92
PDCD6-212ENST00000614778 KLHL34Q8N239 644 aa20.79■□□□□ 0.92
PDCD6-212ENST00000614778 CCDC87Q9NVE4 849 aa20.79■□□□□ 0.92
PDCD6-212ENST00000614778 HEG1Q9ULI3 1381 aa20.79■□□□□ 0.92
PDCD6-212ENST00000614778 MAPK8IP3Q9UPT6 1336 aa20.78■□□□□ 0.92
PDCD6-212ENST00000614778 ADRA2BP18089 450 aa20.78■□□□□ 0.92
PDCD6-212ENST00000614778 THUMPD2Q9BTF0 503 aaKnown RBP20.78■□□□□ 0.92
PDCD6-212ENST00000614778 CCDC146Q8IYE0 955 aa20.77■□□□□ 0.92
PDCD6-212ENST00000614778 PNNQ9H307 717 aaKnown RBP20.77■□□□□ 0.92
PDCD6-212ENST00000614778 ZBTB1Q9Y2K1 713 aa20.77■□□□□ 0.92
PDCD6-212ENST00000614778 NLGN2Q8NFZ4 835 aa20.76■□□□□ 0.91
PDCD6-212ENST00000614778 SRP68Q9UHB9 627 aaKnown RBP20.76■□□□□ 0.91
PDCD6-212ENST00000614778 ADAMTS8Q9UP79 889 aa20.76■□□□□ 0.91
PDCD6-212ENST00000614778 GOLGB1Q14789 3259 aaKnown RBP20.76■□□□□ 0.91
PDCD6-212ENST00000614778 SOS1Q07889 1333 aaPredicted RBP20.76■□□□□ 0.91
PDCD6-212ENST00000614778 GYS1P13807 737 aa20.75■□□□□ 0.91
PDCD6-212ENST00000614778 RFC4P35249 363 aa20.75■□□□□ 0.91
PDCD6-212ENST00000614778 FMNL2Q96PY5 1086 aa20.75■□□□□ 0.91
PDCD6-212ENST00000614778 MIS18AQ9NYP9 233 aa20.75■□□□□ 0.91
PDCD6-212ENST00000614778 UTRNP46939 3433 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms