RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 LRRIQ1Q96JM4 1722 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 SPDYE4A6NLX3 237 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 ATP5J2-PTCD1G3V325 749 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 RAB11FIP3O75154 756 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 HCLS1P14317 486 aaPredicted RBP4.51□□□□□ -1.69
RNF38-210ENST00000611646 GJB2P29033 226 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 PRIM1P49642 420 aaKnown RBP4.51□□□□□ -1.69
RNF38-210ENST00000611646 HDAC1Q13547 482 aaPredicted RBP4.51□□□□□ -1.69
RNF38-210ENST00000611646 PPP1R42Q7Z4L9 355 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 PROSER2Q86WR7 435 aaPredicted RBP4.51□□□□□ -1.69
RNF38-210ENST00000611646 NUP133Q8WUM0 1156 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 CNNM1Q9NRU3 951 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 TRMT1Q9NXH9 659 aaKnown RBP4.51□□□□□ -1.69
RNF38-210ENST00000611646 CD109Q6YHK3 1445 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 FANCAO15360 1455 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 PI4KAP2A4QPH2 592 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 SERPINC1P01008 464 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 PI4KAP1Q8N8J0 262 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 POLKQ9UBT6 870 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 CTTNBP2Q8WZ74 1663 aa4.5□□□□□ -1.69
RNF38-210ENST00000611646 ERICH4A6NGS2 130 aa4.5□□□□□ -1.69
RNF38-210ENST00000611646 PATL2C9JE40 543 aaKnown RBP4.5□□□□□ -1.69
RNF38-210ENST00000611646 TSR1Q2NL82 804 aaKnown RBP4.5□□□□□ -1.69
RNF38-210ENST00000611646 C16orf45Q96MC5 204 aaPredicted RBP4.5□□□□□ -1.69
RNF38-210ENST00000611646 PA2G4Q9UQ80 394 aaKnown RBP4.5□□□□□ -1.69
RNF38-210ENST00000611646 GOLGB1Q14789 3259 aaKnown RBP4.5□□□□□ -1.69
RNF38-210ENST00000611646 BIN1O00499 593 aa4.5□□□□□ -1.69
RNF38-210ENST00000611646 LETM1O95202 739 aaPredicted RBP4.5□□□□□ -1.69
RNF38-210ENST00000611646 ADCY5O95622 1261 aa4.5□□□□□ -1.69
RNF38-210ENST00000611646 NAP1L1P55209 391 aaKnown RBP4.5□□□□□ -1.69
RNF38-210ENST00000611646 OLFM4Q6UX06 510 aa4.5□□□□□ -1.69
RNF38-210ENST00000611646 CCDC144CPQ8IYA2 1237 aa4.5□□□□□ -1.69
RNF38-210ENST00000611646 ZBTB40Q9NUA8 1239 aa4.5□□□□□ -1.69
RNF38-210ENST00000611646 MAP3K2Q9Y2U5 619 aa4.5□□□□□ -1.69
RNF38-210ENST00000611646 A2MP01023 1474 aa4.5□□□□□ -1.69
RNF38-210ENST00000611646 ACEP12821 1306 aa4.5□□□□□ -1.69
RNF38-210ENST00000611646 TPM1P09493 284 aa4.5□□□□□ -1.69
RNF38-210ENST00000611646 PDCP20941 246 aa4.5□□□□□ -1.69
RNF38-210ENST00000611646 SAFBQ15424 915 aaKnown RBP eCLIP4.5□□□□□ -1.69
RNF38-210ENST00000611646 TOM1L2Q6ZVM7 507 aa4.5□□□□□ -1.69
RNF38-210ENST00000611646 ERC1Q8IUD2 1116 aa4.5□□□□□ -1.69
RNF38-210ENST00000611646 KIF1BPQ96EK5 621 aa4.5□□□□□ -1.69
RNF38-210ENST00000611646 NAT10Q9H0A0 1025 aaKnown RBP4.5□□□□□ -1.69
RNF38-210ENST00000611646 SNRKQ9NRH2 765 aa4.5□□□□□ -1.69
RNF38-210ENST00000611646 WDR62O43379 1518 aa4.5□□□□□ -1.69
RNF38-210ENST00000611646 VAMP4O75379 141 aa4.5□□□□□ -1.69
RNF38-210ENST00000611646 TATP17735 454 aaPredicted RBP4.5□□□□□ -1.69
RNF38-210ENST00000611646 HAND2P61296 217 aa4.5□□□□□ -1.69
RNF38-210ENST00000611646 G2E3Q7L622 706 aa4.5□□□□□ -1.69
RNF38-210ENST00000611646 CHPF2Q9P2E5 772 aa4.5□□□□□ -1.69
RNF38-210ENST00000611646 AMOTL2Q9Y2J4 779 aa4.5□□□□□ -1.69
RNF38-210ENST00000611646 IDH1O75874 414 aaKnown RBP4.49□□□□□ -1.69
RNF38-210ENST00000611646 PDE1AP54750 535 aa4.49□□□□□ -1.69
RNF38-210ENST00000611646 MAP3K11Q16584 847 aa4.49□□□□□ -1.69
RNF38-210ENST00000611646 SLC4A8Q2Y0W8 1093 aa4.49□□□□□ -1.69
RNF38-210ENST00000611646 LRRFIP1Q32MZ4 808 aaKnown RBP4.49□□□□□ -1.69
RNF38-210ENST00000611646 HSP90AA4PQ58FG1 418 aa4.49□□□□□ -1.69
RNF38-210ENST00000611646 USP48Q86UV5 1035 aa4.49□□□□□ -1.69
RNF38-210ENST00000611646 CCDC112Q8NEF3 446 aa4.49□□□□□ -1.69
RNF38-210ENST00000611646 ZHX1Q9UKY1 873 aaPredicted RBP4.49□□□□□ -1.69
RNF38-210ENST00000611646 A0A1W2PP64 1363 aa4.49□□□□□ -1.69
RNF38-210ENST00000611646 RNF123Q5XPI4 1314 aa4.49□□□□□ -1.69
RNF38-210ENST00000611646 SLC39A6Q13433 755 aa4.49□□□□□ -1.69
RNF38-210ENST00000611646 EIF4A2Q14240 407 aaKnown RBP4.49□□□□□ -1.69
RNF38-210ENST00000611646 CCDC158Q5M9N0 1113 aa4.49□□□□□ -1.69
RNF38-210ENST00000611646 DHX37Q8IY37 1157 aaKnown RBP4.49□□□□□ -1.69
RNF38-210ENST00000611646 DNAAF4Q8WXU2 420 aa4.49□□□□□ -1.69
RNF38-210ENST00000611646 TTC12Q9H892 705 aaPredicted RBP4.49□□□□□ -1.69
RNF38-210ENST00000611646 STX6O43752 255 aa4.49□□□□□ -1.69
RNF38-210ENST00000611646 MTHFSDQ2M296 383 aaKnown RBP4.49□□□□□ -1.69
RNF38-210ENST00000611646 KLHL40Q2TBA0 621 aa4.49□□□□□ -1.69
RNF38-210ENST00000611646 PLEKHM2Q8IWE5 1019 aa4.49□□□□□ -1.69
RNF38-210ENST00000611646 TRIM35Q9UPQ4 493 aa4.49□□□□□ -1.69
RNF38-210ENST00000611646 KDM5BQ9UGL1 1544 aa4.49□□□□□ -1.69
RNF38-210ENST00000611646 ABCC11Q96J66 1382 aa4.49□□□□□ -1.69
RNF38-210ENST00000611646 HIP1O00291 1037 aa4.49□□□□□ -1.69
RNF38-210ENST00000611646 POLR3DP05423 398 aaPredicted RBP4.49□□□□□ -1.69
RNF38-210ENST00000611646 CCDC57Q2TAC2 916 aa4.49□□□□□ -1.69
RNF38-210ENST00000611646 CCDC183Q5T5S1 534 aa4.49□□□□□ -1.69
RNF38-210ENST00000611646 BICDL1Q6ZP65 573 aa4.49□□□□□ -1.69
RNF38-210ENST00000611646 C17orf53Q8N3J3 647 aaPredicted RBP4.49□□□□□ -1.69
RNF38-210ENST00000611646 TRERF1Q96PN7 1200 aa4.49□□□□□ -1.69
RNF38-210ENST00000611646 LIMCH1Q9UPQ0 1083 aa4.49□□□□□ -1.69
RNF38-210ENST00000611646 COL17A1Q9UMD9 1497 aaPredicted RBP4.49□□□□□ -1.69
RNF38-210ENST00000611646 RRP9O43818 475 aaKnown RBP4.48□□□□□ -1.69
RNF38-210ENST00000611646 GLRX3O76003 335 aaKnown RBP4.48□□□□□ -1.69
RNF38-210ENST00000611646 HSP90AB3PQ58FF7 597 aa4.48□□□□□ -1.69
RNF38-210ENST00000611646 CEP85Q6P2H3 762 aa4.48□□□□□ -1.69
RNF38-210ENST00000611646 CHST3Q7LGC8 479 aa4.48□□□□□ -1.69
RNF38-210ENST00000611646 LRRC59Q96AG4 307 aaKnown RBP4.48□□□□□ -1.69
RNF38-210ENST00000611646 ZNF396Q96N95 335 aaPredicted RBP4.48□□□□□ -1.69
RNF38-210ENST00000611646 ZBTB3Q9H5J0 574 aa4.48□□□□□ -1.69
RNF38-210ENST00000611646 PHAXQ9H814 394 aaKnown RBP4.48□□□□□ -1.69
RNF38-210ENST00000611646 IGSF3O75054 1194 aa4.48□□□□□ -1.69
RNF38-210ENST00000611646 DNM1Q05193 864 aaKnown RBP4.48□□□□□ -1.69
RNF38-210ENST00000611646 SPATA31E1Q6ZUB1 1445 aa4.48□□□□□ -1.69
RNF38-210ENST00000611646 DDX46Q7L014 1031 aaKnown RBP4.48□□□□□ -1.69
RNF38-210ENST00000611646 TBC1D2BQ9UPU7 963 aa4.48□□□□□ -1.69
RNF38-210ENST00000611646 ANKRD36BQ8N2N9 1353 aa4.48□□□□□ -1.69
RNF38-210ENST00000611646 GOLIM4O00461 696 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms